RNA–Protein interactions for RNA: ENST00000374602.2

TCEA3-202, Transcript of transcription elongation factor A3, humanhuman

TSL 3

Gene TCEA3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-202ENST00000374602 TMF1P82094 1093 aa8.96□□□□□ -0.98
TCEA3-202ENST00000374602 CDCA8Q53HL2 280 aa8.96□□□□□ -0.98
TCEA3-202ENST00000374602 ZNF831Q5JPB2 1677 aa8.95□□□□□ -0.98
TCEA3-202ENST00000374602 WDR90Q96KV7 1748 aa8.95□□□□□ -0.98
TCEA3-202ENST00000374602 ST20-MTHFSA0A0A6YYL1 179 aa8.95□□□□□ -0.98
TCEA3-202ENST00000374602 NBPF6Q5VWK0 638 aa8.95□□□□□ -0.98
TCEA3-202ENST00000374602 NBPF4Q96M43 638 aa8.95□□□□□ -0.98
TCEA3-202ENST00000374602 SPINK5Q9NQ38 1064 aaPredicted RBP8.95□□□□□ -0.98
TCEA3-202ENST00000374602 SPG7Q9UQ90 795 aa8.95□□□□□ -0.98
TCEA3-202ENST00000374602 COL5A3P25940 1745 aaPredicted RBP8.94□□□□□ -0.98
TCEA3-202ENST00000374602 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.94□□□□□ -0.98
TCEA3-202ENST00000374602 APLP1P51693 650 aa8.94□□□□□ -0.98
TCEA3-202ENST00000374602 GGNBP2Q9H3C7 697 aa8.94□□□□□ -0.98
TCEA3-202ENST00000374602 TMOD3Q9NYL9 352 aa8.94□□□□□ -0.98
TCEA3-202ENST00000374602 PLEKHG2Q9H7P9 1386 aa8.94□□□□□ -0.98
TCEA3-202ENST00000374602 TNRC6CQ9HCJ0 1690 aaKnown RBP8.94□□□□□ -0.98
TCEA3-202ENST00000374602 C4AP0C0L4 1744 aa8.94□□□□□ -0.98
TCEA3-202ENST00000374602 LOC102724428A0A0B4J2F2 783 aa8.93□□□□□ -0.98
TCEA3-202ENST00000374602 GNPATO15228 680 aa8.93□□□□□ -0.98
TCEA3-202ENST00000374602 SIK1P57059 783 aa8.93□□□□□ -0.98
TCEA3-202ENST00000374602 TESK2Q96S53 571 aa8.93□□□□□ -0.98
TCEA3-202ENST00000374602 WWC3Q9ULE0 1092 aa8.93□□□□□ -0.98
TCEA3-202ENST00000374602 KIAA1551Q9HCM1 1747 aa8.93□□□□□ -0.98
TCEA3-202ENST00000374602 NCAPD2Q15021 1401 aa8.92□□□□□ -0.98
TCEA3-202ENST00000374602 WASHC2AQ641Q2 1341 aa8.92□□□□□ -0.98
TCEA3-202ENST00000374602 HSP90AB2PQ58FF8 381 aa8.92□□□□□ -0.98
TCEA3-202ENST00000374602 C16orf71Q8IYS4 520 aaPredicted RBP8.92□□□□□ -0.98
TCEA3-202ENST00000374602 PXDNLA1KZ92 1463 aa8.91□□□□□ -0.98
TCEA3-202ENST00000374602 C10orf71Q711Q0 1435 aa8.91□□□□□ -0.98
TCEA3-202ENST00000374602 KIF7Q2M1P5 1343 aa8.91□□□□□ -0.98
TCEA3-202ENST00000374602 FYB1O15117 783 aa8.91□□□□□ -0.98
TCEA3-202ENST00000374602 PPM1GO15355 546 aaPredicted RBP8.91□□□□□ -0.98
TCEA3-202ENST00000374602 CYP27B1O15528 508 aa8.91□□□□□ -0.98
TCEA3-202ENST00000374602 MMP10P09238 476 aa8.91□□□□□ -0.98
TCEA3-202ENST00000374602 FBLN1P23142 703 aa8.91□□□□□ -0.98
TCEA3-202ENST00000374602 CCDC87Q9NVE4 849 aa8.91□□□□□ -0.98
TCEA3-202ENST00000374602 KIF3CO14782 793 aa8.9□□□□□ -0.98
TCEA3-202ENST00000374602 TOMM70O94826 608 aa8.9□□□□□ -0.98
TCEA3-202ENST00000374602 ATP6V1AP38606 617 aa8.9□□□□□ -0.98
TCEA3-202ENST00000374602 TGFB2P61812 414 aa8.9□□□□□ -0.98
TCEA3-202ENST00000374602 DDX10Q13206 875 aaKnown RBP8.9□□□□□ -0.98
TCEA3-202ENST00000374602 IFNL2Q8IZJ0 200 aa8.9□□□□□ -0.98
TCEA3-202ENST00000374602 PIGBQ92521 554 aa8.9□□□□□ -0.98
TCEA3-202ENST00000374602 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.9□□□□□ -0.984e-8■□□□□ 9.7
TCEA3-202ENST00000374602 BCS1LQ9Y276 419 aa8.9□□□□□ -0.98
TCEA3-202ENST00000374602 RTCBQ9Y3I0 505 aaKnown RBP8.9□□□□□ -0.98
TCEA3-202ENST00000374602 HSP90AB1P08238 724 aaKnown RBP8.89□□□□□ -0.99
TCEA3-202ENST00000374602 NKX1-1Q15270 411 aaPredicted RBP8.89□□□□□ -0.99
TCEA3-202ENST00000374602 NLGN1Q8N2Q7 840 aa8.89□□□□□ -0.99
TCEA3-202ENST00000374602 LINC00116Q8NCU8 138 aa8.89□□□□□ -0.99
TCEA3-202ENST00000374602 PARP3Q9Y6F1 533 aa8.89□□□□□ -0.99
TCEA3-202ENST00000374602 VIRMAQ69YN4 1812 aaKnown RBP8.89□□□□□ -0.99
TCEA3-202ENST00000374602 KDM2BQ8NHM5 1336 aa8.88□□□□□ -0.99
TCEA3-202ENST00000374602 FCHSD2O94868 740 aa8.88□□□□□ -0.99
TCEA3-202ENST00000374602 TRAPPC3LQ5T215 181 aa8.88□□□□□ -0.99
TCEA3-202ENST00000374602 POLR3GLQ9BT43 218 aa8.88□□□□□ -0.99
TCEA3-202ENST00000374602 EMILIN1Q9Y6C2 1016 aa8.88□□□□□ -0.99
TCEA3-202ENST00000374602 MYH14Q7Z406 1995 aaKnown RBP8.88□□□□□ -0.99
TCEA3-202ENST00000374602 SBF1O95248 1867 aa8.87□□□□□ -0.99
TCEA3-202ENST00000374602 KDRP35968 1356 aa8.87□□□□□ -0.99
TCEA3-202ENST00000374602 PHKG2P15735 406 aa8.87□□□□□ -0.99
TCEA3-202ENST00000374602 RFC4P35249 363 aa8.87□□□□□ -0.99
TCEA3-202ENST00000374602 ARHGAP27Q6ZUM4 889 aa8.87□□□□□ -0.99
TCEA3-202ENST00000374602 TIAM2Q8IVF5 1701 aa8.87□□□□□ -0.99
TCEA3-202ENST00000374602 DLEC1Q9Y238 1755 aa8.86□□□□□ -0.99
TCEA3-202ENST00000374602 CNTNAP4Q9C0A0 1308 aa8.86□□□□□ -0.99
TCEA3-202ENST00000374602 CCDC88AQ3V6T2 1871 aa8.86□□□□□ -0.99
TCEA3-202ENST00000374602 POLA2Q14181 598 aa8.86□□□□□ -0.99
TCEA3-202ENST00000374602 AMIGO3Q86WK7 504 aa8.86□□□□□ -0.99
TCEA3-202ENST00000374602 RBM46Q8TBY0 533 aaKnown RBP8.86□□□□□ -0.99
TCEA3-202ENST00000374602 RBM42Q9BTD8 480 aaKnown RBP8.86□□□□□ -0.99
TCEA3-202ENST00000374602 ASAP1Q9ULH1 1129 aa8.86□□□□□ -0.99
TCEA3-202ENST00000374602 SCN11AQ9UI33 1791 aa8.86□□□□□ -0.99
TCEA3-202ENST00000374602 FSTL1Q12841 308 aa8.85□□□□□ -0.99
TCEA3-202ENST00000374602 ITPK1Q13572 414 aa8.85□□□□□ -0.99
TCEA3-202ENST00000374602 EYA1Q99502 592 aa8.85□□□□□ -0.99
TCEA3-202ENST00000374602 TJP1Q07157 1748 aa8.85□□□□□ -0.99
TCEA3-202ENST00000374602 ZC3H4Q9UPT8 1303 aaKnown RBP8.84□□□□□ -0.99
TCEA3-202ENST00000374602 A0A0G2JLW4 131 aa8.84□□□□□ -0.99
TCEA3-202ENST00000374602 ERVV-2B6SEH9 535 aa8.84□□□□□ -0.99
TCEA3-202ENST00000374602 ANP32CO43423 234 aa8.84□□□□□ -0.99
TCEA3-202ENST00000374602 CACNB1Q02641 598 aaPredicted RBP8.84□□□□□ -0.99
TCEA3-202ENST00000374602 DALRD3Q5D0E6 543 aaKnown RBP8.84□□□□□ -0.99
TCEA3-202ENST00000374602 C1orf141Q5JVX7 400 aa8.84□□□□□ -0.99
TCEA3-202ENST00000374602 RC3H1Q5TC82 1133 aaKnown RBP8.84□□□□□ -0.99
TCEA3-202ENST00000374602 C9orf131Q5VYM1 1079 aa8.84□□□□□ -0.99
TCEA3-202ENST00000374602 SMIM5Q71RC9 77 aa8.84□□□□□ -0.99
TCEA3-202ENST00000374602 DCAF5Q96JK2 942 aa8.84□□□□□ -0.99
TCEA3-202ENST00000374602 NMRK2Q9NPI5 230 aa8.84□□□□□ -0.99
TCEA3-202ENST00000374602 ATG3Q9NT62 314 aa8.84□□□□□ -0.99
TCEA3-202ENST00000374602 PIM2Q9P1W9 311 aa8.84□□□□□ -0.99
TCEA3-202ENST00000374602 AFDNP55196 1824 aaKnown RBP8.84□□□□□ -0.99
TCEA3-202ENST00000374602 KCPQ6ZWJ8 1503 aa8.84□□□□□ -0.99
TCEA3-202ENST00000374602 DPEP1P16444 411 aa8.83□□□□□ -1
TCEA3-202ENST00000374602 CABP4P57796 275 aa8.83□□□□□ -1
TCEA3-202ENST00000374602 AMOTQ4VCS5 1084 aa8.83□□□□□ -1
TCEA3-202ENST00000374602 PLEKHO1Q53GL0 409 aaPredicted RBP8.83□□□□□ -1
TCEA3-202ENST00000374602 KLRG1Q96E93 195 aa8.83□□□□□ -1
TCEA3-202ENST00000374602 RNF181Q9P0P0 153 aa8.83□□□□□ -1
TCEA3-202ENST00000374602 RPS6KA4O75676 772 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms