RNA–Protein interactions for RNA: ENST00000374601.7

TCEA3-201, Transcript of transcription elongation factor A3, humanhuman

TSL 1 (best) BASIC

Gene TCEA3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-201ENST00000374601 SLFN5Q08AF3 891 aa18.32■□□□□ 0.52
TCEA3-201ENST00000374601 SLC52A2Q9HAB3 445 aa18.32■□□□□ 0.52
TCEA3-201ENST00000374601 IFT57Q9NWB7 429 aa18.32■□□□□ 0.52
TCEA3-201ENST00000374601 ERVV-2B6SEH9 535 aa18.31■□□□□ 0.52
TCEA3-201ENST00000374601 TEFQ10587 303 aa18.31■□□□□ 0.52
TCEA3-201ENST00000374601 FAM182BQ5T319 152 aa18.31■□□□□ 0.52
TCEA3-201ENST00000374601 TRMT2AQ8IZ69 625 aaKnown RBP18.31■□□□□ 0.52
TCEA3-201ENST00000374601 C5P01031 1676 aa18.31■□□□□ 0.52
TCEA3-201ENST00000374601 FANCIQ9NVI1 1328 aa18.3■□□□□ 0.52
TCEA3-201ENST00000374601 E9PSI1 815 aa18.3■□□□□ 0.52
TCEA3-201ENST00000374601 KRT27Q7Z3Y8 459 aa18.3■□□□□ 0.52
TCEA3-201ENST00000374601 CFAP44Q96MT7 982 aa18.3■□□□□ 0.52
TCEA3-201ENST00000374601 CHL1O00533 1208 aa18.29■□□□□ 0.52
TCEA3-201ENST00000374601 GNAI1P63096 354 aa18.29■□□□□ 0.52
TCEA3-201ENST00000374601 TSR2Q969E8 191 aaKnown RBP18.29■□□□□ 0.52
TCEA3-201ENST00000374601 MBIPQ9NS73 344 aa18.29■□□□□ 0.52
TCEA3-201ENST00000374601 LAS1LQ9Y4W2 734 aaKnown RBP18.29■□□□□ 0.52
TCEA3-201ENST00000374601 TNS1Q9HBL0 1735 aaKnown RBP18.29■□□□□ 0.52
TCEA3-201ENST00000374601 LAMB4A4D0S4 1761 aa18.28■□□□□ 0.52
TCEA3-201ENST00000374601 CABP4P57796 275 aa18.28■□□□□ 0.52
TCEA3-201ENST00000374601 TAF7Q15545 349 aaPredicted RBP18.28■□□□□ 0.52
TCEA3-201ENST00000374601 DUSP27Q5VZP5 1158 aa18.28■□□□□ 0.52
TCEA3-201ENST00000374601 NFATC2IPQ8NCF5 419 aa18.28■□□□□ 0.52
TCEA3-201ENST00000374601 MIS18AQ9NYP9 233 aa18.28■□□□□ 0.52
TCEA3-201ENST00000374601 KCPQ6ZWJ8 1503 aa18.28■□□□□ 0.52
TCEA3-201ENST00000374601 MYH16Q9H6N6 1097 aa18.27■□□□□ 0.52
TCEA3-201ENST00000374601 LY75O60449 1722 aa18.26■□□□□ 0.51
TCEA3-201ENST00000374601 PRIM1P49642 420 aaKnown RBP18.26■□□□□ 0.51
TCEA3-201ENST00000374601 ACSBG1Q96GR2 724 aa18.26■□□□□ 0.51
TCEA3-201ENST00000374601 BABAM1Q9NWV8 329 aa18.26■□□□□ 0.51
TCEA3-201ENST00000374601 TMOD3Q9NYL9 352 aa18.26■□□□□ 0.51
TCEA3-201ENST00000374601 TSPYL4Q9UJ04 414 aa18.26■□□□□ 0.51
TCEA3-201ENST00000374601 CICQ96RK0 1608 aaPredicted RBP18.25■□□□□ 0.51
TCEA3-201ENST00000374601 PIGBQ92521 554 aa18.25■□□□□ 0.51
TCEA3-201ENST00000374601 TJP1Q07157 1748 aa18.25■□□□□ 0.51
TCEA3-201ENST00000374601 BTBD11A6QL63 1104 aa18.24■□□□□ 0.51
TCEA3-201ENST00000374601 KCNQ3O43525 872 aa18.24■□□□□ 0.51
TCEA3-201ENST00000374601 KCNQ2O43526 872 aa18.24■□□□□ 0.51
TCEA3-201ENST00000374601 ZNF831Q5JPB2 1677 aa18.24■□□□□ 0.51
TCEA3-201ENST00000374601 SLC39A6Q13433 755 aa18.23■□□□□ 0.51
TCEA3-201ENST00000374601 FAM196AQ6ZSG2 479 aa18.23■□□□□ 0.51
TCEA3-201ENST00000374601 PTF1AQ7RTS3 328 aa18.23■□□□□ 0.51
TCEA3-201ENST00000374601 SYTL4Q96C24 671 aaPredicted RBP18.23■□□□□ 0.51
TCEA3-201ENST00000374601 HEG1Q9ULI3 1381 aa18.21■□□□□ 0.51
TCEA3-201ENST00000374601 EXOSC9Q06265 439 aaKnown RBP18.21■□□□□ 0.51
TCEA3-201ENST00000374601 KRT24Q2M2I5 525 aa18.21■□□□□ 0.51
TCEA3-201ENST00000374601 ZNF790Q6PG37 636 aa18.21■□□□□ 0.51
TCEA3-201ENST00000374601 COL5A3P25940 1745 aaPredicted RBP18.2■□□□□ 0.5
TCEA3-201ENST00000374601 RGPD3A6NKT7 1758 aaPredicted RBP18.2■□□□□ 0.5
TCEA3-201ENST00000374601 RGPD4Q7Z3J3 1758 aa18.2■□□□□ 0.5
TCEA3-201ENST00000374601 ATG3Q9NT62 314 aa18.2■□□□□ 0.5
TCEA3-201ENST00000374601 ASAP1Q9ULH1 1129 aa18.2■□□□□ 0.5
TCEA3-201ENST00000374601 TAF1LQ8IZX4 1826 aa18.2■□□□□ 0.5
TCEA3-201ENST00000374601 CACNA1FO60840 1977 aa18.2■□□□□ 0.5
TCEA3-201ENST00000374601 EIF4A1P60842 406 aaKnown RBP18.19■□□□□ 0.5
TCEA3-201ENST00000374601 C8orf58Q8NAV2 365 aa18.19■□□□□ 0.5
TCEA3-201ENST00000374601 EP400Q96L91 3159 aa18.18■□□□□ 0.5
TCEA3-201ENST00000374601 TSPYL6Q8N831 410 aa18.18■□□□□ 0.5
TCEA3-201ENST00000374601 ZNF496Q96IT1 587 aaPredicted RBP18.18■□□□□ 0.5
TCEA3-201ENST00000374601 TTC5Q8N0Z6 440 aa18.17■□□□□ 0.5
TCEA3-201ENST00000374601 BCL11BQ9C0K0 894 aaPredicted RBP18.16■□□□□ 0.5
TCEA3-201ENST00000374601 PALLDQ8WX93 1383 aa18.16■□□□□ 0.5
TCEA3-201ENST00000374601 RREB1Q92766 1687 aa18.15■□□□□ 0.5
TCEA3-201ENST00000374601 TRIM37O94972 964 aa18.15■□□□□ 0.5
TCEA3-201ENST00000374601 TWISTNBQ3B726 338 aaPredicted RBP18.14■□□□□ 0.49
TCEA3-201ENST00000374601 FMNL2Q96PY5 1086 aa18.14■□□□□ 0.49
TCEA3-201ENST00000374601 PRAMEF22A3QJZ6 481 aa18.13■□□□□ 0.49
TCEA3-201ENST00000374601 ELL2O00472 640 aaPredicted RBP18.13■□□□□ 0.49
TCEA3-201ENST00000374601 PTCD1O75127 700 aaKnown RBP18.13■□□□□ 0.49
TCEA3-201ENST00000374601 VAMP4O75379 141 aa18.13■□□□□ 0.49
TCEA3-201ENST00000374601 GIGYF1O75420 1035 aaPredicted RBP18.13■□□□□ 0.49
TCEA3-201ENST00000374601 SLC4A9Q96Q91 983 aa18.13■□□□□ 0.49
TCEA3-201ENST00000374601 MYH14Q7Z406 1995 aaKnown RBP18.13■□□□□ 0.49
TCEA3-201ENST00000374601 CENPBP07199 599 aaPredicted RBP18.12■□□□□ 0.49
TCEA3-201ENST00000374601 CT47B1P0C2W7 299 aaPredicted RBP18.12■□□□□ 0.49
TCEA3-201ENST00000374601 SMARCC1Q92922 1105 aaPredicted RBP18.12■□□□□ 0.49
TCEA3-201ENST00000374601 SOS1Q07889 1333 aaPredicted RBP18.12■□□□□ 0.49
TCEA3-201ENST00000374601 HOXB7P09629 217 aa18.11■□□□□ 0.49
TCEA3-201ENST00000374601 SNRPA1P09661 255 aaKnown RBP18.09■□□□□ 0.49
TCEA3-201ENST00000374601 VSIG10Q8N0Z9 540 aa18.09■□□□□ 0.49
TCEA3-201ENST00000374601 RBM42Q9BTD8 480 aaKnown RBP18.09■□□□□ 0.49
TCEA3-201ENST00000374601 LOC102724428A0A0B4J2F2 783 aa18.08■□□□□ 0.48
TCEA3-201ENST00000374601 SIK1P57059 783 aa18.08■□□□□ 0.48
TCEA3-201ENST00000374601 RCAN3Q9UKA8 241 aa18.08■□□□□ 0.48
TCEA3-201ENST00000374601 C4BP0C0L5 1744 aa18.08■□□□□ 0.48
TCEA3-201ENST00000374601 RARSP54136 660 aaKnown RBP18.07■□□□□ 0.48
TCEA3-201ENST00000374601 DNAJC10Q8IXB1 793 aa18.07■□□□□ 0.48
TCEA3-201ENST00000374601 NUP188Q5SRE5 1749 aa18.06■□□□□ 0.48
TCEA3-201ENST00000374601 TCERG1O14776 1098 aaKnown RBP18.06■□□□□ 0.48
TCEA3-201ENST00000374601 ITPK1Q13572 414 aa18.06■□□□□ 0.48
TCEA3-201ENST00000374601 HDGFL1Q5TGJ6 251 aa18.06■□□□□ 0.48
TCEA3-201ENST00000374601 SSH1Q8WYL5 1049 aa18.06■□□□□ 0.48
TCEA3-201ENST00000374601 ZNF428Q96B54 188 aa18.06■□□□□ 0.48
TCEA3-201ENST00000374601 USP16Q9Y5T5 823 aa18.06■□□□□ 0.48
TCEA3-201ENST00000374601 TUBGCP6Q96RT7 1819 aa18.06■□□□□ 0.48
TCEA3-201ENST00000374601 NECTIN2Q92692 538 aa18.05■□□□□ 0.48
TCEA3-201ENST00000374601 UBR3Q6ZT12 1888 aa18.05■□□□□ 0.48
TCEA3-201ENST00000374601 N4BP2Q86UW6 1770 aaPredicted RBP18.04■□□□□ 0.48
TCEA3-201ENST00000374601 APBA3O96018 575 aa18.04■□□□□ 0.48
TCEA3-201ENST00000374601 EIF2S2P20042 333 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms