RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 NDUFB9Q9Y6M9 179 aa13.3□□□□□ -0.28
CXCL12-203ENST00000374429 PPFIA3O75145 1194 aa13.29□□□□□ -0.28
CXCL12-203ENST00000374429 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.29□□□□□ -0.28
CXCL12-203ENST00000374429 CDC45O75419 566 aa13.29□□□□□ -0.28
CXCL12-203ENST00000374429 PPP1R42Q7Z4L9 355 aa13.29□□□□□ -0.28
CXCL12-203ENST00000374429 NEK4P51957 841 aa13.28□□□□□ -0.28
CXCL12-203ENST00000374429 CPSF1Q10570 1443 aaKnown RBP13.28□□□□□ -0.28
CXCL12-203ENST00000374429 NAP1L2Q9ULW6 460 aaPredicted RBP13.28□□□□□ -0.28
CXCL12-203ENST00000374429 IQSEC2Q5JU85 1478 aa13.28□□□□□ -0.28
CXCL12-203ENST00000374429 EVA1CP58658 441 aa13.28□□□□□ -0.28
CXCL12-203ENST00000374429 PLEKHO1Q53GL0 409 aaPredicted RBP13.28□□□□□ -0.28
CXCL12-203ENST00000374429 SRCIN1Q9C0H9 1055 aa13.28□□□□□ -0.28
CXCL12-203ENST00000374429 AAMPQ13685 434 aa13.27□□□□□ -0.28
CXCL12-203ENST00000374429 TOM1L2Q6ZVM7 507 aa13.27□□□□□ -0.28
CXCL12-203ENST00000374429 NLRP1Q9C000 1473 aa13.27□□□□□ -0.28
CXCL12-203ENST00000374429 MAP2P11137 1827 aaKnown RBP13.27□□□□□ -0.28
CXCL12-203ENST00000374429 MAP3K2Q9Y2U5 619 aa13.27□□□□□ -0.28
CXCL12-203ENST00000374429 CWC27Q6UX04 472 aaKnown RBP13.27□□□□□ -0.29
CXCL12-203ENST00000374429 NAP1L5Q96NT1 182 aaPredicted RBP13.27□□□□□ -0.29
CXCL12-203ENST00000374429 CCDC8Q9H0W5 538 aaPredicted RBP13.27□□□□□ -0.29
CXCL12-203ENST00000374429 LRRCC1Q9C099 1032 aa13.26□□□□□ -0.29
CXCL12-203ENST00000374429 PRDM11Q9NQV5 511 aa13.26□□□□□ -0.29
CXCL12-203ENST00000374429 SPG7Q9UQ90 795 aa13.26□□□□□ -0.29
CXCL12-203ENST00000374429 PLEKHG1Q9ULL1 1385 aa13.26□□□□□ -0.29
CXCL12-203ENST00000374429 KIAA1210Q9ULL0 1709 aa13.26□□□□□ -0.29
CXCL12-203ENST00000374429 ATP7BP35670 1465 aa13.26□□□□□ -0.29
CXCL12-203ENST00000374429 CPA1P15085 419 aa13.26□□□□□ -0.29
CXCL12-203ENST00000374429 ANKRD44Q8N8A2 993 aa13.26□□□□□ -0.29
CXCL12-203ENST00000374429 UNC5CLQ8IV45 518 aa13.25□□□□□ -0.29
CXCL12-203ENST00000374429 TTC5Q8N0Z6 440 aa13.25□□□□□ -0.29
CXCL12-203ENST00000374429 DCTPP1Q9H773 170 aa13.25□□□□□ -0.29
CXCL12-203ENST00000374429 SSFA2P28290 1259 aa13.25□□□□□ -0.29
CXCL12-203ENST00000374429 MPNDQ8N594 471 aa13.25□□□□□ -0.29
CXCL12-203ENST00000374429 TTC21AQ8NDW8 1320 aa13.24□□□□□ -0.29
CXCL12-203ENST00000374429 ABCC4O15439 1325 aa13.24□□□□□ -0.29
CXCL12-203ENST00000374429 CCT4P50991 539 aaKnown RBP13.24□□□□□ -0.29
CXCL12-203ENST00000374429 MCTP1Q6DN14 999 aa13.24□□□□□ -0.29
CXCL12-203ENST00000374429 IP6K1Q92551 441 aa13.24□□□□□ -0.29
CXCL12-203ENST00000374429 TCEANC2Q96MN5 208 aa13.24□□□□□ -0.29
CXCL12-203ENST00000374429 FOSBP53539 338 aa13.23□□□□□ -0.29
CXCL12-203ENST00000374429 PKP1Q13835 747 aa13.23□□□□□ -0.29
CXCL12-203ENST00000374429 BMP2KLQ5H9B9 411 aa13.23□□□□□ -0.29
CXCL12-203ENST00000374429 ZGPATQ8N5A5 531 aaKnown RBP13.23□□□□□ -0.29
CXCL12-203ENST00000374429 ARHGAP45Q92619 1136 aa13.23□□□□□ -0.29
CXCL12-203ENST00000374429 SBNO1A3KN83 1393 aa13.23□□□□□ -0.29
CXCL12-203ENST00000374429 TTC22Q5TAA0 569 aa13.23□□□□□ -0.29
CXCL12-203ENST00000374429 INTS3Q68E01 1043 aaKnown RBP13.23□□□□□ -0.29
CXCL12-203ENST00000374429 RPAP2Q8IXW5 612 aaPredicted RBP13.23□□□□□ -0.29
CXCL12-203ENST00000374429 IFT172Q9UG01 1749 aa13.23□□□□□ -0.29
CXCL12-203ENST00000374429 SHPRHQ149N8 1683 aa13.23□□□□□ -0.29
CXCL12-203ENST00000374429 USP44Q9H0E7 712 aa13.23□□□□□ -0.29
CXCL12-203ENST00000374429 COL3A1P02461 1466 aaPredicted RBP13.23□□□□□ -0.29
CXCL12-203ENST00000374429 GNAI3P08754 354 aa13.22□□□□□ -0.29
CXCL12-203ENST00000374429 PDE1AP54750 535 aa13.22□□□□□ -0.29
CXCL12-203ENST00000374429 MYD88Q99836 296 aa13.22□□□□□ -0.29
CXCL12-203ENST00000374429 CHMP5Q9NZZ3 219 aa13.22□□□□□ -0.29
CXCL12-203ENST00000374429 MX1P20591 662 aa13.22□□□□□ -0.29
CXCL12-203ENST00000374429 DNAAF4Q8WXU2 420 aa13.22□□□□□ -0.29
CXCL12-203ENST00000374429 ZBTB3Q9H5J0 574 aa13.22□□□□□ -0.29
CXCL12-203ENST00000374429 TRAK2O60296 914 aa13.22□□□□□ -0.29
CXCL12-203ENST00000374429 KDM4AO75164 1064 aa13.22□□□□□ -0.29
CXCL12-203ENST00000374429 NEUROD6Q96NK8 337 aa13.22□□□□□ -0.29
CXCL12-203ENST00000374429 GDPD2Q9HCC8 539 aa13.22□□□□□ -0.29
CXCL12-203ENST00000374429 SRCAPQ6ZRS2 3230 aa13.21□□□□□ -0.29
CXCL12-203ENST00000374429 PLCB2Q00722 1185 aa13.21□□□□□ -0.29
CXCL12-203ENST00000374429 BOLA2Q9H3K6 86 aa13.21□□□□□ -0.29
CXCL12-203ENST00000374429 NUTM2BA6NNL0 878 aaPredicted RBP13.21□□□□□ -0.29
CXCL12-203ENST00000374429 NUTM2EB1AL46 878 aaPredicted RBP13.21□□□□□ -0.29
CXCL12-203ENST00000374429 COPS6Q7L5N1 327 aa13.21□□□□□ -0.29
CXCL12-203ENST00000374429 NUTM2AQ8IVF1 878 aaPredicted RBP13.21□□□□□ -0.29
CXCL12-203ENST00000374429 EDC3Q96F86 508 aaKnown RBP13.21□□□□□ -0.29
CXCL12-203ENST00000374429 PANK2Q9BZ23 570 aa13.21□□□□□ -0.29
CXCL12-203ENST00000374429 IFIT2P09913 472 aaKnown RBP13.21□□□□□ -0.3
CXCL12-203ENST00000374429 USP16Q9Y5T5 823 aa13.21□□□□□ -0.3
CXCL12-203ENST00000374429 RTL1A6NKG5 1358 aa13.2□□□□□ -0.3
CXCL12-203ENST00000374429 TATP17735 454 aaPredicted RBP13.2□□□□□ -0.3
CXCL12-203ENST00000374429 CABP4P57796 275 aa13.2□□□□□ -0.3
CXCL12-203ENST00000374429 KCNH5Q8NCM2 988 aa13.2□□□□□ -0.3
CXCL12-203ENST00000374429 IGSF1Q8N6C5 1336 aa13.2□□□□□ -0.3
CXCL12-203ENST00000374429 AATKQ6ZMQ8 1374 aa13.2□□□□□ -0.3
CXCL12-203ENST00000374429 ADAMTS2O95450 1211 aa13.2□□□□□ -0.3
CXCL12-203ENST00000374429 MCM4P33991 863 aa13.2□□□□□ -0.3
CXCL12-203ENST00000374429 TNPO1Q92973 898 aaKnown RBP13.2□□□□□ -0.3
CXCL12-203ENST00000374429 MAP3K5Q99683 1374 aa13.2□□□□□ -0.3
CXCL12-203ENST00000374429 KIAA1211Q6ZU35 1233 aa13.19□□□□□ -0.3
CXCL12-203ENST00000374429 AACSQ86V21 672 aa13.19□□□□□ -0.3
CXCL12-203ENST00000374429 XAGE3Q8WTP9 111 aa13.19□□□□□ -0.3
CXCL12-203ENST00000374429 DNAJC2Q99543 621 aaKnown RBP13.19□□□□□ -0.3
CXCL12-203ENST00000374429 DDX49Q9Y6V7 483 aaKnown RBP13.19□□□□□ -0.3
CXCL12-203ENST00000374429 EIF4A1P60842 406 aaKnown RBP13.19□□□□□ -0.3
CXCL12-203ENST00000374429 PIK3R4Q99570 1358 aa13.19□□□□□ -0.3
CXCL12-203ENST00000374429 UBE3BQ7Z3V4 1068 aa13.19□□□□□ -0.3
CXCL12-203ENST00000374429 PTPRCP08575 1304 aa13.18□□□□□ -0.3
CXCL12-203ENST00000374429 SOS1Q07889 1333 aaPredicted RBP13.18□□□□□ -0.3
CXCL12-203ENST00000374429 K7ELQ4 463 aaPredicted RBP13.18□□□□□ -0.3
CXCL12-203ENST00000374429 RNMTO43148 476 aaKnown RBP13.18□□□□□ -0.3
CXCL12-203ENST00000374429 ZNF496Q96IT1 587 aaPredicted RBP13.18□□□□□ -0.3
CXCL12-203ENST00000374429 C19orf44Q9H6X5 657 aa13.18□□□□□ -0.3
CXCL12-203ENST00000374429 PIP4K2BP78356 416 aa13.18□□□□□ -0.3
CXCL12-203ENST00000374429 SIRT1Q96EB6 747 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms