RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 ARHGAP45Q92619 1136 aa24.78■■□□□ 1.56
TMEFF1-201ENST00000374879 ERC2O15083 957 aa24.77■■□□□ 1.56
TMEFF1-201ENST00000374879 TCHHQ07283 1943 aa24.77■■□□□ 1.56
TMEFF1-201ENST00000374879 SYCP1Q15431 976 aa24.77■■□□□ 1.56
TMEFF1-201ENST00000374879 TAF7LQ5H9L4 462 aa24.77■■□□□ 1.56
TMEFF1-201ENST00000374879 CDK19Q9BWU1 502 aa24.77■■□□□ 1.56
TMEFF1-201ENST00000374879 TIGD1Q96MW7 591 aa24.77■■□□□ 1.56
TMEFF1-201ENST00000374879 ANKRD26Q9UPS8 1709 aa24.76■■□□□ 1.55
TMEFF1-201ENST00000374879 DIAPH1O60610 1272 aaKnown RBP24.76■■□□□ 1.55
TMEFF1-201ENST00000374879 CLTCQ00610 1675 aaKnown RBP24.76■■□□□ 1.55
TMEFF1-201ENST00000374879 VAMP4O75379 141 aa24.76■■□□□ 1.55
TMEFF1-201ENST00000374879 TPM3P06753 285 aa24.76■■□□□ 1.55
TMEFF1-201ENST00000374879 KIF18AQ8NI77 898 aa24.76■■□□□ 1.55
TMEFF1-201ENST00000374879 CABP1Q9NZU7 370 aa24.76■■□□□ 1.55
TMEFF1-201ENST00000374879 STAG3Q9UJ98 1225 aa24.76■■□□□ 1.55
TMEFF1-201ENST00000374879 PTCH1Q13635 1447 aa24.75■■□□□ 1.55
TMEFF1-201ENST00000374879 ABCC4O15439 1325 aa24.75■■□□□ 1.55
TMEFF1-201ENST00000374879 TSPYL6Q8N831 410 aa24.74■■□□□ 1.55
TMEFF1-201ENST00000374879 APBB1O00213 710 aa24.74■■□□□ 1.55
TMEFF1-201ENST00000374879 MCM2P49736 904 aa24.74■■□□□ 1.55
TMEFF1-201ENST00000374879 INTS4Q96HW7 963 aaKnown RBP24.74■■□□□ 1.55
TMEFF1-201ENST00000374879 ALKQ9UM73 1620 aa24.74■■□□□ 1.55
TMEFF1-201ENST00000374879 ELL2O00472 640 aaPredicted RBP24.73■■□□□ 1.55
TMEFF1-201ENST00000374879 ZNF428Q96B54 188 aa24.73■■□□□ 1.55
TMEFF1-201ENST00000374879 GIMAP6Q6P9H5 292 aa24.73■■□□□ 1.55
TMEFF1-201ENST00000374879 C16orf45Q96MC5 204 aaPredicted RBP24.73■■□□□ 1.55
TMEFF1-201ENST00000374879 DNAJC2Q99543 621 aaKnown RBP24.73■■□□□ 1.55
TMEFF1-201ENST00000374879 CNPY2Q9Y2B0 182 aa24.73■■□□□ 1.55
TMEFF1-201ENST00000374879 SMTNL1A8MU46 457 aa24.72■■□□□ 1.55
TMEFF1-201ENST00000374879 FUCA2Q9BTY2 467 aa24.72■■□□□ 1.55
TMEFF1-201ENST00000374879 ERICH4A6NGS2 130 aa24.72■■□□□ 1.55
TMEFF1-201ENST00000374879 PTGS1P23219 599 aa24.72■■□□□ 1.55
TMEFF1-201ENST00000374879 SLC20A2Q08357 652 aa24.72■■□□□ 1.55
TMEFF1-201ENST00000374879 ARHGEF40Q8TER5 1519 aa24.71■■□□□ 1.55
TMEFF1-201ENST00000374879 PNPLA6Q8IY17 1366 aa24.71■■□□□ 1.55
TMEFF1-201ENST00000374879 CAPN2P17655 700 aa24.71■■□□□ 1.55
TMEFF1-201ENST00000374879 KNDC1Q76NI1 1749 aa24.71■■□□□ 1.55
TMEFF1-201ENST00000374879 GOLGA6L6A8MZA4 724 aa24.7■■□□□ 1.55
TMEFF1-201ENST00000374879 KRT222Q8N1A0 295 aa24.7■■□□□ 1.55
TMEFF1-201ENST00000374879 TMEM87AQ8NBN3 555 aa24.7■■□□□ 1.55
TMEFF1-201ENST00000374879 SRCIN1Q9C0H9 1055 aa24.7■■□□□ 1.55
TMEFF1-201ENST00000374879 WDR33Q9C0J8 1336 aaKnown RBP24.7■■□□□ 1.54
TMEFF1-201ENST00000374879 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.69■■□□□ 1.54
TMEFF1-201ENST00000374879 PALD1Q9ULE6 856 aa24.69■■□□□ 1.54
TMEFF1-201ENST00000374879 TNNT1P13805 278 aa24.67■■□□□ 1.54
TMEFF1-201ENST00000374879 TULP2O00295 520 aa24.67■■□□□ 1.54
TMEFF1-201ENST00000374879 FBLN1P23142 703 aa24.67■■□□□ 1.54
TMEFF1-201ENST00000374879 UBE2HP62256 183 aa24.66■■□□□ 1.54
TMEFF1-201ENST00000374879 LRMPQ12912 555 aa24.66■■□□□ 1.54
TMEFF1-201ENST00000374879 WAPLQ7Z5K2 1190 aa24.66■■□□□ 1.54
TMEFF1-201ENST00000374879 KIF20BQ96Q89 1820 aa24.66■■□□□ 1.54
TMEFF1-201ENST00000374879 RPAP1Q9BWH6 1393 aaPredicted RBP24.66■■□□□ 1.54
TMEFF1-201ENST00000374879 FCHSD2O94868 740 aa24.65■■□□□ 1.54
TMEFF1-201ENST00000374879 CCDC112Q8NEF3 446 aa24.65■■□□□ 1.54
TMEFF1-201ENST00000374879 THUMPD2Q9BTF0 503 aaKnown RBP24.65■■□□□ 1.54
TMEFF1-201ENST00000374879 IFT57Q9NWB7 429 aa24.65■■□□□ 1.54
TMEFF1-201ENST00000374879 CALCOCO1Q9P1Z2 691 aa24.65■■□□□ 1.54
TMEFF1-201ENST00000374879 CHMP4AQ9BY43 222 aa24.65■■□□□ 1.54
TMEFF1-201ENST00000374879 KMT5BQ4FZB7 885 aa24.65■■□□□ 1.54
TMEFF1-201ENST00000374879 PRKAR2BP31323 418 aa24.64■■□□□ 1.54
TMEFF1-201ENST00000374879 RTL1A6NKG5 1358 aa24.64■■□□□ 1.53
TMEFF1-201ENST00000374879 ANKRD44Q8N8A2 993 aa24.64■■□□□ 1.53
TMEFF1-201ENST00000374879 CCDC186Q7Z3E2 898 aa24.63■■□□□ 1.53
TMEFF1-201ENST00000374879 UPF3BQ9BZI7 483 aaKnown RBP24.63■■□□□ 1.53
TMEFF1-201ENST00000374879 ST7Q9NRC1 585 aa24.63■■□□□ 1.53
TMEFF1-201ENST00000374879 POLKQ9UBT6 870 aa24.63■■□□□ 1.53
TMEFF1-201ENST00000374879 LRRC7Q96NW7 1537 aa24.63■■□□□ 1.53
TMEFF1-201ENST00000374879 TRERF1Q96PN7 1200 aa24.63■■□□□ 1.53
TMEFF1-201ENST00000374879 PAXBP1Q9Y5B6 917 aa24.63■■□□□ 1.53
TMEFF1-201ENST00000374879 PAXIP1Q6ZW49 1069 aaPredicted RBP24.62■■□□□ 1.53
TMEFF1-201ENST00000374879 CYB5RLQ6IPT4 315 aa24.61■■□□□ 1.53
TMEFF1-201ENST00000374879 API5Q9BZZ5 524 aaKnown RBP24.61■■□□□ 1.53
TMEFF1-201ENST00000374879 FAM53CQ9NYF3 392 aa24.61■■□□□ 1.53
TMEFF1-201ENST00000374879 FIBPO43427 364 aa24.61■■□□□ 1.53
TMEFF1-201ENST00000374879 ZNF397Q8NF99 534 aaPredicted RBP24.61■■□□□ 1.53
TMEFF1-201ENST00000374879 TRIM6-TRIM34B2RNG4 842 aa24.6■■□□□ 1.53
TMEFF1-201ENST00000374879 TRIM34Q9BYJ4 488 aa24.6■■□□□ 1.53
TMEFF1-201ENST00000374879 NRBP1Q9UHY1 535 aa24.6■■□□□ 1.53
TMEFF1-201ENST00000374879 CDC42BPGQ6DT37 1551 aa24.59■■□□□ 1.53
TMEFF1-201ENST00000374879 FAM135BQ49AJ0 1406 aa24.59■■□□□ 1.53
TMEFF1-201ENST00000374879 CEP85Q6P2H3 762 aa24.59■■□□□ 1.53
TMEFF1-201ENST00000374879 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.59■■□□□ 1.53
TMEFF1-201ENST00000374879 V9GYY5 206 aaPredicted RBP24.59■■□□□ 1.53
TMEFF1-201ENST00000374879 HMOX1P09601 288 aa24.58■■□□□ 1.53
TMEFF1-201ENST00000374879 MCCP23508 829 aa24.58■■□□□ 1.53
TMEFF1-201ENST00000374879 FAM69CQ0P6D2 419 aa24.58■■□□□ 1.53
TMEFF1-201ENST00000374879 ZNF592Q92610 1267 aa24.58■■□□□ 1.53
TMEFF1-201ENST00000374879 ESYT1Q9BSJ8 1104 aa24.58■■□□□ 1.53
TMEFF1-201ENST00000374879 ATP10DQ9P241 1426 aa24.58■■□□□ 1.53
TMEFF1-201ENST00000374879 ATP7BP35670 1465 aa24.58■■□□□ 1.53
TMEFF1-201ENST00000374879 RBM6P78332 1123 aaKnown RBP24.58■■□□□ 1.52
TMEFF1-201ENST00000374879 TWISTNBQ3B726 338 aaPredicted RBP24.58■■□□□ 1.52
TMEFF1-201ENST00000374879 RGS12O14924 1447 aa24.58■■□□□ 1.52
TMEFF1-201ENST00000374879 A2ML1A8K2U0 1454 aa24.57■■□□□ 1.52
TMEFF1-201ENST00000374879 ZSCAN22P10073 491 aaPredicted RBP24.57■■□□□ 1.52
TMEFF1-201ENST00000374879 TPD52L1Q16890 204 aaPredicted RBP24.57■■□□□ 1.52
TMEFF1-201ENST00000374879 PHACTR3Q96KR7 559 aa24.57■■□□□ 1.52
TMEFF1-201ENST00000374879 DLC1Q96QB1 1528 aa24.56■■□□□ 1.52
TMEFF1-201ENST00000374879 RPAP2Q8IXW5 612 aaPredicted RBP24.56■■□□□ 1.52
TMEFF1-201ENST00000374879 MBIPQ9NS73 344 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms