RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 PTPRCP08575 1304 aa22.04■■□□□ 1.12
THUMPD2-201ENST00000378727 ZBTB7BO15156 539 aaPredicted RBP22.04■■□□□ 1.12
THUMPD2-201ENST00000378727 G2E3Q7L622 706 aa22.03■■□□□ 1.12
THUMPD2-201ENST00000378727 PARP4Q9UKK3 1724 aaKnown RBP22.03■■□□□ 1.12
THUMPD2-201ENST00000378727 CACNA1FO60840 1977 aa22.03■■□□□ 1.12
THUMPD2-201ENST00000378727 CYP27B1O15528 508 aa22.02■■□□□ 1.12
THUMPD2-201ENST00000378727 CCDC30Q5VVM6 783 aa22.02■■□□□ 1.12
THUMPD2-201ENST00000378727 IFNL2Q8IZJ0 200 aa22.02■■□□□ 1.11
THUMPD2-201ENST00000378727 LARP1Q6PKG0 1096 aaKnown RBP22.01■■□□□ 1.11
THUMPD2-201ENST00000378727 CARD10Q9BWT7 1032 aa22.01■■□□□ 1.11
THUMPD2-201ENST00000378727 STK31Q9BXU1 1019 aa22.01■■□□□ 1.11
THUMPD2-201ENST00000378727 RWDD1Q9H446 243 aaPredicted RBP22.01■■□□□ 1.11
THUMPD2-201ENST00000378727 STRN4Q9NRL3 753 aa22.01■■□□□ 1.11
THUMPD2-201ENST00000378727 PHLPP1O60346 1717 aa22■■□□□ 1.11
THUMPD2-201ENST00000378727 INTS3Q68E01 1043 aaKnown RBP22■■□□□ 1.11
THUMPD2-201ENST00000378727 NECTIN2Q92692 538 aa22■■□□□ 1.11
THUMPD2-201ENST00000378727 COL16A1Q07092 1604 aaPredicted RBP22■■□□□ 1.11
THUMPD2-201ENST00000378727 HOXB7P09629 217 aa21.99■■□□□ 1.11
THUMPD2-201ENST00000378727 COL14A1Q05707 1796 aaKnown RBP21.98■■□□□ 1.11
THUMPD2-201ENST00000378727 EVA1CP58658 441 aa21.98■■□□□ 1.11
THUMPD2-201ENST00000378727 HDAC1Q13547 482 aaPredicted RBP21.98■■□□□ 1.11
THUMPD2-201ENST00000378727 HDGFL1Q5TGJ6 251 aa21.98■■□□□ 1.11
THUMPD2-201ENST00000378727 HEG1Q9ULI3 1381 aa21.98■■□□□ 1.11
THUMPD2-201ENST00000378727 MRC1P22897 1456 aa21.97■■□□□ 1.11
THUMPD2-201ENST00000378727 SLC52A2Q9HAB3 445 aa21.97■■□□□ 1.11
THUMPD2-201ENST00000378727 DCAF5Q96JK2 942 aa21.97■■□□□ 1.11
THUMPD2-201ENST00000378727 CHMP4BQ9H444 224 aaKnown RBP21.97■■□□□ 1.11
THUMPD2-201ENST00000378727 BTG4Q9NY30 223 aa21.96■■□□□ 1.11
THUMPD2-201ENST00000378727 FLIIQ13045 1269 aa21.95■■□□□ 1.11
THUMPD2-201ENST00000378727 SHANK3Q9BYB0 1731 aa21.95■■□□□ 1.11
THUMPD2-201ENST00000378727 IL2RBP14784 551 aa21.95■■□□□ 1.1
THUMPD2-201ENST00000378727 F6X3S4 739 aa21.94■■□□□ 1.1
THUMPD2-201ENST00000378727 NFATC2IPQ8NCF5 419 aa21.94■■□□□ 1.1
THUMPD2-201ENST00000378727 ZCRB1Q8TBF4 217 aaKnown RBP21.94■■□□□ 1.1
THUMPD2-201ENST00000378727 TOM1O60784 492 aa21.94■■□□□ 1.1
THUMPD2-201ENST00000378727 EIF2S2P20042 333 aaKnown RBP21.94■■□□□ 1.1
THUMPD2-201ENST00000378727 RGS3P49796 1198 aa21.94■■□□□ 1.1
THUMPD2-201ENST00000378727 C1orf115Q9H7X2 142 aa21.94■■□□□ 1.1
THUMPD2-201ENST00000378727 PCDH11XQ9BZA7 1347 aa21.93■■□□□ 1.1
THUMPD2-201ENST00000378727 PCDH11YQ9BZA8 1340 aa21.93■■□□□ 1.1
THUMPD2-201ENST00000378727 GIGYF1O75420 1035 aaPredicted RBP21.93■■□□□ 1.1
THUMPD2-201ENST00000378727 HSP90AB1P08238 724 aaKnown RBP21.93■■□□□ 1.1
THUMPD2-201ENST00000378727 PIP4K2BP78356 416 aa21.92■■□□□ 1.1
THUMPD2-201ENST00000378727 SLC39A6Q13433 755 aa21.92■■□□□ 1.1
THUMPD2-201ENST00000378727 ZNF790Q6PG37 636 aa21.92■■□□□ 1.1
THUMPD2-201ENST00000378727 FKBP5Q13451 457 aaPredicted RBP21.91■■□□□ 1.1
THUMPD2-201ENST00000378727 PDZRN3Q9UPQ7 1066 aa21.91■■□□□ 1.1
THUMPD2-201ENST00000378727 PHAXQ9H814 394 aaKnown RBP21.91■■□□□ 1.1
THUMPD2-201ENST00000378727 CHPF2Q9P2E5 772 aa21.91■■□□□ 1.1
THUMPD2-201ENST00000378727 PRAMEF22A3QJZ6 481 aa21.9■■□□□ 1.1
THUMPD2-201ENST00000378727 N4BP2Q86UW6 1770 aaPredicted RBP21.9■■□□□ 1.1
THUMPD2-201ENST00000378727 SLC4A10Q6U841 1118 aa21.89■■□□□ 1.1
THUMPD2-201ENST00000378727 SIRT2Q8IXJ6 389 aa21.89■■□□□ 1.1
THUMPD2-201ENST00000378727 SMC5Q8IY18 1101 aa21.89■■□□□ 1.1
THUMPD2-201ENST00000378727 USP35Q9P2H5 1018 aa21.89■■□□□ 1.1
THUMPD2-201ENST00000378727 PDE4AP27815 886 aa21.89■■□□□ 1.09
THUMPD2-201ENST00000378727 CHMP4AQ9BY43 222 aa21.89■■□□□ 1.09
THUMPD2-201ENST00000378727 C5P01031 1676 aa21.88■■□□□ 1.09
THUMPD2-201ENST00000378727 CCT4P50991 539 aaKnown RBP21.88■■□□□ 1.09
THUMPD2-201ENST00000378727 PLCH1Q4KWH8 1693 aa21.88■■□□□ 1.09
THUMPD2-201ENST00000378727 NKX1-1Q15270 411 aaPredicted RBP21.87■■□□□ 1.09
THUMPD2-201ENST00000378727 MEIS3Q99687 375 aa21.87■■□□□ 1.09
THUMPD2-201ENST00000378727 BACH2Q9BYV9 841 aa21.87■■□□□ 1.09
THUMPD2-201ENST00000378727 CABP4P57796 275 aa21.86■■□□□ 1.09
THUMPD2-201ENST00000378727 PXDNLA1KZ92 1463 aa21.86■■□□□ 1.09
THUMPD2-201ENST00000378727 ANXA1P04083 346 aa21.86■■□□□ 1.09
THUMPD2-201ENST00000378727 ATP10DQ9P241 1426 aa21.85■■□□□ 1.09
THUMPD2-201ENST00000378727 UBAP1LF5GYI3 381 aa21.85■■□□□ 1.09
THUMPD2-201ENST00000378727 DDX54Q8TDD1 881 aaKnown RBP21.85■■□□□ 1.09
THUMPD2-201ENST00000378727 ZNF496Q96IT1 587 aaPredicted RBP21.85■■□□□ 1.09
THUMPD2-201ENST00000378727 DBF4Q9UBU7 674 aaPredicted RBP21.85■■□□□ 1.09
THUMPD2-201ENST00000378727 DISP2A7MBM2 1401 aa21.85■■□□□ 1.09
THUMPD2-201ENST00000378727 ADAMTS2O95450 1211 aa21.84■■□□□ 1.09
THUMPD2-201ENST00000378727 PROSER3Q2NL68 480 aa21.84■■□□□ 1.09
THUMPD2-201ENST00000378727 GLI3P10071 1580 aa21.83■■□□□ 1.09
THUMPD2-201ENST00000378727 NRAPQ86VF7 1730 aa21.83■■□□□ 1.09
THUMPD2-201ENST00000378727 ERVV-2B6SEH9 535 aa21.83■■□□□ 1.08
THUMPD2-201ENST00000378727 TOGARAM1Q9Y4F4 1720 aa21.82■■□□□ 1.08
THUMPD2-201ENST00000378727 TTC5Q8N0Z6 440 aa21.81■■□□□ 1.08
THUMPD2-201ENST00000378727 WNK3Q9BYP7 1800 aa21.81■■□□□ 1.08
THUMPD2-201ENST00000378727 PAPPAQ13219 1627 aa21.8■■□□□ 1.08
THUMPD2-201ENST00000378727 NUCB1Q02818 461 aa21.8■■□□□ 1.08
THUMPD2-201ENST00000378727 PDIA6Q15084 440 aa21.8■■□□□ 1.08
THUMPD2-201ENST00000378727 CEP85Q6P2H3 762 aa21.8■■□□□ 1.08
THUMPD2-201ENST00000378727 ANKRD44Q8N8A2 993 aa21.8■■□□□ 1.08
THUMPD2-201ENST00000378727 ADCY9O60503 1353 aa21.8■■□□□ 1.08
THUMPD2-201ENST00000378727 UBR2Q8IWV8 1755 aa21.8■■□□□ 1.08
THUMPD2-201ENST00000378727 NUTM2BA6NNL0 878 aaPredicted RBP21.79■■□□□ 1.08
THUMPD2-201ENST00000378727 NUTM2EB1AL46 878 aaPredicted RBP21.79■■□□□ 1.08
THUMPD2-201ENST00000378727 NUTM2AQ8IVF1 878 aaPredicted RBP21.79■■□□□ 1.08
THUMPD2-201ENST00000378727 FMNL2Q96PY5 1086 aa21.79■■□□□ 1.08
THUMPD2-201ENST00000378727 PI4KAP2A4QPH2 592 aa21.79■■□□□ 1.08
THUMPD2-201ENST00000378727 C8orf34Q49A92 452 aa21.79■■□□□ 1.08
THUMPD2-201ENST00000378727 PI4KAP1Q8N8J0 262 aa21.79■■□□□ 1.08
THUMPD2-201ENST00000378727 GCC1Q96CN9 775 aa21.79■■□□□ 1.08
THUMPD2-201ENST00000378727 DDX21Q9NR30 783 aaKnown RBP eCLIP21.79■■□□□ 1.08
THUMPD2-201ENST00000378727 SNRPA1P09661 255 aaKnown RBP21.78■■□□□ 1.08
THUMPD2-201ENST00000378727 FAM161AQ3B820 660 aa21.78■■□□□ 1.08
THUMPD2-201ENST00000378727 RPAP2Q8IXW5 612 aaPredicted RBP21.78■■□□□ 1.08
THUMPD2-201ENST00000378727 HYPKQ9NX55 129 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms