RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 ATP8B2P98198 1209 aa19.99■□□□□ 0.79
VPS16-203ENST00000380469 MCTP1Q6DN14 999 aa19.99■□□□□ 0.79
VPS16-203ENST00000380469 CYP2E1P05181 493 aaPredicted RBP19.99■□□□□ 0.79
VPS16-203ENST00000380469 CLCN1P35523 988 aa19.99■□□□□ 0.79
VPS16-203ENST00000380469 AK9Q5TCS8 1911 aa19.98■□□□□ 0.79
VPS16-203ENST00000380469 TRIM44Q96DX7 344 aaPredicted RBP19.98■□□□□ 0.79
VPS16-203ENST00000380469 HOXC9P31274 260 aa19.98■□□□□ 0.79
VPS16-203ENST00000380469 NECTIN2Q92692 538 aa19.98■□□□□ 0.79
VPS16-203ENST00000380469 BABAM1Q9NWV8 329 aa19.98■□□□□ 0.79
VPS16-203ENST00000380469 SLIT1O75093 1534 aa19.98■□□□□ 0.79
VPS16-203ENST00000380469 RGPD8O14715 1765 aaPredicted RBP19.98■□□□□ 0.79
VPS16-203ENST00000380469 IBTKQ9P2D0 1353 aaPredicted RBP19.97■□□□□ 0.79
VPS16-203ENST00000380469 PIK3C2AO00443 1686 aa19.97■□□□□ 0.79
VPS16-203ENST00000380469 MX1P20591 662 aa19.97■□□□□ 0.79
VPS16-203ENST00000380469 TAF7Q15545 349 aaPredicted RBP19.97■□□□□ 0.79
VPS16-203ENST00000380469 MCCP23508 829 aa19.97■□□□□ 0.79
VPS16-203ENST00000380469 ARHGAP23Q9P227 1491 aa19.96■□□□□ 0.79
VPS16-203ENST00000380469 MAP3K5Q99683 1374 aa19.96■□□□□ 0.79
VPS16-203ENST00000380469 SALL3Q9BXA9 1300 aa19.96■□□□□ 0.79
VPS16-203ENST00000380469 THEMISQ8N1K5 641 aaPredicted RBP19.96■□□□□ 0.79
VPS16-203ENST00000380469 ESYT1Q9BSJ8 1104 aa19.96■□□□□ 0.79
VPS16-203ENST00000380469 SRCIN1Q9C0H9 1055 aa19.96■□□□□ 0.79
VPS16-203ENST00000380469 LRRC37A3O60309 1634 aa19.95■□□□□ 0.78
VPS16-203ENST00000380469 PNMA6EA0A0J9YXQ4 647 aa19.95■□□□□ 0.78
VPS16-203ENST00000380469 NUTM2GQ5VZR2 741 aa19.95■□□□□ 0.78
VPS16-203ENST00000380469 ZGPATQ8N5A5 531 aaKnown RBP19.95■□□□□ 0.78
VPS16-203ENST00000380469 TRIM6-TRIM34B2RNG4 842 aa19.94■□□□□ 0.78
VPS16-203ENST00000380469 NCLP19338 710 aaKnown RBP19.94■□□□□ 0.78
VPS16-203ENST00000380469 MCM2P49736 904 aa19.94■□□□□ 0.78
VPS16-203ENST00000380469 NEK4P51957 841 aa19.94■□□□□ 0.78
VPS16-203ENST00000380469 IL17REQ8NFR9 667 aa19.94■□□□□ 0.78
VPS16-203ENST00000380469 ANP32BQ92688 251 aaKnown RBP19.94■□□□□ 0.78
VPS16-203ENST00000380469 ANKARQ7Z5J8 1434 aa19.94■□□□□ 0.78
VPS16-203ENST00000380469 TSHZ3Q63HK5 1081 aa19.94■□□□□ 0.78
VPS16-203ENST00000380469 PLPPR3Q6T4P5 718 aa19.94■□□□□ 0.78
VPS16-203ENST00000380469 LMBRD1Q9NUN5 540 aa19.94■□□□□ 0.78
VPS16-203ENST00000380469 LRRFIP2Q9Y608 721 aaKnown RBP19.94■□□□□ 0.78
VPS16-203ENST00000380469 CACNA1FO60840 1977 aa19.94■□□□□ 0.78
VPS16-203ENST00000380469 PKP1Q13835 747 aa19.93■□□□□ 0.78
VPS16-203ENST00000380469 ABTB2Q8N961 1025 aa19.93■□□□□ 0.78
VPS16-203ENST00000380469 RILPL2Q969X0 211 aa19.93■□□□□ 0.78
VPS16-203ENST00000380469 LTV1Q96GA3 475 aaPredicted RBP19.93■□□□□ 0.78
VPS16-203ENST00000380469 FAM208AQ9UK61 1670 aaKnown RBP19.93■□□□□ 0.78
VPS16-203ENST00000380469 ESPNB1AK53 854 aa19.93■□□□□ 0.78
VPS16-203ENST00000380469 STAP2Q9UGK3 403 aa19.93■□□□□ 0.78
VPS16-203ENST00000380469 XRN1Q8IZH2 1706 aaKnown RBP19.93■□□□□ 0.78
VPS16-203ENST00000380469 UBTFL1P0CB47 393 aaPredicted RBP19.92■□□□□ 0.78
VPS16-203ENST00000380469 NASPP49321 788 aaPredicted RBP19.92■□□□□ 0.78
VPS16-203ENST00000380469 CCDC173Q0VFZ6 552 aa19.92■□□□□ 0.78
VPS16-203ENST00000380469 CHMLP26374 656 aa19.91■□□□□ 0.78
VPS16-203ENST00000380469 PXDNLA1KZ92 1463 aa19.91■□□□□ 0.78
VPS16-203ENST00000380469 ZNF445P59923 1031 aa19.91■□□□□ 0.78
VPS16-203ENST00000380469 ANAPC15P60006 121 aa19.91■□□□□ 0.78
VPS16-203ENST00000380469 USP44Q9H0E7 712 aa19.91■□□□□ 0.78
VPS16-203ENST00000380469 HDGFL1Q5TGJ6 251 aa19.9■□□□□ 0.78
VPS16-203ENST00000380469 CAVIN1Q6NZI2 390 aaKnown RBP19.9■□□□□ 0.78
VPS16-203ENST00000380469 TMX3Q96JJ7 454 aa19.9■□□□□ 0.78
VPS16-203ENST00000380469 ANO2Q9NQ90 1003 aa19.9■□□□□ 0.78
VPS16-203ENST00000380469 PRPF40AO75400 957 aaKnown RBP19.9■□□□□ 0.78
VPS16-203ENST00000380469 AOX1Q06278 1338 aa19.89■□□□□ 0.78
VPS16-203ENST00000380469 ZDHHC9Q9Y397 364 aa19.89■□□□□ 0.77
VPS16-203ENST00000380469 NWD1Q149M9 1564 aa19.89■□□□□ 0.77
VPS16-203ENST00000380469 ZSCAN23Q3MJ62 389 aa19.88■□□□□ 0.77
VPS16-203ENST00000380469 C14orf37Q86TY3 774 aa19.88■□□□□ 0.77
VPS16-203ENST00000380469 RAB11FIP3O75154 756 aa19.88■□□□□ 0.77
VPS16-203ENST00000380469 SSH3Q8TE77 659 aa19.87■□□□□ 0.77
VPS16-203ENST00000380469 PPP1R9BQ96SB3 815 aa19.87■□□□□ 0.77
VPS16-203ENST00000380469 TUBGCP6Q96RT7 1819 aa19.87■□□□□ 0.77
VPS16-203ENST00000380469 KCNA6P17658 529 aa19.87■□□□□ 0.77
VPS16-203ENST00000380469 NAP1L5Q96NT1 182 aaPredicted RBP19.87■□□□□ 0.77
VPS16-203ENST00000380469 CHMP4AQ9BY43 222 aa19.87■□□□□ 0.77
VPS16-203ENST00000380469 N4BP2Q86UW6 1770 aaPredicted RBP19.86■□□□□ 0.77
VPS16-203ENST00000380469 USHBP1Q8N6Y0 703 aa19.86■□□□□ 0.77
VPS16-203ENST00000380469 PHAXQ9H814 394 aaKnown RBP19.86■□□□□ 0.77
VPS16-203ENST00000380469 CUL4AQ13619 759 aa19.85■□□□□ 0.77
VPS16-203ENST00000380469 PALD1Q9ULE6 856 aa19.85■□□□□ 0.77
VPS16-203ENST00000380469 EPB41L2O43491 1005 aaKnown RBP19.85■□□□□ 0.77
VPS16-203ENST00000380469 SURF6O75683 361 aaKnown RBP19.85■□□□□ 0.77
VPS16-203ENST00000380469 INTS4Q96HW7 963 aaKnown RBP19.85■□□□□ 0.77
VPS16-203ENST00000380469 IL1RAPL2Q9NP60 686 aa19.85■□□□□ 0.77
VPS16-203ENST00000380469 MARF1Q9Y4F3 1742 aaKnown RBP19.84■□□□□ 0.77
VPS16-203ENST00000380469 USP54Q70EL1 1684 aa19.84■□□□□ 0.77
VPS16-203ENST00000380469 ERBB4Q15303 1308 aa19.84■□□□□ 0.77
VPS16-203ENST00000380469 PPP1R42Q7Z4L9 355 aa19.84■□□□□ 0.77
VPS16-203ENST00000380469 EIF2S2P20042 333 aaKnown RBP19.84■□□□□ 0.77
VPS16-203ENST00000380469 NUTM1Q86Y26 1132 aa19.83■□□□□ 0.76
VPS16-203ENST00000380469 UNC5CLQ8IV45 518 aa19.83■□□□□ 0.76
VPS16-203ENST00000380469 GPT2Q8TD30 523 aa19.83■□□□□ 0.76
VPS16-203ENST00000380469 IP6K1Q92551 441 aa19.83■□□□□ 0.76
VPS16-203ENST00000380469 IL17RAQ96F46 866 aa19.83■□□□□ 0.76
VPS16-203ENST00000380469 POLA2Q14181 598 aa19.82■□□□□ 0.76
VPS16-203ENST00000380469 HOXB7P09629 217 aa19.82■□□□□ 0.76
VPS16-203ENST00000380469 FOXD4L5Q5VV16 416 aaPredicted RBP19.82■□□□□ 0.76
VPS16-203ENST00000380469 FOXD4L4Q8WXT5 416 aaPredicted RBP19.82■□□□□ 0.76
VPS16-203ENST00000380469 PHF8Q9UPP1 1060 aa19.82■□□□□ 0.76
VPS16-203ENST00000380469 CEMIPQ8WUJ3 1361 aa19.82■□□□□ 0.76
VPS16-203ENST00000380469 BRD1O95696 1058 aa19.81■□□□□ 0.76
VPS16-203ENST00000380469 EIF4A1P60842 406 aaKnown RBP19.81■□□□□ 0.76
VPS16-203ENST00000380469 KIF1BPQ96EK5 621 aa19.81■□□□□ 0.76
VPS16-203ENST00000380469 SRGAP3O43295 1099 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms