RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 NUP133Q8WUM0 1156 aa21.2■□□□□ 0.98
CLSTN1-202ENST00000377298 ABCF2Q9UG63 623 aa21.2■□□□□ 0.98
CLSTN1-202ENST00000377298 PRPF40AO75400 957 aaKnown RBP21.2■□□□□ 0.98
CLSTN1-202ENST00000377298 MBIPQ9NS73 344 aa21.2■□□□□ 0.98
CLSTN1-202ENST00000377298 TRIM27P14373 513 aa21.19■□□□□ 0.98
CLSTN1-202ENST00000377298 ASXL1Q8IXJ9 1541 aa21.19■□□□□ 0.98
CLSTN1-202ENST00000377298 SOGA3Q5TF21 947 aa21.19■□□□□ 0.98
CLSTN1-202ENST00000377298 STK11IPQ8N1F8 1099 aa21.19■□□□□ 0.98
CLSTN1-202ENST00000377298 LRRFIP2Q9Y608 721 aaKnown RBP21.19■□□□□ 0.98
CLSTN1-202ENST00000377298 HSP90AB2PQ58FF8 381 aa21.19■□□□□ 0.98
CLSTN1-202ENST00000377298 LARP1BQ659C4 914 aaKnown RBP21.19■□□□□ 0.98
CLSTN1-202ENST00000377298 MRE11P49959 708 aa21.19■□□□□ 0.98
CLSTN1-202ENST00000377298 ZNF592Q92610 1267 aa21.19■□□□□ 0.98
CLSTN1-202ENST00000377298 SNRPA1P09661 255 aaKnown RBP21.18■□□□□ 0.98
CLSTN1-202ENST00000377298 TOM1O60784 492 aa21.18■□□□□ 0.98
CLSTN1-202ENST00000377298 PIK3R4Q99570 1358 aa21.18■□□□□ 0.98
CLSTN1-202ENST00000377298 CAVIN1Q6NZI2 390 aaKnown RBP21.18■□□□□ 0.98
CLSTN1-202ENST00000377298 ZSCAN29Q8IWY8 852 aaPredicted RBP21.18■□□□□ 0.98
CLSTN1-202ENST00000377298 ANKRD18BA2A2Z9 1011 aa21.17■□□□□ 0.98
CLSTN1-202ENST00000377298 VSIG10Q8N0Z9 540 aa21.17■□□□□ 0.98
CLSTN1-202ENST00000377298 ZMYM3Q14202 1370 aa21.17■□□□□ 0.98
CLSTN1-202ENST00000377298 EPS15P42566 896 aa21.17■□□□□ 0.98
CLSTN1-202ENST00000377298 KRT85P78386 507 aa21.17■□□□□ 0.98
CLSTN1-202ENST00000377298 TMOD2Q9NZR1 351 aa21.17■□□□□ 0.98
CLSTN1-202ENST00000377298 U3KPZ7 1027 aaPredicted RBP21.17■□□□□ 0.98
CLSTN1-202ENST00000377298 C20orf194Q5TEA3 1177 aa21.17■□□□□ 0.98
CLSTN1-202ENST00000377298 SPINK5Q9NQ38 1064 aaPredicted RBP21.16■□□□□ 0.98
CLSTN1-202ENST00000377298 MAPKBP1O60336 1514 aa21.16■□□□□ 0.98
CLSTN1-202ENST00000377298 C19orf44Q9H6X5 657 aa21.16■□□□□ 0.98
CLSTN1-202ENST00000377298 ZNF287Q9HBT7 754 aa21.16■□□□□ 0.98
CLSTN1-202ENST00000377298 EIF2AK4Q9P2K8 1649 aaKnown RBP21.16■□□□□ 0.98
CLSTN1-202ENST00000377298 NOL7Q9UMY1 257 aaKnown RBP21.16■□□□□ 0.98
CLSTN1-202ENST00000377298 FAM83GA6ND36 823 aa21.15■□□□□ 0.98
CLSTN1-202ENST00000377298 PIP4K2AP48426 406 aaPredicted RBP21.15■□□□□ 0.98
CLSTN1-202ENST00000377298 KRI1Q8N9T8 703 aaKnown RBP21.15■□□□□ 0.98
CLSTN1-202ENST00000377298 BOLA2Q9H3K6 86 aa21.15■□□□□ 0.98
CLSTN1-202ENST00000377298 ZBTB3Q9H5J0 574 aa21.15■□□□□ 0.98
CLSTN1-202ENST00000377298 MAP3K2Q9Y2U5 619 aa21.15■□□□□ 0.98
CLSTN1-202ENST00000377298 SMARCA5O60264 1052 aaPredicted RBP21.15■□□□□ 0.98
CLSTN1-202ENST00000377298 SLC5A1P13866 664 aa21.15■□□□□ 0.98
CLSTN1-202ENST00000377298 NASPP49321 788 aaPredicted RBP21.15■□□□□ 0.98
CLSTN1-202ENST00000377298 CIZ1Q9ULV3 898 aaPredicted RBP21.15■□□□□ 0.98
CLSTN1-202ENST00000377298 CEBPZQ03701 1054 aaKnown RBP21.14■□□□□ 0.98
CLSTN1-202ENST00000377298 BRPF3Q9ULD4 1205 aa21.14■□□□□ 0.98
CLSTN1-202ENST00000377298 DISP1Q96F81 1524 aa21.14■□□□□ 0.98
CLSTN1-202ENST00000377298 CFAP43Q8NDM7 1665 aa21.14■□□□□ 0.98
CLSTN1-202ENST00000377298 WASF1Q92558 559 aa21.14■□□□□ 0.97
CLSTN1-202ENST00000377298 OFD1O75665 1012 aa21.14■□□□□ 0.97
CLSTN1-202ENST00000377298 MAP3K12Q12852 859 aa21.13■□□□□ 0.97
CLSTN1-202ENST00000377298 ZCRB1Q8TBF4 217 aaKnown RBP21.13■□□□□ 0.97
CLSTN1-202ENST00000377298 CWC25Q9NXE8 425 aaPredicted RBP21.13■□□□□ 0.97
CLSTN1-202ENST00000377298 IL27Q8NEV9 243 aa21.13■□□□□ 0.97
CLSTN1-202ENST00000377298 TBX22Q9Y458 520 aa21.13■□□□□ 0.97
CLSTN1-202ENST00000377298 RNF214Q8ND24 703 aa21.12■□□□□ 0.97
CLSTN1-202ENST00000377298 ANKIB1Q9P2G1 1089 aa21.12■□□□□ 0.97
CLSTN1-202ENST00000377298 KRT18P05783 430 aaKnown RBP21.12■□□□□ 0.97
CLSTN1-202ENST00000377298 ME1P48163 572 aa21.12■□□□□ 0.97
CLSTN1-202ENST00000377298 ARHGAP45Q92619 1136 aa21.12■□□□□ 0.97
CLSTN1-202ENST00000377298 FBLN1P23142 703 aa21.12■□□□□ 0.97
CLSTN1-202ENST00000377298 TSPY26PQ9H489 355 aa21.12■□□□□ 0.97
CLSTN1-202ENST00000377298 GPS2Q13227 327 aa21.12■□□□□ 0.97
CLSTN1-202ENST00000377298 FILIP1LQ4L180 1135 aa21.12■□□□□ 0.97
CLSTN1-202ENST00000377298 PI4KAP2A4QPH2 592 aa21.12■□□□□ 0.97
CLSTN1-202ENST00000377298 PI4KAP1Q8N8J0 262 aa21.12■□□□□ 0.97
CLSTN1-202ENST00000377298 CASTP20810 708 aaKnown RBP21.11■□□□□ 0.97
CLSTN1-202ENST00000377298 RPGRQ92834 1020 aaKnown RBP21.11■□□□□ 0.97
CLSTN1-202ENST00000377298 CCDC8Q9H0W5 538 aaPredicted RBP21.11■□□□□ 0.97
CLSTN1-202ENST00000377298 GPTP24298 496 aa21.11■□□□□ 0.97
CLSTN1-202ENST00000377298 FAM43AQ8N2R8 423 aa21.11■□□□□ 0.97
CLSTN1-202ENST00000377298 TRIM5Q9C035 493 aa21.11■□□□□ 0.97
CLSTN1-202ENST00000377298 CFAP45Q9UL16 551 aa21.11■□□□□ 0.97
CLSTN1-202ENST00000377298 FAM13BQ9NYF5 915 aa21.1■□□□□ 0.97
CLSTN1-202ENST00000377298 AKAP4Q5JQC9 854 aa21.1■□□□□ 0.97
CLSTN1-202ENST00000377298 FLT4P35916 1363 aa21.1■□□□□ 0.97
CLSTN1-202ENST00000377298 PPP1R42Q7Z4L9 355 aa21.1■□□□□ 0.97
CLSTN1-202ENST00000377298 CDC5LQ99459 802 aaKnown RBP21.1■□□□□ 0.97
CLSTN1-202ENST00000377298 MAGEC2Q9UBF1 373 aaPredicted RBP21.1■□□□□ 0.97
CLSTN1-202ENST00000377298 POLR3AO14802 1390 aaPredicted RBP21.09■□□□□ 0.97
CLSTN1-202ENST00000377298 AK7Q96M32 723 aa21.09■□□□□ 0.97
CLSTN1-202ENST00000377298 CCDC39Q9UFE4 941 aa21.09■□□□□ 0.97
CLSTN1-202ENST00000377298 NPATQ14207 1427 aa21.09■□□□□ 0.97
CLSTN1-202ENST00000377298 USP5P45974 858 aa21.09■□□□□ 0.97
CLSTN1-202ENST00000377298 POLKQ9UBT6 870 aa21.09■□□□□ 0.97
CLSTN1-202ENST00000377298 NAP1L1P55209 391 aaKnown RBP21.09■□□□□ 0.97
CLSTN1-202ENST00000377298 EIF4A2Q14240 407 aaKnown RBP21.09■□□□□ 0.97
CLSTN1-202ENST00000377298 TESK2Q96S53 571 aa21.09■□□□□ 0.97
CLSTN1-202ENST00000377298 ARHGEF12Q9NZN5 1544 aa21.09■□□□□ 0.97
CLSTN1-202ENST00000377298 PDILTQ8N807 584 aa21.09■□□□□ 0.97
CLSTN1-202ENST00000377298 NAPBQ9H115 298 aa21.09■□□□□ 0.97
CLSTN1-202ENST00000377298 UBAP1LF5GYI3 381 aa21.08■□□□□ 0.97
CLSTN1-202ENST00000377298 TMEM132AQ24JP5 1023 aa21.08■□□□□ 0.97
CLSTN1-202ENST00000377298 ANKRD13DQ6ZTN6 518 aa21.08■□□□□ 0.97
CLSTN1-202ENST00000377298 DZIP1Q86YF9 867 aaKnown RBP21.08■□□□□ 0.97
CLSTN1-202ENST00000377298 CT47A1Q5JQC4 288 aaPredicted RBP21.08■□□□□ 0.97
CLSTN1-202ENST00000377298 ECHDC1Q9NTX5 307 aa21.08■□□□□ 0.97
CLSTN1-202ENST00000377298 TRPM2O94759 1503 aa21.08■□□□□ 0.96
CLSTN1-202ENST00000377298 PRPF40BQ6NWY9 871 aaKnown RBP21.08■□□□□ 0.96
CLSTN1-202ENST00000377298 ATP10AO60312 1499 aa21.07■□□□□ 0.96
CLSTN1-202ENST00000377298 UBE3BQ7Z3V4 1068 aa21.07■□□□□ 0.96
CLSTN1-202ENST00000377298 DACH1Q9UI36 760 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms