RNA–Protein interactions for RNA: ENST00000378204.6

EXT1-201, Transcript of exostosin glycosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXT1, Length 8,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-201ENST00000378204 CCDC91Q7Z6B0 441 aa17.41■□□□□ 0.38
EXT1-201ENST00000378204 PLCD3Q8N3E9 789 aa17.41■□□□□ 0.38
EXT1-201ENST00000378204 ZNF287Q9HBT7 754 aa17.41■□□□□ 0.38
EXT1-201ENST00000378204 TIAM1Q13009 1591 aa17.4■□□□□ 0.38
EXT1-201ENST00000378204 WDR97A6NE52 1622 aa17.4■□□□□ 0.38
EXT1-201ENST00000378204 GNAT3A8MTJ3 354 aa17.4■□□□□ 0.38
EXT1-201ENST00000378204 TMPOP42166 694 aaKnown RBP17.4■□□□□ 0.38
EXT1-201ENST00000378204 PRG4Q92954 1404 aaPredicted RBP17.4■□□□□ 0.38
EXT1-201ENST00000378204 FILIP1Q7Z7B0 1213 aa17.4■□□□□ 0.38
EXT1-201ENST00000378204 EZRP15311 586 aaKnown RBP17.4■□□□□ 0.38
EXT1-201ENST00000378204 RAB11FIP3O75154 756 aa17.4■□□□□ 0.38
EXT1-201ENST00000378204 PRDM11Q9NQV5 511 aa17.39■□□□□ 0.38
EXT1-201ENST00000378204 GBP2P32456 591 aaPredicted RBP17.39■□□□□ 0.37
EXT1-201ENST00000378204 EIF5P55010 431 aaKnown RBP17.39■□□□□ 0.37
EXT1-201ENST00000378204 GBP3Q9H0R5 595 aa17.39■□□□□ 0.37
EXT1-201ENST00000378204 GLRX3O76003 335 aaKnown RBP17.39■□□□□ 0.37
EXT1-201ENST00000378204 LUZP1Q86V48 1076 aa17.39■□□□□ 0.37
EXT1-201ENST00000378204 IL1RAPL2Q9NP60 686 aa17.39■□□□□ 0.37
EXT1-201ENST00000378204 IGHMBP2P38935 993 aaKnown RBP17.39■□□□□ 0.37
EXT1-201ENST00000378204 RRS1Q15050 365 aaKnown RBP17.39■□□□□ 0.37
EXT1-201ENST00000378204 ZSCAN29Q8IWY8 852 aaPredicted RBP17.39■□□□□ 0.37
EXT1-201ENST00000378204 STARD3NLO95772 234 aa17.38■□□□□ 0.37
EXT1-201ENST00000378204 POLA1P09884 1462 aaPredicted RBP17.38■□□□□ 0.37
EXT1-201ENST00000378204 KIF2AO00139 706 aaPredicted RBP17.38■□□□□ 0.37
EXT1-201ENST00000378204 HMGB2P26583 209 aaKnown RBP17.38■□□□□ 0.37
EXT1-201ENST00000378204 CFAP100Q494V2 611 aa17.38■□□□□ 0.37
EXT1-201ENST00000378204 SEPT11Q9NVA2 429 aaKnown RBP17.38■□□□□ 0.37
EXT1-201ENST00000378204 BRD2P25440 801 aaKnown RBP17.38■□□□□ 0.37
EXT1-201ENST00000378204 ZNF76P36508 570 aa17.38■□□□□ 0.37
EXT1-201ENST00000378204 NBPF8Q3BBV2 869 aa17.38■□□□□ 0.37
EXT1-201ENST00000378204 ARHGAP29Q52LW3 1261 aa17.38■□□□□ 0.37
EXT1-201ENST00000378204 TAX1BP1Q86VP1 789 aa17.38■□□□□ 0.37
EXT1-201ENST00000378204 AIDAQ96BJ3 306 aa17.38■□□□□ 0.37
EXT1-201ENST00000378204 MPNDQ8N594 471 aa17.38■□□□□ 0.37
EXT1-201ENST00000378204 RAI14Q9P0K7 980 aa17.38■□□□□ 0.37
EXT1-201ENST00000378204 IDH1O75874 414 aaKnown RBP17.38■□□□□ 0.37
EXT1-201ENST00000378204 TMEM57Q8N5G2 664 aa17.38■□□□□ 0.37
EXT1-201ENST00000378204 AKAP2Q9Y2D5 859 aa17.38■□□□□ 0.37
EXT1-201ENST00000378204 TROQ12816 1431 aaPredicted RBP17.38■□□□□ 0.37
EXT1-201ENST00000378204 CCDC102AQ96A19 550 aa17.37■□□□□ 0.37
EXT1-201ENST00000378204 PPP1R12BO60237 982 aaPredicted RBP17.37■□□□□ 0.37
EXT1-201ENST00000378204 SF3B2Q13435 895 aaKnown RBP17.37■□□□□ 0.37
EXT1-201ENST00000378204 CCDC61Q9Y6R9 512 aa17.37■□□□□ 0.37
EXT1-201ENST00000378204 NSD3Q9BZ95 1437 aa17.37■□□□□ 0.37
EXT1-201ENST00000378204 PPP1R1BQ9UD71 204 aaPredicted RBP17.36■□□□□ 0.37
EXT1-201ENST00000378204 CCDC196A0A1B0GTZ2 297 aa17.36■□□□□ 0.37
EXT1-201ENST00000378204 SYNJ1O43426 1573 aa17.36■□□□□ 0.37
EXT1-201ENST00000378204 ANKLE2Q86XL3 938 aa17.36■□□□□ 0.37
EXT1-201ENST00000378204 CCDC148Q8NFR7 591 aa17.36■□□□□ 0.37
EXT1-201ENST00000378204 UBXN4Q92575 508 aa17.36■□□□□ 0.37
EXT1-201ENST00000378204 SLFN5Q08AF3 891 aa17.36■□□□□ 0.37
EXT1-201ENST00000378204 JAKMIP3Q5VZ66 844 aa17.36■□□□□ 0.37
EXT1-201ENST00000378204 WDR66Q8TBY9 1149 aa17.36■□□□□ 0.37
EXT1-201ENST00000378204 TRERF1Q96PN7 1200 aa17.35■□□□□ 0.37
EXT1-201ENST00000378204 SLC26A8Q96RN1 970 aa17.35■□□□□ 0.37
EXT1-201ENST00000378204 EXOC6BQ9Y2D4 811 aa17.35■□□□□ 0.37
EXT1-201ENST00000378204 TAF4BQ92750 862 aa17.35■□□□□ 0.37
EXT1-201ENST00000378204 TRIM21P19474 475 aaKnown RBP17.35■□□□□ 0.37
EXT1-201ENST00000378204 ABCF2Q9UG63 623 aa17.35■□□□□ 0.37
EXT1-201ENST00000378204 POLR3GO15318 223 aaPredicted RBP17.34■□□□□ 0.37
EXT1-201ENST00000378204 SEC63Q9UGP8 760 aaKnown RBP17.34■□□□□ 0.37
EXT1-201ENST00000378204 ZNF652Q9Y2D9 606 aa17.34■□□□□ 0.37
EXT1-201ENST00000378204 MATR3P43243 847 aaKnown RBP eCLIP17.34■□□□□ 0.377e-7■■■□□ 15.2
EXT1-201ENST00000378204 METTL24Q5JXM2 366 aa17.34■□□□□ 0.37
EXT1-201ENST00000378204 KCNH5Q8NCM2 988 aa17.34■□□□□ 0.37
EXT1-201ENST00000378204 SCAND2PQ9GZW5 306 aaPredicted RBP17.34■□□□□ 0.37
EXT1-201ENST00000378204 SYCE3A1L190 88 aa17.34■□□□□ 0.37
EXT1-201ENST00000378204 POTEJP0CG39 1038 aa17.34■□□□□ 0.37
EXT1-201ENST00000378204 MPHOSPH10O00566 681 aaKnown RBP17.34■□□□□ 0.37
EXT1-201ENST00000378204 SFPQP23246 707 aaKnown RBP eCLIP17.34■□□□□ 0.373e-6■■■□□ 17.1
EXT1-201ENST00000378204 CETN2P41208 172 aa17.34■□□□□ 0.37
EXT1-201ENST00000378204 PPP4R3BQ5MIZ7 849 aa17.34■□□□□ 0.37
EXT1-201ENST00000378204 LARP1Q6PKG0 1096 aaKnown RBP17.34■□□□□ 0.37
EXT1-201ENST00000378204 SWAP70Q9UH65 585 aa17.33■□□□□ 0.37
EXT1-201ENST00000378204 DAPK1P53355 1430 aa17.33■□□□□ 0.37
EXT1-201ENST00000378204 FAM193AP78312 1265 aa17.33■□□□□ 0.37
EXT1-201ENST00000378204 IVLP07476 585 aa17.33■□□□□ 0.36
EXT1-201ENST00000378204 DUSP27Q5VZP5 1158 aa17.33■□□□□ 0.36
EXT1-201ENST00000378204 GTF2F1P35269 517 aaKnown RBP eCLIP17.33■□□□□ 0.363e-6■■■■□ 22.4
EXT1-201ENST00000378204 PLEKHH1Q9ULM0 1364 aa17.33■□□□□ 0.36
EXT1-201ENST00000378204 USP5P45974 858 aa17.33■□□□□ 0.36
EXT1-201ENST00000378204 SH2B1Q9NRF2 756 aaPredicted RBP17.33■□□□□ 0.36
EXT1-201ENST00000378204 NKTRP30414 1462 aaKnown RBP17.32■□□□□ 0.36
EXT1-201ENST00000378204 MX1P20591 662 aa17.32■□□□□ 0.36
EXT1-201ENST00000378204 ANO10Q9NW15 660 aa17.32■□□□□ 0.36
EXT1-201ENST00000378204 TOP2BQ02880 1626 aa17.32■□□□□ 0.36
EXT1-201ENST00000378204 ALDH1L2Q3SY69 923 aa17.32■□□□□ 0.36
EXT1-201ENST00000378204 CRACR2AQ9BSW2 395 aa17.32■□□□□ 0.36
EXT1-201ENST00000378204 NCAPD3P42695 1498 aa17.32■□□□□ 0.36
EXT1-201ENST00000378204 SEPT6Q14141 434 aa17.32■□□□□ 0.36
EXT1-201ENST00000378204 CCDC183Q5T5S1 534 aa17.32■□□□□ 0.36
EXT1-201ENST00000378204 ZSCAN12O43309 604 aa17.31■□□□□ 0.36
EXT1-201ENST00000378204 SPA17Q15506 151 aa17.31■□□□□ 0.36
EXT1-201ENST00000378204 PTPN14Q15678 1187 aa17.31■□□□□ 0.36
EXT1-201ENST00000378204 MAP9Q49MG5 647 aa17.31■□□□□ 0.36
EXT1-201ENST00000378204 ABCC11Q96J66 1382 aa17.31■□□□□ 0.36
EXT1-201ENST00000378204 TMOD2Q9NZR1 351 aa17.31■□□□□ 0.36
EXT1-201ENST00000378204 CCDC141Q6ZP82 1450 aa17.31■□□□□ 0.36
EXT1-201ENST00000378204 PIBF1Q8WXW3 757 aa17.31■□□□□ 0.36
EXT1-201ENST00000378204 LIG1P18858 919 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms