RNA–Protein interactions for RNA: ENST00000380693.7

MSL3-206, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-206ENST00000380693 SLC4A10Q6U841 1118 aa9.41□□□□□ -0.9
MSL3-206ENST00000380693 RBM42Q9BTD8 480 aaKnown RBP9.41□□□□□ -0.9
MSL3-206ENST00000380693 MED1Q15648 1581 aaPredicted RBP9.4□□□□□ -0.9
MSL3-206ENST00000380693 NFAT5O94916 1531 aa9.4□□□□□ -0.9
MSL3-206ENST00000380693 PHRF1Q9P1Y6 1649 aaKnown RBP9.4□□□□□ -0.9
MSL3-206ENST00000380693 GOLGA6L3A6NEY3 463 aa9.4□□□□□ -0.9
MSL3-206ENST00000380693 SMARCA5O60264 1052 aaPredicted RBP9.4□□□□□ -0.9
MSL3-206ENST00000380693 SKOR2Q2VWA4 1001 aaPredicted RBP9.4□□□□□ -0.9
MSL3-206ENST00000380693 IP6K1Q92551 441 aa9.4□□□□□ -0.9
MSL3-206ENST00000380693 PHF8Q9UPP1 1060 aa9.4□□□□□ -0.9
MSL3-206ENST00000380693 CHD2O14647 1828 aaKnown RBP9.4□□□□□ -0.91
MSL3-206ENST00000380693 HSP90AA1P07900 732 aaKnown RBP9.39□□□□□ -0.91
MSL3-206ENST00000380693 HOXB7P09629 217 aa9.39□□□□□ -0.91
MSL3-206ENST00000380693 ATP8B2P98198 1209 aa9.39□□□□□ -0.91
MSL3-206ENST00000380693 FKBP5Q13451 457 aaPredicted RBP9.39□□□□□ -0.91
MSL3-206ENST00000380693 CHMP4AQ9BY43 222 aa9.39□□□□□ -0.91
MSL3-206ENST00000380693 ERC2O15083 957 aa9.39□□□□□ -0.91
MSL3-206ENST00000380693 IBTKQ9P2D0 1353 aaPredicted RBP9.39□□□□□ -0.91
MSL3-206ENST00000380693 FAM43AQ8N2R8 423 aa9.38□□□□□ -0.91
MSL3-206ENST00000380693 LRRCC1Q9C099 1032 aa9.38□□□□□ -0.91
MSL3-206ENST00000380693 ADGRL3Q9HAR2 1447 aa9.38□□□□□ -0.91
MSL3-206ENST00000380693 ANKLE2Q86XL3 938 aa9.38□□□□□ -0.91
MSL3-206ENST00000380693 SRCIN1Q9C0H9 1055 aa9.38□□□□□ -0.91
MSL3-206ENST00000380693 STAP2Q9UGK3 403 aa9.38□□□□□ -0.91
MSL3-206ENST00000380693 ZNF142P52746 1687 aaPredicted RBP9.38□□□□□ -0.91
MSL3-206ENST00000380693 AOX1Q06278 1338 aa9.38□□□□□ -0.91
MSL3-206ENST00000380693 XRCC6P12956 609 aaKnown RBP eCLIP9.37□□□□□ -0.91
MSL3-206ENST00000380693 NUTM2GQ5VZR2 741 aa9.37□□□□□ -0.91
MSL3-206ENST00000380693 KCNH5Q8NCM2 988 aa9.37□□□□□ -0.91
MSL3-206ENST00000380693 CWC22Q9HCG8 908 aaKnown RBP9.37□□□□□ -0.91
MSL3-206ENST00000380693 NCAPD2Q15021 1401 aa9.37□□□□□ -0.91
MSL3-206ENST00000380693 LTN1O94822 1766 aa9.37□□□□□ -0.91
MSL3-206ENST00000380693 TUBGCP6Q96RT7 1819 aa9.37□□□□□ -0.91
MSL3-206ENST00000380693 APBB1O00213 710 aa9.37□□□□□ -0.91
MSL3-206ENST00000380693 ST18O60284 1047 aa9.37□□□□□ -0.91
MSL3-206ENST00000380693 MRE11P49959 708 aa9.37□□□□□ -0.91
MSL3-206ENST00000380693 IL17RAQ96F46 866 aa9.37□□□□□ -0.91
MSL3-206ENST00000380693 USP44Q9H0E7 712 aa9.37□□□□□ -0.91
MSL3-206ENST00000380693 PNMA6EA0A0J9YXQ4 647 aa9.36□□□□□ -0.91
MSL3-206ENST00000380693 EPB41L2O43491 1005 aaKnown RBP9.36□□□□□ -0.91
MSL3-206ENST00000380693 MX1P20591 662 aa9.36□□□□□ -0.91
MSL3-206ENST00000380693 NUCB2P80303 420 aa9.36□□□□□ -0.91
MSL3-206ENST00000380693 EXOC6BQ9Y2D4 811 aa9.36□□□□□ -0.91
MSL3-206ENST00000380693 CYP2E1P05181 493 aaPredicted RBP9.36□□□□□ -0.91
MSL3-206ENST00000380693 HDGFL1Q5TGJ6 251 aa9.36□□□□□ -0.91
MSL3-206ENST00000380693 SSH3Q8TE77 659 aa9.36□□□□□ -0.91
MSL3-206ENST00000380693 OVOS2A0A0G2JMS6 1433 aa9.36□□□□□ -0.91
MSL3-206ENST00000380693 GOLGA6L22H0YM25 854 aa9.35□□□□□ -0.91
MSL3-206ENST00000380693 UBTFL1P0CB47 393 aaPredicted RBP9.35□□□□□ -0.91
MSL3-206ENST00000380693 EIF4A1P60842 406 aaKnown RBP9.35□□□□□ -0.91
MSL3-206ENST00000380693 LTV1Q96GA3 475 aaPredicted RBP9.35□□□□□ -0.91
MSL3-206ENST00000380693 GZF1Q9H116 711 aaPredicted RBP9.35□□□□□ -0.91
MSL3-206ENST00000380693 LRRFIP2Q9Y608 721 aaKnown RBP9.35□□□□□ -0.91
MSL3-206ENST00000380693 KDM3BQ7LBC6 1761 aa9.35□□□□□ -0.91
MSL3-206ENST00000380693 ZBTB22O15209 634 aa9.35□□□□□ -0.91
MSL3-206ENST00000380693 RAB11FIP3O75154 756 aa9.35□□□□□ -0.91
MSL3-206ENST00000380693 SSFA2P28290 1259 aa9.35□□□□□ -0.91
MSL3-206ENST00000380693 ANAPC15P60006 121 aa9.35□□□□□ -0.91
MSL3-206ENST00000380693 POLA2Q14181 598 aa9.35□□□□□ -0.91
MSL3-206ENST00000380693 NBPF6Q5VWK0 638 aa9.35□□□□□ -0.91
MSL3-206ENST00000380693 NBPF4Q96M43 638 aa9.35□□□□□ -0.91
MSL3-206ENST00000380693 ESYT1Q9BSJ8 1104 aa9.35□□□□□ -0.91
MSL3-206ENST00000380693 LMTK3Q96Q04 1460 aa9.35□□□□□ -0.91
MSL3-206ENST00000380693 LMO7Q8WWI1 1683 aa9.35□□□□□ -0.91
MSL3-206ENST00000380693 MCM2P49736 904 aa9.34□□□□□ -0.91
MSL3-206ENST00000380693 AKAP4Q5JQC9 854 aa9.34□□□□□ -0.91
MSL3-206ENST00000380693 SLIT3O75094 1523 aa9.34□□□□□ -0.91
MSL3-206ENST00000380693 BAG4O95429 457 aaKnown RBP9.34□□□□□ -0.91
MSL3-206ENST00000380693 PSME1Q06323 249 aa9.34□□□□□ -0.91
MSL3-206ENST00000380693 AMOTQ4VCS5 1084 aa9.34□□□□□ -0.91
MSL3-206ENST00000380693 USHBP1Q8N6Y0 703 aa9.34□□□□□ -0.91
MSL3-206ENST00000380693 FOXD4L1Q9NU39 408 aa9.34□□□□□ -0.91
MSL3-206ENST00000380693 CHMLP26374 656 aa9.33□□□□□ -0.92
MSL3-206ENST00000380693 KLHL40Q2TBA0 621 aa9.33□□□□□ -0.92
MSL3-206ENST00000380693 C14orf37Q86TY3 774 aa9.33□□□□□ -0.92
MSL3-206ENST00000380693 NECTIN2Q92692 538 aa9.33□□□□□ -0.92
MSL3-206ENST00000380693 PHAXQ9H814 394 aaKnown RBP9.33□□□□□ -0.92
MSL3-206ENST00000380693 GRPEL1Q9HAV7 217 aa9.33□□□□□ -0.92
MSL3-206ENST00000380693 PLEKHO1Q53GL0 409 aaPredicted RBP9.32□□□□□ -0.92
MSL3-206ENST00000380693 MCCP23508 829 aa9.32□□□□□ -0.92
MSL3-206ENST00000380693 ESCO1Q5FWF5 840 aa9.32□□□□□ -0.92
MSL3-206ENST00000380693 BEND3Q5T5X7 828 aa9.32□□□□□ -0.92
MSL3-206ENST00000380693 ARHGEF25Q86VW2 580 aa9.32□□□□□ -0.92
MSL3-206ENST00000380693 DNAAF4Q8WXU2 420 aa9.32□□□□□ -0.92
MSL3-206ENST00000380693 LGR6Q9HBX8 967 aa9.32□□□□□ -0.92
MSL3-206ENST00000380693 HEG1Q9ULI3 1381 aa9.32□□□□□ -0.92
MSL3-206ENST00000380693 MST1RQ04912 1400 aa9.32□□□□□ -0.92
MSL3-206ENST00000380693 CAMTA1Q9Y6Y1 1673 aa9.32□□□□□ -0.92
MSL3-206ENST00000380693 GCP02774 474 aa9.31□□□□□ -0.92
MSL3-206ENST00000380693 TEFQ10587 303 aa9.31□□□□□ -0.92
MSL3-206ENST00000380693 MTX1Q13505 466 aa9.31□□□□□ -0.92
MSL3-206ENST00000380693 HSP90AB4PQ58FF6 505 aa9.31□□□□□ -0.92
MSL3-206ENST00000380693 ZNF530Q6P9A1 599 aaPredicted RBP9.31□□□□□ -0.92
MSL3-206ENST00000380693 PPP1R42Q7Z4L9 355 aa9.31□□□□□ -0.92
MSL3-206ENST00000380693 PANK2Q9BZ23 570 aa9.31□□□□□ -0.92
MSL3-206ENST00000380693 CHPF2Q9P2E5 772 aa9.31□□□□□ -0.92
MSL3-206ENST00000380693 USP42Q9H9J4 1324 aaKnown RBP9.3□□□□□ -0.92
MSL3-206ENST00000380693 CUL4AQ13619 759 aa9.3□□□□□ -0.92
MSL3-206ENST00000380693 TSHZ3Q63HK5 1081 aa9.3□□□□□ -0.92
MSL3-206ENST00000380693 RHPN1Q8TCX5 695 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms