RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 BAG6P46379 1132 aa19.78■□□□□ 0.76
HSPG2-201ENST00000374673 RRP7AQ9Y3A4 280 aaKnown RBP19.78■□□□□ 0.76
HSPG2-201ENST00000374673 RREB1Q92766 1687 aa19.78■□□□□ 0.76
HSPG2-201ENST00000374673 MCM10Q7L590 875 aa19.77■□□□□ 0.76
HSPG2-201ENST00000374673 NFATC2IPQ8NCF5 419 aa19.77■□□□□ 0.76
HSPG2-201ENST00000374673 TEFQ10587 303 aa19.76■□□□□ 0.75
HSPG2-201ENST00000374673 DCTN1Q14203 1278 aa19.76■□□□□ 0.75
HSPG2-201ENST00000374673 NEUROD2Q15784 382 aa19.76■□□□□ 0.75
HSPG2-201ENST00000374673 NCBP3Q53F19 620 aaKnown RBP19.76■□□□□ 0.75
HSPG2-201ENST00000374673 TRIM35Q9UPQ4 493 aa19.75■□□□□ 0.75
HSPG2-201ENST00000374673 DEFB132Q7Z7B7 95 aa19.74■□□□□ 0.75
HSPG2-201ENST00000374673 SMARCC1Q92922 1105 aaPredicted RBP19.74■□□□□ 0.75
HSPG2-201ENST00000374673 CAMKK2Q96RR4 588 aa19.74■□□□□ 0.75
HSPG2-201ENST00000374673 UBR2Q8IWV8 1755 aa19.74■□□□□ 0.75
HSPG2-201ENST00000374673 ZNF831Q5JPB2 1677 aa19.73■□□□□ 0.75
HSPG2-201ENST00000374673 EN1Q05925 392 aaPredicted RBP19.73■□□□□ 0.75
HSPG2-201ENST00000374673 KDM3BQ7LBC6 1761 aa19.72■□□□□ 0.75
HSPG2-201ENST00000374673 PALLDQ8WX93 1383 aa19.72■□□□□ 0.75
HSPG2-201ENST00000374673 CCDC27Q2M243 656 aa19.72■□□□□ 0.75
HSPG2-201ENST00000374673 NUP188Q5SRE5 1749 aa19.72■□□□□ 0.75
HSPG2-201ENST00000374673 ATG3Q9NT62 314 aa19.72■□□□□ 0.75
HSPG2-201ENST00000374673 EZH2Q15910 746 aaKnown RBP19.71■□□□□ 0.75
HSPG2-201ENST00000374673 THUMPD2Q9BTF0 503 aaKnown RBP19.71■□□□□ 0.75
HSPG2-201ENST00000374673 ASAP1Q9ULH1 1129 aa19.71■□□□□ 0.75
HSPG2-201ENST00000374673 CICQ96RK0 1608 aaPredicted RBP19.71■□□□□ 0.75
HSPG2-201ENST00000374673 NGEFQ8N5V2 710 aa19.7■□□□□ 0.74
HSPG2-201ENST00000374673 TAF1LQ8IZX4 1826 aa19.69■□□□□ 0.74
HSPG2-201ENST00000374673 TAF7Q15545 349 aaPredicted RBP19.69■□□□□ 0.74
HSPG2-201ENST00000374673 TXNRD1Q16881 649 aa19.69■□□□□ 0.74
HSPG2-201ENST00000374673 KCPQ6ZWJ8 1503 aa19.69■□□□□ 0.74
HSPG2-201ENST00000374673 BTBD11A6QL63 1104 aa19.68■□□□□ 0.74
HSPG2-201ENST00000374673 PROM2Q8N271 834 aa19.68■□□□□ 0.74
HSPG2-201ENST00000374673 C5P01031 1676 aa19.68■□□□□ 0.74
HSPG2-201ENST00000374673 SLC39A6Q13433 755 aa19.67■□□□□ 0.74
HSPG2-201ENST00000374673 SLC27A3Q5K4L6 730 aa19.67■□□□□ 0.74
HSPG2-201ENST00000374673 TJP1Q07157 1748 aa19.66■□□□□ 0.74
HSPG2-201ENST00000374673 SENP3-EIF4A1A0A087X0R7 540 aa19.66■□□□□ 0.74
HSPG2-201ENST00000374673 ZNF790Q6PG37 636 aa19.66■□□□□ 0.74
HSPG2-201ENST00000374673 WWC1Q8IX03 1113 aa19.66■□□□□ 0.74
HSPG2-201ENST00000374673 BABAM1Q9NWV8 329 aa19.66■□□□□ 0.74
HSPG2-201ENST00000374673 COL5A3P25940 1745 aaPredicted RBP19.65■□□□□ 0.74
HSPG2-201ENST00000374673 LOC102724428A0A0B4J2F2 783 aa19.65■□□□□ 0.74
HSPG2-201ENST00000374673 SIK1P57059 783 aa19.65■□□□□ 0.74
HSPG2-201ENST00000374673 CALD1Q05682 793 aaKnown RBP19.65■□□□□ 0.74
HSPG2-201ENST00000374673 TTC5Q8N0Z6 440 aa19.65■□□□□ 0.74
HSPG2-201ENST00000374673 CCNL1Q9UK58 526 aaPredicted RBP19.65■□□□□ 0.74
HSPG2-201ENST00000374673 LRRC4BQ9NT99 713 aa19.64■□□□□ 0.73
HSPG2-201ENST00000374673 RBM42Q9BTD8 480 aaKnown RBP19.63■□□□□ 0.73
HSPG2-201ENST00000374673 SALL2Q9Y467 1007 aaPredicted RBP19.63■□□□□ 0.73
HSPG2-201ENST00000374673 CHL1O00533 1208 aa19.62■□□□□ 0.73
HSPG2-201ENST00000374673 KCNQ3O43525 872 aa19.62■□□□□ 0.73
HSPG2-201ENST00000374673 PTCD1O75127 700 aaKnown RBP19.62■□□□□ 0.73
HSPG2-201ENST00000374673 CFAP44Q96MT7 982 aa19.62■□□□□ 0.73
HSPG2-201ENST00000374673 SLC4A9Q96Q91 983 aa19.62■□□□□ 0.73
HSPG2-201ENST00000374673 MIS18AQ9NYP9 233 aa19.62■□□□□ 0.73
HSPG2-201ENST00000374673 ZNF521Q96K83 1311 aa19.61■□□□□ 0.73
HSPG2-201ENST00000374673 ZNF853P0CG23 659 aa19.61■□□□□ 0.73
HSPG2-201ENST00000374673 HMGB2P26583 209 aaKnown RBP19.61■□□□□ 0.73
HSPG2-201ENST00000374673 ATP6V1AP38606 617 aa19.61■□□□□ 0.73
HSPG2-201ENST00000374673 WDR63Q8IWG1 891 aa19.61■□□□□ 0.73
HSPG2-201ENST00000374673 VSIG10Q8N0Z9 540 aa19.61■□□□□ 0.73
HSPG2-201ENST00000374673 IFT57Q9NWB7 429 aa19.61■□□□□ 0.73
HSPG2-201ENST00000374673 TSPYL4Q9UJ04 414 aa19.61■□□□□ 0.73
HSPG2-201ENST00000374673 C4BP0C0L5 1744 aa19.61■□□□□ 0.73
HSPG2-201ENST00000374673 HEG1Q9ULI3 1381 aa19.6■□□□□ 0.73
HSPG2-201ENST00000374673 IL16Q14005 1332 aa19.6■□□□□ 0.73
HSPG2-201ENST00000374673 KCNQ4P56696 695 aa19.6■□□□□ 0.73
HSPG2-201ENST00000374673 GNAI1P63096 354 aa19.6■□□□□ 0.73
HSPG2-201ENST00000374673 ZNF496Q96IT1 587 aaPredicted RBP19.6■□□□□ 0.73
HSPG2-201ENST00000374673 FMNL2Q96PY5 1086 aa19.6■□□□□ 0.73
HSPG2-201ENST00000374673 LAMB4A4D0S4 1761 aa19.6■□□□□ 0.73
HSPG2-201ENST00000374673 ITPK1Q13572 414 aa19.59■□□□□ 0.73
HSPG2-201ENST00000374673 EIF4A1P60842 406 aaKnown RBP19.58■□□□□ 0.72
HSPG2-201ENST00000374673 LAS1LQ9Y4W2 734 aaKnown RBP19.58■□□□□ 0.72
HSPG2-201ENST00000374673 QSER1Q2KHR3 1735 aa19.58■□□□□ 0.72
HSPG2-201ENST00000374673 TUBGCP6Q96RT7 1819 aa19.57■□□□□ 0.72
HSPG2-201ENST00000374673 LINC00116Q8NCU8 138 aa19.56■□□□□ 0.72
HSPG2-201ENST00000374673 MBIPQ9NS73 344 aa19.56■□□□□ 0.72
HSPG2-201ENST00000374673 UBR3Q6ZT12 1888 aa19.56■□□□□ 0.72
HSPG2-201ENST00000374673 MYH14Q7Z406 1995 aaKnown RBP19.55■□□□□ 0.72
HSPG2-201ENST00000374673 NBPF14Q5TI25 921 aa19.55■□□□□ 0.72
HSPG2-201ENST00000374673 DNAJC10Q8IXB1 793 aa19.55■□□□□ 0.72
HSPG2-201ENST00000374673 ANO8Q9HCE9 1232 aaPredicted RBP19.55■□□□□ 0.72
HSPG2-201ENST00000374673 CNTNAP4Q9C0A0 1308 aa19.54■□□□□ 0.72
HSPG2-201ENST00000374673 SNRPA1P09661 255 aaKnown RBP19.54■□□□□ 0.72
HSPG2-201ENST00000374673 AKT1S1Q96B36 256 aa19.54■□□□□ 0.72
HSPG2-201ENST00000374673 TEX13AQ9BXU3 409 aaPredicted RBP19.54■□□□□ 0.72
HSPG2-201ENST00000374673 HNRNPUQ00839 825 aaKnown RBP eCLIP19.53■□□□□ 0.72
HSPG2-201ENST00000374673 SLC15A2Q16348 729 aa19.53■□□□□ 0.72
HSPG2-201ENST00000374673 ZNF827Q17R98 1081 aa19.53■□□□□ 0.72
HSPG2-201ENST00000374673 STK32BQ9NY57 414 aa19.53■□□□□ 0.72
HSPG2-201ENST00000374673 GIGYF1O75420 1035 aaPredicted RBP19.52■□□□□ 0.72
HSPG2-201ENST00000374673 CYP19A1P11511 503 aaPredicted RBP19.52■□□□□ 0.72
HSPG2-201ENST00000374673 RC3H1Q5TC82 1133 aaKnown RBP19.52■□□□□ 0.72
HSPG2-201ENST00000374673 PRAMEF22A3QJZ6 481 aa19.51■□□□□ 0.71
HSPG2-201ENST00000374673 GOLGA2Q08379 1002 aa19.51■□□□□ 0.71
HSPG2-201ENST00000374673 SPINK5Q9NQ38 1064 aaPredicted RBP19.51■□□□□ 0.71
HSPG2-201ENST00000374673 STARD3NLO95772 234 aa19.5■□□□□ 0.71
HSPG2-201ENST00000374673 CRKLP46109 303 aaKnown RBP19.5■□□□□ 0.71
HSPG2-201ENST00000374673 TSR2Q969E8 191 aaKnown RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms