RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 RTL1A6NKG5 1358 aa9.96□□□□□ -0.81
PDLIM5-204ENST00000380176 MAP3K5Q99683 1374 aa9.96□□□□□ -0.81
PDLIM5-204ENST00000380176 BECN1Q14457 450 aa9.96□□□□□ -0.82
PDLIM5-204ENST00000380176 BMP2KLQ5H9B9 411 aa9.96□□□□□ -0.82
PDLIM5-204ENST00000380176 SLC4A10Q6U841 1118 aa9.96□□□□□ -0.82
PDLIM5-204ENST00000380176 DCTPP1Q9H773 170 aa9.96□□□□□ -0.82
PDLIM5-204ENST00000380176 FRAT2O75474 233 aaPredicted RBP9.96□□□□□ -0.82
PDLIM5-204ENST00000380176 CEP85Q6P2H3 762 aa9.96□□□□□ -0.82
PDLIM5-204ENST00000380176 C16orf71Q8IYS4 520 aaPredicted RBP9.96□□□□□ -0.82
PDLIM5-204ENST00000380176 ANKRD44Q8N8A2 993 aa9.96□□□□□ -0.82
PDLIM5-204ENST00000380176 FAM208AQ9UK61 1670 aaKnown RBP9.95□□□□□ -0.82
PDLIM5-204ENST00000380176 LRRC59Q96AG4 307 aaKnown RBP9.95□□□□□ -0.82
PDLIM5-204ENST00000380176 PROM2Q8N271 834 aa9.95□□□□□ -0.82
PDLIM5-204ENST00000380176 ANO8Q9HCE9 1232 aaPredicted RBP9.94□□□□□ -0.82
PDLIM5-204ENST00000380176 TAF7Q15545 349 aaPredicted RBP9.94□□□□□ -0.82
PDLIM5-204ENST00000380176 PLEKHM2Q8IWE5 1019 aa9.94□□□□□ -0.82
PDLIM5-204ENST00000380176 OTUD7AQ8TE49 926 aaPredicted RBP9.94□□□□□ -0.82
PDLIM5-204ENST00000380176 ANTXR1Q9H6X2 564 aa9.94□□□□□ -0.82
PDLIM5-204ENST00000380176 APBB1O00213 710 aa9.93□□□□□ -0.82
PDLIM5-204ENST00000380176 SMARCA5O60264 1052 aaPredicted RBP9.93□□□□□ -0.82
PDLIM5-204ENST00000380176 GSPT1P15170 499 aaKnown RBP9.93□□□□□ -0.82
PDLIM5-204ENST00000380176 RPAP2Q8IXW5 612 aaPredicted RBP9.93□□□□□ -0.82
PDLIM5-204ENST00000380176 LGR6Q9HBX8 967 aa9.93□□□□□ -0.82
PDLIM5-204ENST00000380176 CACNA1FO60840 1977 aa9.93□□□□□ -0.82
PDLIM5-204ENST00000380176 TBC1D9Q6ZT07 1266 aa9.93□□□□□ -0.82
PDLIM5-204ENST00000380176 GCP02774 474 aa9.93□□□□□ -0.82
PDLIM5-204ENST00000380176 FLIIQ13045 1269 aa9.93□□□□□ -0.82
PDLIM5-204ENST00000380176 LMOD2Q6P5Q4 547 aa9.93□□□□□ -0.82
PDLIM5-204ENST00000380176 SAMD1Q6SPF0 538 aaPredicted RBP9.93□□□□□ -0.82
PDLIM5-204ENST00000380176 STK31Q9BXU1 1019 aa9.93□□□□□ -0.82
PDLIM5-204ENST00000380176 PDIA4P13667 645 aaKnown RBP9.92□□□□□ -0.82
PDLIM5-204ENST00000380176 CCDC30Q5VVM6 783 aa9.92□□□□□ -0.82
PDLIM5-204ENST00000380176 KCNH5Q8NCM2 988 aa9.92□□□□□ -0.82
PDLIM5-204ENST00000380176 PHRF1Q9P1Y6 1649 aaKnown RBP9.92□□□□□ -0.82
PDLIM5-204ENST00000380176 RGPD5Q99666 1765 aa9.91□□□□□ -0.82
PDLIM5-204ENST00000380176 ABCB7O75027 752 aa9.91□□□□□ -0.82
PDLIM5-204ENST00000380176 RBM25P49756 843 aaKnown RBP9.91□□□□□ -0.82
PDLIM5-204ENST00000380176 FKBP5Q13451 457 aaPredicted RBP9.91□□□□□ -0.82
PDLIM5-204ENST00000380176 CEMIPQ8WUJ3 1361 aa9.91□□□□□ -0.82
PDLIM5-204ENST00000380176 TRPM3Q9HCF6 1732 aaPredicted RBP9.91□□□□□ -0.82
PDLIM5-204ENST00000380176 CCT4P50991 539 aaKnown RBP9.91□□□□□ -0.82
PDLIM5-204ENST00000380176 ARHGEF25Q86VW2 580 aa9.91□□□□□ -0.82
PDLIM5-204ENST00000380176 PROSER2Q86WR7 435 aaPredicted RBP9.91□□□□□ -0.82
PDLIM5-204ENST00000380176 KCNQ3O43525 872 aa9.91□□□□□ -0.82
PDLIM5-204ENST00000380176 PHAXQ9H814 394 aaKnown RBP9.91□□□□□ -0.82
PDLIM5-204ENST00000380176 AXIN2Q9Y2T1 843 aa9.91□□□□□ -0.82
PDLIM5-204ENST00000380176 KIF2CQ99661 725 aa9.9□□□□□ -0.82
PDLIM5-204ENST00000380176 TTC22Q5TAA0 569 aa9.9□□□□□ -0.83
PDLIM5-204ENST00000380176 MPRIPQ6WCQ1 1025 aa9.9□□□□□ -0.83
PDLIM5-204ENST00000380176 SLIT3O75094 1523 aa9.9□□□□□ -0.83
PDLIM5-204ENST00000380176 MED1Q15648 1581 aaPredicted RBP9.9□□□□□ -0.83
PDLIM5-204ENST00000380176 LMO7Q8WWI1 1683 aa9.89□□□□□ -0.83
PDLIM5-204ENST00000380176 KDM3BQ7LBC6 1761 aa9.89□□□□□ -0.83
PDLIM5-204ENST00000380176 KRT28Q7Z3Y7 464 aa9.89□□□□□ -0.83
PDLIM5-204ENST00000380176 EIF2S2P20042 333 aaKnown RBP9.89□□□□□ -0.83
PDLIM5-204ENST00000380176 HDGFL1Q5TGJ6 251 aa9.89□□□□□ -0.83
PDLIM5-204ENST00000380176 DDX17Q92841 729 aaKnown RBP9.89□□□□□ -0.83
PDLIM5-204ENST00000380176 BABAM1Q9NWV8 329 aa9.89□□□□□ -0.83
PDLIM5-204ENST00000380176 PXDNQ92626 1479 aa9.89□□□□□ -0.83
PDLIM5-204ENST00000380176 EIF4A1P60842 406 aaKnown RBP9.88□□□□□ -0.83
PDLIM5-204ENST00000380176 POLA2Q14181 598 aa9.88□□□□□ -0.83
PDLIM5-204ENST00000380176 ZNF530Q6P9A1 599 aaPredicted RBP9.88□□□□□ -0.83
PDLIM5-204ENST00000380176 N4BP2Q86UW6 1770 aaPredicted RBP9.88□□□□□ -0.83
PDLIM5-204ENST00000380176 C1orf167Q5SNV9 1468 aa9.88□□□□□ -0.83
PDLIM5-204ENST00000380176 PNMA6EA0A0J9YXQ4 647 aa9.88□□□□□ -0.83
PDLIM5-204ENST00000380176 CDC45O75419 566 aa9.88□□□□□ -0.83
PDLIM5-204ENST00000380176 GNAI2P04899 355 aa9.88□□□□□ -0.83
PDLIM5-204ENST00000380176 ANKRD24Q8TF21 1146 aa9.88□□□□□ -0.83
PDLIM5-204ENST00000380176 EXOC6BQ9Y2D4 811 aa9.88□□□□□ -0.83
PDLIM5-204ENST00000380176 STRCP1A6NGW2 1772 aa9.88□□□□□ -0.83
PDLIM5-204ENST00000380176 RBM42Q9BTD8 480 aaKnown RBP9.88□□□□□ -0.83
PDLIM5-204ENST00000380176 CD2BP2O95400 341 aaKnown RBP9.87□□□□□ -0.83
PDLIM5-204ENST00000380176 GSE1Q14687 1217 aa9.87□□□□□ -0.83
PDLIM5-204ENST00000380176 AKAP4Q5JQC9 854 aa9.87□□□□□ -0.83
PDLIM5-204ENST00000380176 HMMRO75330 724 aa9.87□□□□□ -0.83
PDLIM5-204ENST00000380176 ANXA1P04083 346 aa9.87□□□□□ -0.83
PDLIM5-204ENST00000380176 SDSP20132 328 aa9.87□□□□□ -0.83
PDLIM5-204ENST00000380176 ZC3H6P61129 1189 aaKnown RBP9.87□□□□□ -0.83
PDLIM5-204ENST00000380176 USP44Q9H0E7 712 aa9.87□□□□□ -0.83
PDLIM5-204ENST00000380176 C19orf44Q9H6X5 657 aa9.87□□□□□ -0.83
PDLIM5-204ENST00000380176 PLEKHO1Q53GL0 409 aaPredicted RBP9.86□□□□□ -0.83
PDLIM5-204ENST00000380176 CHPF2Q9P2E5 772 aa9.86□□□□□ -0.83
PDLIM5-204ENST00000380176 LRRFIP2Q9Y608 721 aaKnown RBP9.86□□□□□ -0.83
PDLIM5-204ENST00000380176 SOS1Q07889 1333 aaPredicted RBP9.86□□□□□ -0.83
PDLIM5-204ENST00000380176 NCAPD2Q15021 1401 aa9.86□□□□□ -0.83
PDLIM5-204ENST00000380176 BTBD11A6QL63 1104 aa9.86□□□□□ -0.83
PDLIM5-204ENST00000380176 TEFQ10587 303 aa9.86□□□□□ -0.83
PDLIM5-204ENST00000380176 HSCBQ8IWL3 235 aa9.86□□□□□ -0.83
PDLIM5-204ENST00000380176 ALS2Q96Q42 1657 aa9.86□□□□□ -0.83
PDLIM5-204ENST00000380176 RNMTO43148 476 aaKnown RBP9.86□□□□□ -0.83
PDLIM5-204ENST00000380176 TSHZ3Q63HK5 1081 aa9.86□□□□□ -0.83
PDLIM5-204ENST00000380176 KIF1AQ12756 1690 aa9.85□□□□□ -0.83
PDLIM5-204ENST00000380176 GNAI3P08754 354 aa9.85□□□□□ -0.83
PDLIM5-204ENST00000380176 ATP8B2P98198 1209 aa9.85□□□□□ -0.83
PDLIM5-204ENST00000380176 SNX21Q969T3 373 aa9.85□□□□□ -0.83
PDLIM5-204ENST00000380176 CAMTA1Q9Y6Y1 1673 aa9.85□□□□□ -0.83
PDLIM5-204ENST00000380176 PRAMEF22A3QJZ6 481 aa9.84□□□□□ -0.83
PDLIM5-204ENST00000380176 PDE1AP54750 535 aa9.84□□□□□ -0.83
PDLIM5-204ENST00000380176 AMOTQ4VCS5 1084 aa9.84□□□□□ -0.83
PDLIM5-204ENST00000380176 PXDNLA1KZ92 1463 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms