RNA–Protein interactions for RNA: ENST00000381285.8

ITSN1-204, Transcript of intersectin 1, humanhuman

TSL 5 BASIC

Gene ITSN1, Length 6,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-204ENST00000381285 CAMK4Q16566 473 aa18.05■□□□□ 0.48
ITSN1-204ENST00000381285 FAM43AQ8N2R8 423 aa18.05■□□□□ 0.48
ITSN1-204ENST00000381285 RAB11FIP4Q86YS3 637 aa18.04■□□□□ 0.48
ITSN1-204ENST00000381285 MACROD2A1Z1Q3 448 aa18.04■□□□□ 0.48
ITSN1-204ENST00000381285 SPTY2D1Q68D10 685 aaPredicted RBP18.04■□□□□ 0.48
ITSN1-204ENST00000381285 CCDC191Q8NCU4 936 aa18.04■□□□□ 0.48
ITSN1-204ENST00000381285 STAC3Q96MF2 364 aa18.04■□□□□ 0.48
ITSN1-204ENST00000381285 ANKRD18AQ8IVF6 992 aa18.04■□□□□ 0.48
ITSN1-204ENST00000381285 LARP6Q9BRS8 491 aaKnown RBP18.04■□□□□ 0.48
ITSN1-204ENST00000381285 PHF8Q9UPP1 1060 aa18.04■□□□□ 0.48
ITSN1-204ENST00000381285 AKAP2Q9Y2D5 859 aa18.04■□□□□ 0.48
ITSN1-204ENST00000381285 DDX46Q7L014 1031 aaKnown RBP18.03■□□□□ 0.48
ITSN1-204ENST00000381285 ERCC4Q92889 916 aaPredicted RBP18.03■□□□□ 0.48
ITSN1-204ENST00000381285 SNRKQ9NRH2 765 aa18.03■□□□□ 0.48
ITSN1-204ENST00000381285 ANKRD18BA2A2Z9 1011 aa18.03■□□□□ 0.48
ITSN1-204ENST00000381285 RABEP1Q15276 862 aa18.03■□□□□ 0.48
ITSN1-204ENST00000381285 FERMT3Q86UX7 667 aa18.03■□□□□ 0.48
ITSN1-204ENST00000381285 CUX1P39880 1505 aa18.03■□□□□ 0.48
ITSN1-204ENST00000381285 LUC7LQ9NQ29 371 aaKnown RBP18.03■□□□□ 0.48
ITSN1-204ENST00000381285 PPP6R1Q9UPN7 881 aa18.03■□□□□ 0.48
ITSN1-204ENST00000381285 TAF7Q15545 349 aaPredicted RBP18.03■□□□□ 0.48
ITSN1-204ENST00000381285 NESP48681 1621 aa18.02■□□□□ 0.48
ITSN1-204ENST00000381285 GOLGA6L10A6NI86 522 aa18.02■□□□□ 0.48
ITSN1-204ENST00000381285 TRAK2O60296 914 aa18.02■□□□□ 0.48
ITSN1-204ENST00000381285 LETM1O95202 739 aaPredicted RBP18.02■□□□□ 0.48
ITSN1-204ENST00000381285 IQSEC3Q9UPP2 1182 aaPredicted RBP18.02■□□□□ 0.48
ITSN1-204ENST00000381285 PRPF40BQ6NWY9 871 aaKnown RBP18.02■□□□□ 0.48
ITSN1-204ENST00000381285 POTEJP0CG39 1038 aa18.01■□□□□ 0.47
ITSN1-204ENST00000381285 MAP3K12Q12852 859 aa18.01■□□□□ 0.47
ITSN1-204ENST00000381285 ATF7IPQ6VMQ6 1270 aa18.01■□□□□ 0.47
ITSN1-204ENST00000381285 KIAA1328Q86T90 577 aa18.01■□□□□ 0.47
ITSN1-204ENST00000381285 CTNNBL1Q8WYA6 563 aaPredicted RBP18.01■□□□□ 0.47
ITSN1-204ENST00000381285 GBP2P32456 591 aaPredicted RBP18.01■□□□□ 0.47
ITSN1-204ENST00000381285 ST5P78524 1137 aa18.01■□□□□ 0.47
ITSN1-204ENST00000381285 CHD1LQ86WJ1 897 aa18.01■□□□□ 0.47
ITSN1-204ENST00000381285 C9orf84Q5VXU9 1444 aa18.01■□□□□ 0.47
ITSN1-204ENST00000381285 COMMD10Q9Y6G5 202 aa18.01■□□□□ 0.47
ITSN1-204ENST00000381285 CCDC61Q9Y6R9 512 aa18.01■□□□□ 0.47
ITSN1-204ENST00000381285 CFTRP13569 1480 aa18.01■□□□□ 0.47
ITSN1-204ENST00000381285 MYO1BO43795 1136 aa18.01■□□□□ 0.47
ITSN1-204ENST00000381285 KRT85P78386 507 aa18.01■□□□□ 0.47
ITSN1-204ENST00000381285 AEBP1Q8IUX7 1158 aa18.01■□□□□ 0.47
ITSN1-204ENST00000381285 MMRN2Q9H8L6 949 aa18.01■□□□□ 0.47
ITSN1-204ENST00000381285 GRIN2BQ13224 1484 aa18■□□□□ 0.47
ITSN1-204ENST00000381285 PLS1Q14651 629 aa18■□□□□ 0.47
ITSN1-204ENST00000381285 NBPF6Q5VWK0 638 aa18■□□□□ 0.47
ITSN1-204ENST00000381285 LARP1Q6PKG0 1096 aaKnown RBP18■□□□□ 0.47
ITSN1-204ENST00000381285 NBPF5PQ86XG9 351 aaPredicted RBP18■□□□□ 0.47
ITSN1-204ENST00000381285 NBPF4Q96M43 638 aa18■□□□□ 0.47
ITSN1-204ENST00000381285 PDZRN4Q6ZMN7 1036 aaPredicted RBP18■□□□□ 0.47
ITSN1-204ENST00000381285 A0A087WZG4 1122 aa18■□□□□ 0.47
ITSN1-204ENST00000381285 PICALMQ13492 652 aa18■□□□□ 0.47
ITSN1-204ENST00000381285 PUF60Q9UHX1 559 aaKnown RBP18■□□□□ 0.47
ITSN1-204ENST00000381285 CCDC83Q8IWF9 413 aa17.99■□□□□ 0.47
ITSN1-204ENST00000381285 CCDC112Q8NEF3 446 aa17.99■□□□□ 0.47
ITSN1-204ENST00000381285 PPP1R12BO60237 982 aaPredicted RBP17.99■□□□□ 0.47
ITSN1-204ENST00000381285 CTCFLQ8NI51 663 aaPredicted RBP17.99■□□□□ 0.47
ITSN1-204ENST00000381285 BIN2Q9UBW5 565 aaPredicted RBP17.99■□□□□ 0.47
ITSN1-204ENST00000381285 MAP3K9P80192 1104 aa17.99■□□□□ 0.47
ITSN1-204ENST00000381285 WASF1Q92558 559 aa17.99■□□□□ 0.47
ITSN1-204ENST00000381285 EMILIN1Q9Y6C2 1016 aa17.99■□□□□ 0.47
ITSN1-204ENST00000381285 USP8P40818 1118 aa17.99■□□□□ 0.47
ITSN1-204ENST00000381285 MCM2P49736 904 aa17.99■□□□□ 0.47
ITSN1-204ENST00000381285 NLRP5P59047 1200 aa17.99■□□□□ 0.47
ITSN1-204ENST00000381285 CABP5Q9NP86 173 aa17.98■□□□□ 0.47
ITSN1-204ENST00000381285 NFE2L2Q16236 605 aa17.98■□□□□ 0.47
ITSN1-204ENST00000381285 TMX1Q9H3N1 280 aa17.98■□□□□ 0.47
ITSN1-204ENST00000381285 CCDC192P0DO97 292 aa17.98■□□□□ 0.47
ITSN1-204ENST00000381285 VEZTQ9HBM0 779 aa17.98■□□□□ 0.47
ITSN1-204ENST00000381285 NSD3Q9BZ95 1437 aa17.98■□□□□ 0.47
ITSN1-204ENST00000381285 TMEM57Q8N5G2 664 aa17.97■□□□□ 0.47
ITSN1-204ENST00000381285 CCT2P78371 535 aaKnown RBP17.97■□□□□ 0.47
ITSN1-204ENST00000381285 SLC12A7Q9Y666 1083 aa17.97■□□□□ 0.47
ITSN1-204ENST00000381285 FILIP1Q7Z7B0 1213 aa17.97■□□□□ 0.47
ITSN1-204ENST00000381285 ZNF354CQ86Y25 554 aa17.97■□□□□ 0.47
ITSN1-204ENST00000381285 CCDC113Q9H0I3 377 aa17.97■□□□□ 0.47
ITSN1-204ENST00000381285 ATP6V1AP38606 617 aa17.97■□□□□ 0.47
ITSN1-204ENST00000381285 CKAP2LQ8IYA6 745 aa17.97■□□□□ 0.47
ITSN1-204ENST00000381285 BRD4O60885 1362 aaPredicted RBP17.97■□□□□ 0.47
ITSN1-204ENST00000381285 CCDC150Q8NCX0 1101 aa17.96■□□□□ 0.47
ITSN1-204ENST00000381285 IFIT3O14879 490 aaKnown RBP17.96■□□□□ 0.47
ITSN1-204ENST00000381285 HAND2P61296 217 aa17.96■□□□□ 0.47
ITSN1-204ENST00000381285 MVPQ14764 893 aaKnown RBP17.96■□□□□ 0.47
ITSN1-204ENST00000381285 DNAI2Q9GZS0 605 aa17.96■□□□□ 0.47
ITSN1-204ENST00000381285 IQCA1Q86XH1 822 aa17.96■□□□□ 0.47
ITSN1-204ENST00000381285 TAF4BQ92750 862 aa17.96■□□□□ 0.47
ITSN1-204ENST00000381285 FERMT2Q96AC1 680 aa17.96■□□□□ 0.47
ITSN1-204ENST00000381285 ZNF408Q9H9D4 720 aa17.96■□□□□ 0.47
ITSN1-204ENST00000381285 ZNF213O14771 459 aa17.95■□□□□ 0.46
ITSN1-204ENST00000381285 SLF2Q8IX21 1173 aa17.95■□□□□ 0.46
ITSN1-204ENST00000381285 NAIPQ13075 1403 aa17.95■□□□□ 0.46
ITSN1-204ENST00000381285 ANXA1P04083 346 aa17.95■□□□□ 0.46
ITSN1-204ENST00000381285 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.95■□□□□ 0.46
ITSN1-204ENST00000381285 JAKMIP3Q5VZ66 844 aa17.95■□□□□ 0.46
ITSN1-204ENST00000381285 LDHAL6AQ6ZMR3 332 aa17.95■□□□□ 0.46
ITSN1-204ENST00000381285 UPF3BQ9BZI7 483 aaKnown RBP17.95■□□□□ 0.46
ITSN1-204ENST00000381285 MAP3K2Q9Y2U5 619 aa17.95■□□□□ 0.46
ITSN1-204ENST00000381285 WDR33Q9C0J8 1336 aaKnown RBP17.95■□□□□ 0.46
ITSN1-204ENST00000381285 MBD3O95983 291 aa17.94■□□□□ 0.46
ITSN1-204ENST00000381285 CALRP27797 417 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms