RNA–Protein interactions for RNA: ENST00000378540.8

PPM1B-203, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

TSL 2

Gene PPM1B, Length 1,703 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-203ENST00000378540 ERICH6BQ5W0A0 696 aa29.82■■■□□ 2.36
PPM1B-203ENST00000378540 SLC52A2Q9HAB3 445 aa29.82■■■□□ 2.36
PPM1B-203ENST00000378540 BCL9LQ86UU0 1499 aa29.81■■■□□ 2.36
PPM1B-203ENST00000378540 USP21Q9UK80 565 aa29.81■■■□□ 2.36
PPM1B-203ENST00000378540 KCNQ3O43525 872 aa29.8■■■□□ 2.36
PPM1B-203ENST00000378540 NFATC2IPQ8NCF5 419 aa29.8■■■□□ 2.36
PPM1B-203ENST00000378540 SHANK3Q9BYB0 1731 aa29.8■■■□□ 2.36
PPM1B-203ENST00000378540 EXOC5O00471 708 aa29.79■■■□□ 2.36
PPM1B-203ENST00000378540 CDCA7Q9BWT1 371 aaPredicted RBP29.79■■■□□ 2.36
PPM1B-203ENST00000378540 CABP4P57796 275 aa29.78■■■□□ 2.36
PPM1B-203ENST00000378540 VPS72Q15906 364 aa29.78■■■□□ 2.36
PPM1B-203ENST00000378540 NKX1-1Q15270 411 aaPredicted RBP29.77■■■□□ 2.36
PPM1B-203ENST00000378540 EXOC6Q8TAG9 804 aa29.77■■■□□ 2.36
PPM1B-203ENST00000378540 WNK3Q9BYP7 1800 aa29.77■■■□□ 2.36
PPM1B-203ENST00000378540 EIF4A1P60842 406 aaKnown RBP29.76■■■□□ 2.36
PPM1B-203ENST00000378540 CRBNQ96SW2 442 aa29.76■■■□□ 2.36
PPM1B-203ENST00000378540 SIPA1L3O60292 1781 aaPredicted RBP29.76■■■□□ 2.36
PPM1B-203ENST00000378540 KDM3BQ7LBC6 1761 aa29.76■■■□□ 2.35
PPM1B-203ENST00000378540 MRPL50Q8N5N7 158 aaKnown RBP29.76■■■□□ 2.35
PPM1B-203ENST00000378540 NOB1Q9ULX3 412 aaKnown RBP29.76■■■□□ 2.35
PPM1B-203ENST00000378540 ZKSCAN2Q63HK3 967 aa29.74■■■□□ 2.35
PPM1B-203ENST00000378540 BARGINQ6ZT62 677 aa29.74■■■□□ 2.35
PPM1B-203ENST00000378540 SLC39A6Q13433 755 aa29.73■■■□□ 2.35
PPM1B-203ENST00000378540 TNNQ9UQP3 1299 aa29.73■■■□□ 2.35
PPM1B-203ENST00000378540 AFF2P51816 1311 aa29.72■■■□□ 2.35
PPM1B-203ENST00000378540 KIF16BQ96L93 1317 aa29.72■■■□□ 2.35
PPM1B-203ENST00000378540 ERVV-2B6SEH9 535 aa29.72■■■□□ 2.35
PPM1B-203ENST00000378540 DDB1Q16531 1140 aa29.72■■■□□ 2.35
PPM1B-203ENST00000378540 PDE3AQ14432 1141 aa29.71■■■□□ 2.35
PPM1B-203ENST00000378540 FAM98CQ17RN3 349 aaKnown RBP29.71■■■□□ 2.35
PPM1B-203ENST00000378540 PANK1Q8TE04 598 aa29.71■■■□□ 2.35
PPM1B-203ENST00000378540 PPP4R2Q9NY27 417 aa29.71■■■□□ 2.35
PPM1B-203ENST00000378540 MRC1P22897 1456 aa29.71■■■□□ 2.35
PPM1B-203ENST00000378540 CLUAP1Q96AJ1 413 aa29.71■■■□□ 2.35
PPM1B-203ENST00000378540 IPO8O15397 1037 aaKnown RBP29.7■■■□□ 2.34
PPM1B-203ENST00000378540 BRPF1P55201 1214 aaPredicted RBP29.7■■■□□ 2.34
PPM1B-203ENST00000378540 NECTIN2Q92692 538 aa29.7■■■□□ 2.34
PPM1B-203ENST00000378540 TNS2Q63HR2 1409 aa29.69■■■□□ 2.34
PPM1B-203ENST00000378540 ZNF790Q6PG37 636 aa29.69■■■□□ 2.34
PPM1B-203ENST00000378540 SOS1Q07889 1333 aaPredicted RBP29.68■■■□□ 2.34
PPM1B-203ENST00000378540 ATF7IPQ6VMQ6 1270 aa29.67■■■□□ 2.34
PPM1B-203ENST00000378540 TTC5Q8N0Z6 440 aa29.67■■■□□ 2.34
PPM1B-203ENST00000378540 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.66■■■□□ 2.34
PPM1B-203ENST00000378540 TRIM27P14373 513 aa29.66■■■□□ 2.34
PPM1B-203ENST00000378540 CCDC30Q5VVM6 783 aa29.66■■■□□ 2.34
PPM1B-203ENST00000378540 FTSJ3Q8IY81 847 aaKnown RBP29.66■■■□□ 2.34
PPM1B-203ENST00000378540 SLC4A2P04920 1241 aa29.65■■■□□ 2.34
PPM1B-203ENST00000378540 RLBP1P12271 317 aa29.65■■■□□ 2.34
PPM1B-203ENST00000378540 EIF2S2P20042 333 aaKnown RBP29.65■■■□□ 2.34
PPM1B-203ENST00000378540 DZIP1LQ8IYY4 767 aaKnown RBP29.65■■■□□ 2.34
PPM1B-203ENST00000378540 MS4A1P11836 297 aa29.65■■■□□ 2.34
PPM1B-203ENST00000378540 STK31Q9BXU1 1019 aa29.65■■■□□ 2.34
PPM1B-203ENST00000378540 COG6Q9Y2V7 657 aa29.65■■■□□ 2.34
PPM1B-203ENST00000378540 A0A0G2JS52 829 aa29.64■■■□□ 2.34
PPM1B-203ENST00000378540 MYT1Q01538 1121 aa29.64■■■□□ 2.34
PPM1B-203ENST00000378540 HDGFL1Q5TGJ6 251 aa29.64■■■□□ 2.34
PPM1B-203ENST00000378540 TMOD3Q9NYL9 352 aa29.63■■■□□ 2.33
PPM1B-203ENST00000378540 GIGYF1O75420 1035 aaPredicted RBP29.62■■■□□ 2.33
PPM1B-203ENST00000378540 HOXB7P09629 217 aa29.62■■■□□ 2.33
PPM1B-203ENST00000378540 TOGARAM1Q9Y4F4 1720 aa29.62■■■□□ 2.33
PPM1B-203ENST00000378540 MARCH10Q8NA82 808 aaPredicted RBP29.61■■■□□ 2.33
PPM1B-203ENST00000378540 ARHGAP45Q92619 1136 aa29.61■■■□□ 2.33
PPM1B-203ENST00000378540 B4GALNT3Q6L9W6 998 aa29.6■■■□□ 2.33
PPM1B-203ENST00000378540 ZNF496Q96IT1 587 aaPredicted RBP29.6■■■□□ 2.33
PPM1B-203ENST00000378540 GJD4Q96KN9 370 aaPredicted RBP29.6■■■□□ 2.33
PPM1B-203ENST00000378540 HEG1Q9ULI3 1381 aa29.6■■■□□ 2.33
PPM1B-203ENST00000378540 PRAMEF22A3QJZ6 481 aa29.59■■■□□ 2.33
PPM1B-203ENST00000378540 TRPC5Q9UL62 973 aaPredicted RBP29.59■■■□□ 2.33
PPM1B-203ENST00000378540 FMNL2Q96PY5 1086 aa29.59■■■□□ 2.33
PPM1B-203ENST00000378540 CHMP4AQ9BY43 222 aa29.58■■■□□ 2.33
PPM1B-203ENST00000378540 PIGBQ92521 554 aa29.57■■■□□ 2.32
PPM1B-203ENST00000378540 SYTL4Q96C24 671 aaPredicted RBP29.57■■■□□ 2.32
PPM1B-203ENST00000378540 API5Q9BZZ5 524 aaKnown RBP29.57■■■□□ 2.32
PPM1B-203ENST00000378540 ATRNO75882 1429 aa29.57■■■□□ 2.32
PPM1B-203ENST00000378540 G2E3Q7L622 706 aa29.57■■■□□ 2.32
PPM1B-203ENST00000378540 QTRT2Q9H974 415 aaKnown RBP29.57■■■□□ 2.32
PPM1B-203ENST00000378540 CCDC136Q96JN2 1154 aa29.56■■■□□ 2.32
PPM1B-203ENST00000378540 TMEM57Q8N5G2 664 aa29.55■■■□□ 2.32
PPM1B-203ENST00000378540 KAT6BQ8WYB5 2073 aa29.55■■■□□ 2.32
PPM1B-203ENST00000378540 PRIM1P49642 420 aaKnown RBP29.54■■■□□ 2.32
PPM1B-203ENST00000378540 MVPQ14764 893 aaKnown RBP29.54■■■□□ 2.32
PPM1B-203ENST00000378540 GLI3P10071 1580 aa29.54■■■□□ 2.32
PPM1B-203ENST00000378540 SNRPA1P09661 255 aaKnown RBP29.54■■■□□ 2.32
PPM1B-203ENST00000378540 ITPRIPQ8IWB1 547 aa29.54■■■□□ 2.32
PPM1B-203ENST00000378540 CHPF2Q9P2E5 772 aa29.54■■■□□ 2.32
PPM1B-203ENST00000378540 ITGB4P16144 1822 aa29.53■■■□□ 2.32
PPM1B-203ENST00000378540 PTPRCP08575 1304 aa29.53■■■□□ 2.32
PPM1B-203ENST00000378540 ACSBG1Q96GR2 724 aa29.53■■■□□ 2.32
PPM1B-203ENST00000378540 PTCD1O75127 700 aaKnown RBP29.52■■■□□ 2.32
PPM1B-203ENST00000378540 FBXO41Q8TF61 875 aa29.52■■■□□ 2.32
PPM1B-203ENST00000378540 ASAP1Q9ULH1 1129 aa29.51■■■□□ 2.32
PPM1B-203ENST00000378540 FLIIQ13045 1269 aa29.5■■■□□ 2.31
PPM1B-203ENST00000378540 DOT1LQ8TEK3 1739 aa29.5■■■□□ 2.31
PPM1B-203ENST00000378540 PAPPAQ13219 1627 aa29.5■■■□□ 2.31
PPM1B-203ENST00000378540 C5P01031 1676 aa29.49■■■□□ 2.31
PPM1B-203ENST00000378540 ANXA1P04083 346 aa29.49■■■□□ 2.31
PPM1B-203ENST00000378540 BCL9O00512 1426 aa29.49■■■□□ 2.31
PPM1B-203ENST00000378540 ABCC4O15439 1325 aa29.49■■■□□ 2.31
PPM1B-203ENST00000378540 PHAXQ9H814 394 aaKnown RBP29.48■■■□□ 2.31
PPM1B-203ENST00000378540 ATG3Q9NT62 314 aa29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms