RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 SHANK3Q9BYB0 1731 aa13.59□□□□□ -0.23
C9orf85-202ENST00000377027 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.59□□□□□ -0.23
C9orf85-202ENST00000377027 KCNH5Q8NCM2 988 aa13.59□□□□□ -0.23
C9orf85-202ENST00000377027 TESK2Q96S53 571 aa13.59□□□□□ -0.23
C9orf85-202ENST00000377027 CARD10Q9BWT7 1032 aa13.59□□□□□ -0.23
C9orf85-202ENST00000377027 SLC12A5Q9H2X9 1139 aa13.59□□□□□ -0.23
C9orf85-202ENST00000377027 PAPPAQ13219 1627 aa13.59□□□□□ -0.23
C9orf85-202ENST00000377027 FAM208AQ9UK61 1670 aaKnown RBP13.59□□□□□ -0.23
C9orf85-202ENST00000377027 EDC4Q6P2E9 1401 aaKnown RBP13.58□□□□□ -0.24
C9orf85-202ENST00000377027 MFSD10Q14728 455 aa13.58□□□□□ -0.24
C9orf85-202ENST00000377027 ERBB3P21860 1342 aa13.58□□□□□ -0.24
C9orf85-202ENST00000377027 BTAF1O14981 1849 aa13.57□□□□□ -0.24
C9orf85-202ENST00000377027 TONSLQ96HA7 1378 aa13.57□□□□□ -0.24
C9orf85-202ENST00000377027 SNPHO15079 494 aa13.56□□□□□ -0.24
C9orf85-202ENST00000377027 PLPP6Q8IY26 295 aa13.56□□□□□ -0.24
C9orf85-202ENST00000377027 DDX27Q96GQ7 796 aaKnown RBP13.56□□□□□ -0.24
C9orf85-202ENST00000377027 PDGFDQ9GZP0 370 aaPredicted RBP13.56□□□□□ -0.24
C9orf85-202ENST00000377027 CCDC7Q96M83 1385 aa13.56□□□□□ -0.24
C9orf85-202ENST00000377027 PLSCR1O15162 318 aa13.55□□□□□ -0.24
C9orf85-202ENST00000377027 HOXB3P14651 431 aaPredicted RBP13.55□□□□□ -0.24
C9orf85-202ENST00000377027 PPP1R15BQ5SWA1 713 aa13.55□□□□□ -0.24
C9orf85-202ENST00000377027 MYOM1P52179 1685 aa13.55□□□□□ -0.24
C9orf85-202ENST00000377027 KCNQ2O43526 872 aa13.53□□□□□ -0.24
C9orf85-202ENST00000377027 CSB-PGBD3P0DP91 1061 aa13.53□□□□□ -0.24
C9orf85-202ENST00000377027 TMC1Q8TDI8 760 aa13.53□□□□□ -0.24
C9orf85-202ENST00000377027 CDCA7Q9BWT1 371 aaPredicted RBP13.53□□□□□ -0.24
C9orf85-202ENST00000377027 TUBGCP6Q96RT7 1819 aa13.53□□□□□ -0.24
C9orf85-202ENST00000377027 ST20-MTHFSA0A0A6YYL1 179 aa13.52□□□□□ -0.25
C9orf85-202ENST00000377027 C11orf95C9JLR9 678 aaPredicted RBP13.52□□□□□ -0.25
C9orf85-202ENST00000377027 DOT1LQ8TEK3 1739 aa13.52□□□□□ -0.25
C9orf85-202ENST00000377027 KIF20BQ96Q89 1820 aa13.52□□□□□ -0.25
C9orf85-202ENST00000377027 FBLN1P23142 703 aa13.51□□□□□ -0.25
C9orf85-202ENST00000377027 ANKRD24Q8TF21 1146 aa13.51□□□□□ -0.25
C9orf85-202ENST00000377027 PUS7Q96PZ0 661 aaKnown RBP13.51□□□□□ -0.25
C9orf85-202ENST00000377027 GOLGB1Q14789 3259 aaKnown RBP13.51□□□□□ -0.25
C9orf85-202ENST00000377027 DOK7Q18PE1 504 aa13.5□□□□□ -0.25
C9orf85-202ENST00000377027 NBPF14Q5TI25 921 aa13.5□□□□□ -0.25
C9orf85-202ENST00000377027 HDGFL2Q7Z4V5 671 aaPredicted RBP13.5□□□□□ -0.25
C9orf85-202ENST00000377027 EXOC5O00471 708 aa13.49□□□□□ -0.25
C9orf85-202ENST00000377027 TXNRD1Q16881 649 aa13.49□□□□□ -0.25
C9orf85-202ENST00000377027 NLRP2Q9NX02 1062 aa13.49□□□□□ -0.25
C9orf85-202ENST00000377027 LY75O60449 1722 aa13.49□□□□□ -0.25
C9orf85-202ENST00000377027 NINLQ9Y2I6 1382 aa13.48□□□□□ -0.25
C9orf85-202ENST00000377027 QSER1Q2KHR3 1735 aa13.48□□□□□ -0.25
C9orf85-202ENST00000377027 ACSBG1Q96GR2 724 aa13.48□□□□□ -0.25
C9orf85-202ENST00000377027 TERF2IPQ9NYB0 399 aa13.48□□□□□ -0.25
C9orf85-202ENST00000377027 MEGF6O75095 1541 aa13.48□□□□□ -0.25
C9orf85-202ENST00000377027 COL24A1Q17RW2 1714 aa13.47□□□□□ -0.25
C9orf85-202ENST00000377027 ANKRD36BQ8N2N9 1353 aa13.47□□□□□ -0.25
C9orf85-202ENST00000377027 MAP3K19Q56UN5 1328 aa13.47□□□□□ -0.25
C9orf85-202ENST00000377027 SLC34A2O95436 690 aa13.47□□□□□ -0.25
C9orf85-202ENST00000377027 IL2RBP14784 551 aa13.47□□□□□ -0.25
C9orf85-202ENST00000377027 PTGER2P43116 358 aa13.47□□□□□ -0.25
C9orf85-202ENST00000377027 IP6K1Q92551 441 aa13.47□□□□□ -0.25
C9orf85-202ENST00000377027 WDR70Q9NW82 654 aa13.47□□□□□ -0.25
C9orf85-202ENST00000377027 KAT6BQ8WYB5 2073 aa13.47□□□□□ -0.25
C9orf85-202ENST00000377027 USP47Q96K76 1375 aa13.46□□□□□ -0.25
C9orf85-202ENST00000377027 FAM163AQ96GL9 167 aaPredicted RBP13.46□□□□□ -0.25
C9orf85-202ENST00000377027 SPON1Q9HCB6 807 aa13.46□□□□□ -0.25
C9orf85-202ENST00000377027 NSD2O96028 1365 aa13.45□□□□□ -0.26
C9orf85-202ENST00000377027 ANKRD26Q9UPS8 1709 aa13.45□□□□□ -0.26
C9orf85-202ENST00000377027 HOXC9P31274 260 aa13.45□□□□□ -0.26
C9orf85-202ENST00000377027 LRRC4BQ9NT99 713 aa13.45□□□□□ -0.26
C9orf85-202ENST00000377027 TOGARAM1Q9Y4F4 1720 aa13.44□□□□□ -0.26
C9orf85-202ENST00000377027 ZBTB7AO95365 584 aa13.44□□□□□ -0.26
C9orf85-202ENST00000377027 SLC15A2Q16348 729 aa13.44□□□□□ -0.26
C9orf85-202ENST00000377027 ZNF827Q17R98 1081 aa13.44□□□□□ -0.26
C9orf85-202ENST00000377027 VSIG10Q8N0Z9 540 aa13.44□□□□□ -0.26
C9orf85-202ENST00000377027 CAMK2BQ13554 666 aa13.43□□□□□ -0.26
C9orf85-202ENST00000377027 ZNF710Q8N1W2 664 aa13.43□□□□□ -0.26
C9orf85-202ENST00000377027 LTV1Q96GA3 475 aaPredicted RBP13.43□□□□□ -0.26
C9orf85-202ENST00000377027 RIMBP2O15034 1052 aa13.42□□□□□ -0.26
C9orf85-202ENST00000377027 FYB1O15117 783 aa13.42□□□□□ -0.26
C9orf85-202ENST00000377027 ST18O60284 1047 aa13.42□□□□□ -0.26
C9orf85-202ENST00000377027 RRS1Q15050 365 aaKnown RBP13.42□□□□□ -0.26
C9orf85-202ENST00000377027 ZSWIM6Q9HCJ5 1215 aa13.42□□□□□ -0.26
C9orf85-202ENST00000377027 RTL1A6NKG5 1358 aa13.42□□□□□ -0.26
C9orf85-202ENST00000377027 TRIM26Q12899 539 aaPredicted RBP13.41□□□□□ -0.26
C9orf85-202ENST00000377027 LCE2DQ5TA82 110 aaPredicted RBP13.41□□□□□ -0.26
C9orf85-202ENST00000377027 PTCD2Q8WV60 388 aaKnown RBP13.41□□□□□ -0.26
C9orf85-202ENST00000377027 COG3Q96JB2 828 aa13.41□□□□□ -0.26
C9orf85-202ENST00000377027 GGNBP2Q9H3C7 697 aa13.41□□□□□ -0.26
C9orf85-202ENST00000377027 PKD1L3Q7Z443 1732 aa13.41□□□□□ -0.26
C9orf85-202ENST00000377027 STK32BQ9NY57 414 aa13.4□□□□□ -0.26
C9orf85-202ENST00000377027 ITGB4P16144 1822 aa13.39□□□□□ -0.27
C9orf85-202ENST00000377027 TAF1LQ8IZX4 1826 aa13.39□□□□□ -0.27
C9orf85-202ENST00000377027 E2F4Q16254 413 aa13.39□□□□□ -0.27
C9orf85-202ENST00000377027 NBPF6Q5VWK0 638 aa13.39□□□□□ -0.27
C9orf85-202ENST00000377027 GPR153Q6NV75 609 aa13.39□□□□□ -0.27
C9orf85-202ENST00000377027 USHBP1Q8N6Y0 703 aa13.39□□□□□ -0.27
C9orf85-202ENST00000377027 OXER1Q8TDS5 423 aa13.39□□□□□ -0.27
C9orf85-202ENST00000377027 NBPF4Q96M43 638 aa13.39□□□□□ -0.27
C9orf85-202ENST00000377027 CARD14Q9BXL6 1004 aa13.39□□□□□ -0.27
C9orf85-202ENST00000377027 EMILIN3Q9NT22 766 aa13.39□□□□□ -0.27
C9orf85-202ENST00000377027 PPP1R1BQ9UD71 204 aaPredicted RBP13.39□□□□□ -0.27
C9orf85-202ENST00000377027 KCNQ4P56696 695 aa13.38□□□□□ -0.27
C9orf85-202ENST00000377027 DDX54Q8TDD1 881 aaKnown RBP13.38□□□□□ -0.27
C9orf85-202ENST00000377027 PCDHGA4Q9Y5G9 962 aa13.38□□□□□ -0.27
C9orf85-202ENST00000377027 MAP2P11137 1827 aaKnown RBP13.38□□□□□ -0.27
C9orf85-202ENST00000377027 NCAPD2Q15021 1401 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms