RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 DCTPP1Q9H773 170 aa16.41■□□□□ 0.22
CLIC4-201ENST00000374379 ATP5J2-PTCD1G3V325 749 aa16.4■□□□□ 0.22
CLIC4-201ENST00000374379 PLEKHM2Q8IWE5 1019 aa16.4■□□□□ 0.22
CLIC4-201ENST00000374379 MYD88Q99836 296 aa16.4■□□□□ 0.22
CLIC4-201ENST00000374379 GTF2E1P29083 439 aaPredicted RBP16.4■□□□□ 0.22
CLIC4-201ENST00000374379 SYAP1Q96A49 352 aaPredicted RBP16.4■□□□□ 0.22
CLIC4-201ENST00000374379 BOLA2Q9H3K6 86 aa16.4■□□□□ 0.22
CLIC4-201ENST00000374379 DBF4Q9UBU7 674 aaPredicted RBP16.4■□□□□ 0.22
CLIC4-201ENST00000374379 KIDINS220Q9ULH0 1771 aa16.4■□□□□ 0.22
CLIC4-201ENST00000374379 GLI2P10070 1586 aa16.4■□□□□ 0.22
CLIC4-201ENST00000374379 INO80Q9ULG1 1556 aaPredicted RBP16.4■□□□□ 0.22
CLIC4-201ENST00000374379 TNPO1Q92973 898 aaKnown RBP16.39■□□□□ 0.21
CLIC4-201ENST00000374379 ADGRB3O60242 1522 aa16.39■□□□□ 0.21
CLIC4-201ENST00000374379 PDE1AP54750 535 aa16.38■□□□□ 0.21
CLIC4-201ENST00000374379 KIF1BPQ96EK5 621 aa16.38■□□□□ 0.21
CLIC4-201ENST00000374379 AMOTQ4VCS5 1084 aa16.38■□□□□ 0.21
CLIC4-201ENST00000374379 NBPF6Q5VWK0 638 aa16.38■□□□□ 0.21
CLIC4-201ENST00000374379 DRC7Q8IY82 874 aa16.38■□□□□ 0.21
CLIC4-201ENST00000374379 NBPF4Q96M43 638 aa16.38■□□□□ 0.21
CLIC4-201ENST00000374379 STK3Q13188 491 aa16.38■□□□□ 0.21
CLIC4-201ENST00000374379 GNL2Q13823 731 aaKnown RBP16.38■□□□□ 0.21
CLIC4-201ENST00000374379 CWF19L2Q2TBE0 894 aaKnown RBP16.38■□□□□ 0.21
CLIC4-201ENST00000374379 PA2G4Q9UQ80 394 aaKnown RBP16.38■□□□□ 0.21
CLIC4-201ENST00000374379 ARID3AQ99856 593 aa16.37■□□□□ 0.21
CLIC4-201ENST00000374379 POLR1AO95602 1720 aaPredicted RBP16.37■□□□□ 0.21
CLIC4-201ENST00000374379 H3BQV1 296 aa16.37■□□□□ 0.21
CLIC4-201ENST00000374379 APPP05067 770 aa16.37■□□□□ 0.21
CLIC4-201ENST00000374379 IFFO2Q5TF58 517 aa16.37■□□□□ 0.21
CLIC4-201ENST00000374379 FAM184AQ8NB25 1140 aa16.37■□□□□ 0.21
CLIC4-201ENST00000374379 KDM4AO75164 1064 aa16.36■□□□□ 0.21
CLIC4-201ENST00000374379 WASHC4Q2M389 1173 aa16.36■□□□□ 0.21
CLIC4-201ENST00000374379 MPNDQ8N594 471 aa16.36■□□□□ 0.21
CLIC4-201ENST00000374379 FIBPO43427 364 aa16.36■□□□□ 0.21
CLIC4-201ENST00000374379 KCNQ3O43525 872 aa16.36■□□□□ 0.21
CLIC4-201ENST00000374379 ARHGAP31Q2M1Z3 1444 aa16.36■□□□□ 0.21
CLIC4-201ENST00000374379 A2ML1A8K2U0 1454 aa16.35■□□□□ 0.21
CLIC4-201ENST00000374379 RNF20Q5VTR2 975 aa16.35■□□□□ 0.21
CLIC4-201ENST00000374379 IL17REQ8NFR9 667 aa16.35■□□□□ 0.21
CLIC4-201ENST00000374379 TULP4Q9NRJ4 1543 aa16.35■□□□□ 0.21
CLIC4-201ENST00000374379 DTNBO60941 627 aa16.35■□□□□ 0.21
CLIC4-201ENST00000374379 NFATC2IPQ8NCF5 419 aa16.35■□□□□ 0.21
CLIC4-201ENST00000374379 JAKMIP1Q96N16 626 aaKnown RBP16.35■□□□□ 0.21
CLIC4-201ENST00000374379 PNMA6EA0A0J9YXQ4 647 aa16.34■□□□□ 0.21
CLIC4-201ENST00000374379 PIK3R4Q99570 1358 aa16.34■□□□□ 0.21
CLIC4-201ENST00000374379 RHPN1Q8TCX5 695 aa16.34■□□□□ 0.21
CLIC4-201ENST00000374379 PHF23Q9BUL5 403 aaPredicted RBP16.34■□□□□ 0.21
CLIC4-201ENST00000374379 ZBTB3Q9H5J0 574 aa16.34■□□□□ 0.21
CLIC4-201ENST00000374379 SBNO1A3KN83 1393 aa16.34■□□□□ 0.21
CLIC4-201ENST00000374379 IP6K1Q92551 441 aa16.33■□□□□ 0.21
CLIC4-201ENST00000374379 UBE3BQ7Z3V4 1068 aa16.33■□□□□ 0.21
CLIC4-201ENST00000374379 QRICH2Q9H0J4 1663 aa16.33■□□□□ 0.2
CLIC4-201ENST00000374379 MAP3K5Q99683 1374 aa16.33■□□□□ 0.2
CLIC4-201ENST00000374379 MRE11P49959 708 aa16.33■□□□□ 0.2
CLIC4-201ENST00000374379 PRPF40BQ6NWY9 871 aaKnown RBP16.33■□□□□ 0.2
CLIC4-201ENST00000374379 ERC1Q8IUD2 1116 aa16.33■□□□□ 0.2
CLIC4-201ENST00000374379 GDPD2Q9HCC8 539 aa16.33■□□□□ 0.2
CLIC4-201ENST00000374379 USP19O94966 1318 aa16.33■□□□□ 0.2
CLIC4-201ENST00000374379 NASPP49321 788 aaPredicted RBP16.32■□□□□ 0.2
CLIC4-201ENST00000374379 NUTM2BA6NNL0 878 aaPredicted RBP16.32■□□□□ 0.2
CLIC4-201ENST00000374379 NUTM2EB1AL46 878 aaPredicted RBP16.32■□□□□ 0.2
CLIC4-201ENST00000374379 CASTP20810 708 aaKnown RBP16.32■□□□□ 0.2
CLIC4-201ENST00000374379 COPS6Q7L5N1 327 aa16.32■□□□□ 0.2
CLIC4-201ENST00000374379 NUTM2AQ8IVF1 878 aaPredicted RBP16.32■□□□□ 0.2
CLIC4-201ENST00000374379 ATP8B2P98198 1209 aa16.32■□□□□ 0.2
CLIC4-201ENST00000374379 A0A087WZG4 1122 aa16.31■□□□□ 0.2
CLIC4-201ENST00000374379 LARP1Q6PKG0 1096 aaKnown RBP16.31■□□□□ 0.2
CLIC4-201ENST00000374379 XAGE3Q8WTP9 111 aa16.31■□□□□ 0.2
CLIC4-201ENST00000374379 FKBP4Q02790 459 aaKnown RBP eCLIP16.31■□□□□ 0.2
CLIC4-201ENST00000374379 ALKQ9UM73 1620 aa16.31■□□□□ 0.2
CLIC4-201ENST00000374379 GLRX3O76003 335 aaKnown RBP16.31■□□□□ 0.2
CLIC4-201ENST00000374379 NBPF7P0C2Y1 421 aaPredicted RBP16.31■□□□□ 0.2
CLIC4-201ENST00000374379 AKAP4Q5JQC9 854 aa16.31■□□□□ 0.2
CLIC4-201ENST00000374379 SIRT2Q8IXJ6 389 aa16.3■□□□□ 0.2
CLIC4-201ENST00000374379 FBXW7Q969H0 707 aa16.3■□□□□ 0.2
CLIC4-201ENST00000374379 ATP6V1DQ9Y5K8 247 aa16.3■□□□□ 0.2
CLIC4-201ENST00000374379 CIZ1Q9ULV3 898 aaPredicted RBP16.3■□□□□ 0.2
CLIC4-201ENST00000374379 ABCC4O15439 1325 aa16.3■□□□□ 0.2
CLIC4-201ENST00000374379 FERMT3Q86UX7 667 aa16.3■□□□□ 0.2
CLIC4-201ENST00000374379 TCEANC2Q96MN5 208 aa16.3■□□□□ 0.2
CLIC4-201ENST00000374379 DIP2CQ9Y2E4 1556 aa16.29■□□□□ 0.2
CLIC4-201ENST00000374379 CEBPZQ03701 1054 aaKnown RBP16.29■□□□□ 0.2
CLIC4-201ENST00000374379 GRPEL1Q9HAV7 217 aa16.29■□□□□ 0.2
CLIC4-201ENST00000374379 CYP46A1Q9Y6A2 500 aa16.29■□□□□ 0.2
CLIC4-201ENST00000374379 SETD1BQ9UPS6 1966 aaKnown RBP16.29■□□□□ 0.2
CLIC4-201ENST00000374379 PPFIA3O75145 1194 aa16.29■□□□□ 0.2
CLIC4-201ENST00000374379 GSPT1P15170 499 aaKnown RBP16.29■□□□□ 0.2
CLIC4-201ENST00000374379 FAM135BQ49AJ0 1406 aa16.29■□□□□ 0.2
CLIC4-201ENST00000374379 IFNL2Q8IZJ0 200 aa16.29■□□□□ 0.2
CLIC4-201ENST00000374379 HYPKQ9NX55 129 aa16.29■□□□□ 0.2
CLIC4-201ENST00000374379 RAB11FIP3O75154 756 aa16.28■□□□□ 0.2
CLIC4-201ENST00000374379 MCM2P49736 904 aa16.28■□□□□ 0.2
CLIC4-201ENST00000374379 SF3A1Q15459 793 aaKnown RBP16.28■□□□□ 0.2
CLIC4-201ENST00000374379 ZGPATQ8N5A5 531 aaKnown RBP16.28■□□□□ 0.2
CLIC4-201ENST00000374379 SIRT1Q96EB6 747 aa16.28■□□□□ 0.2
CLIC4-201ENST00000374379 LAMC1P11047 1609 aa16.28■□□□□ 0.2
CLIC4-201ENST00000374379 CCDC83Q8IWF9 413 aa16.28■□□□□ 0.2
CLIC4-201ENST00000374379 STK11IPQ8N1F8 1099 aa16.28■□□□□ 0.2
CLIC4-201ENST00000374379 KLHDC4Q8TBB5 520 aa16.28■□□□□ 0.2
CLIC4-201ENST00000374379 LMTK2Q8IWU2 1503 aa16.28■□□□□ 0.2
CLIC4-201ENST00000374379 BICD2Q8TD16 824 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms