RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 TEFQ10587 303 aa19.85■□□□□ 0.77
CNKSR1-202ENST00000374253 PNMA6EA0A0J9YXQ4 647 aa19.85■□□□□ 0.77
CNKSR1-202ENST00000374253 GNAI2P04899 355 aa19.85■□□□□ 0.77
CNKSR1-202ENST00000374253 TTC22Q5TAA0 569 aa19.85■□□□□ 0.77
CNKSR1-202ENST00000374253 RBM42Q9BTD8 480 aaKnown RBP19.85■□□□□ 0.77
CNKSR1-202ENST00000374253 CDC45O75419 566 aa19.84■□□□□ 0.77
CNKSR1-202ENST00000374253 CHPF2Q9P2E5 772 aa19.84■□□□□ 0.77
CNKSR1-202ENST00000374253 CEMIPQ8WUJ3 1361 aa19.84■□□□□ 0.77
CNKSR1-202ENST00000374253 FAM208AQ9UK61 1670 aaKnown RBP19.84■□□□□ 0.77
CNKSR1-202ENST00000374253 BTBD11A6QL63 1104 aa19.83■□□□□ 0.77
CNKSR1-202ENST00000374253 RBM25P49756 843 aaKnown RBP19.83■□□□□ 0.77
CNKSR1-202ENST00000374253 EIF4A1P60842 406 aaKnown RBP19.83■□□□□ 0.77
CNKSR1-202ENST00000374253 CABLES1Q8TDN4 633 aa19.83■□□□□ 0.77
CNKSR1-202ENST00000374253 C19orf44Q9H6X5 657 aa19.83■□□□□ 0.77
CNKSR1-202ENST00000374253 LRRFIP2Q9Y608 721 aaKnown RBP19.83■□□□□ 0.77
CNKSR1-202ENST00000374253 PXDNQ92626 1479 aa19.83■□□□□ 0.77
CNKSR1-202ENST00000374253 HSPA2P54652 639 aa19.83■□□□□ 0.76
CNKSR1-202ENST00000374253 C1orf167Q5SNV9 1468 aa19.83■□□□□ 0.76
CNKSR1-202ENST00000374253 HMMRO75330 724 aa19.82■□□□□ 0.76
CNKSR1-202ENST00000374253 PLEKHO1Q53GL0 409 aaPredicted RBP19.82■□□□□ 0.76
CNKSR1-202ENST00000374253 HSCBQ8IWL3 235 aa19.82■□□□□ 0.76
CNKSR1-202ENST00000374253 KIF2CQ99661 725 aa19.82■□□□□ 0.76
CNKSR1-202ENST00000374253 PRAMEF22A3QJZ6 481 aa19.81■□□□□ 0.76
CNKSR1-202ENST00000374253 CD2BP2O95400 341 aaKnown RBP19.81■□□□□ 0.76
CNKSR1-202ENST00000374253 AKAP4Q5JQC9 854 aa19.81■□□□□ 0.76
CNKSR1-202ENST00000374253 C1orf141Q5JVX7 400 aa19.81■□□□□ 0.76
CNKSR1-202ENST00000374253 SDSP20132 328 aa19.81■□□□□ 0.76
CNKSR1-202ENST00000374253 FOXD4L1Q9NU39 408 aa19.81■□□□□ 0.76
CNKSR1-202ENST00000374253 ATF3P18847 181 aa19.8■□□□□ 0.76
CNKSR1-202ENST00000374253 USP44Q9H0E7 712 aa19.8■□□□□ 0.76
CNKSR1-202ENST00000374253 TMEM94Q12767 1356 aa19.8■□□□□ 0.76
CNKSR1-202ENST00000374253 RNMTO43148 476 aaKnown RBP19.79■□□□□ 0.76
CNKSR1-202ENST00000374253 GNAI3P08754 354 aa19.78■□□□□ 0.76
CNKSR1-202ENST00000374253 GSE1Q14687 1217 aa19.78■□□□□ 0.76
CNKSR1-202ENST00000374253 BABAM1Q9NWV8 329 aa19.78■□□□□ 0.76
CNKSR1-202ENST00000374253 NLRP2Q9NX02 1062 aa19.78■□□□□ 0.76
CNKSR1-202ENST00000374253 PI4KAP2A4QPH2 592 aa19.77■□□□□ 0.76
CNKSR1-202ENST00000374253 CHRNA2Q15822 529 aa19.77■□□□□ 0.76
CNKSR1-202ENST00000374253 PI4KAP1Q8N8J0 262 aa19.77■□□□□ 0.76
CNKSR1-202ENST00000374253 UBTFL1P0CB47 393 aaPredicted RBP19.77■□□□□ 0.76
CNKSR1-202ENST00000374253 RGPD5Q99666 1765 aa19.76■□□□□ 0.75
CNKSR1-202ENST00000374253 PROSER3Q2NL68 480 aa19.76■□□□□ 0.75
CNKSR1-202ENST00000374253 AMOTQ4VCS5 1084 aa19.76■□□□□ 0.75
CNKSR1-202ENST00000374253 SLIT3O75094 1523 aa19.76■□□□□ 0.75
CNKSR1-202ENST00000374253 NBPF7P0C2Y1 421 aaPredicted RBP19.75■□□□□ 0.75
CNKSR1-202ENST00000374253 ATP8B2P98198 1209 aa19.75■□□□□ 0.75
CNKSR1-202ENST00000374253 HSP90AB1P08238 724 aaKnown RBP19.75■□□□□ 0.75
CNKSR1-202ENST00000374253 PDE1AP54750 535 aa19.75■□□□□ 0.75
CNKSR1-202ENST00000374253 IL1RAPL2Q9NP60 686 aa19.75■□□□□ 0.75
CNKSR1-202ENST00000374253 ERBB3P21860 1342 aa19.75■□□□□ 0.75
CNKSR1-202ENST00000374253 SRCIN1Q9C0H9 1055 aa19.74■□□□□ 0.75
CNKSR1-202ENST00000374253 TRPM3Q9HCF6 1732 aaPredicted RBP19.74■□□□□ 0.75
CNKSR1-202ENST00000374253 SLC39A6Q13433 755 aa19.74■□□□□ 0.75
CNKSR1-202ENST00000374253 LRRCC1Q9C099 1032 aa19.74■□□□□ 0.75
CNKSR1-202ENST00000374253 CSB-PGBD3P0DP91 1061 aa19.73■□□□□ 0.75
CNKSR1-202ENST00000374253 MED1Q15648 1581 aaPredicted RBP19.72■□□□□ 0.75
CNKSR1-202ENST00000374253 PPP1R42Q7Z4L9 355 aa19.72■□□□□ 0.75
CNKSR1-202ENST00000374253 DNAAF4Q8WXU2 420 aa19.72■□□□□ 0.75
CNKSR1-202ENST00000374253 MST1RQ04912 1400 aa19.72■□□□□ 0.75
CNKSR1-202ENST00000374253 SOS1Q07889 1333 aaPredicted RBP19.71■□□□□ 0.75
CNKSR1-202ENST00000374253 CACNA1FO60840 1977 aa19.71■□□□□ 0.75
CNKSR1-202ENST00000374253 PHRF1Q9P1Y6 1649 aaKnown RBP19.71■□□□□ 0.75
CNKSR1-202ENST00000374253 GIGYF1O75420 1035 aaPredicted RBP19.7■□□□□ 0.74
CNKSR1-202ENST00000374253 HSP90AA1P07900 732 aaKnown RBP19.7■□□□□ 0.74
CNKSR1-202ENST00000374253 RAPGEF4Q8WZA2 1011 aa19.7■□□□□ 0.74
CNKSR1-202ENST00000374253 SNX21Q969T3 373 aa19.7■□□□□ 0.74
CNKSR1-202ENST00000374253 USP26Q9BXU7 913 aa19.7■□□□□ 0.74
CNKSR1-202ENST00000374253 CHMP5Q9NZZ3 219 aa19.7■□□□□ 0.74
CNKSR1-202ENST00000374253 LMO7Q8WWI1 1683 aa19.7■□□□□ 0.74
CNKSR1-202ENST00000374253 STRCP1A6NGW2 1772 aa19.7■□□□□ 0.74
CNKSR1-202ENST00000374253 KDM3BQ7LBC6 1761 aa19.7■□□□□ 0.74
CNKSR1-202ENST00000374253 AIMP1Q12904 312 aaKnown RBP19.7■□□□□ 0.74
CNKSR1-202ENST00000374253 BEND3Q5T5X7 828 aa19.7■□□□□ 0.74
CNKSR1-202ENST00000374253 NUTM1Q86Y26 1132 aa19.7■□□□□ 0.74
CNKSR1-202ENST00000374253 SRGAP3O43295 1099 aa19.69■□□□□ 0.74
CNKSR1-202ENST00000374253 SURF6O75683 361 aaKnown RBP19.69■□□□□ 0.74
CNKSR1-202ENST00000374253 RILPL2Q969X0 211 aa19.69■□□□□ 0.74
CNKSR1-202ENST00000374253 ADCY9O60503 1353 aa19.69■□□□□ 0.74
CNKSR1-202ENST00000374253 IBTKQ9P2D0 1353 aaPredicted RBP19.69■□□□□ 0.74
CNKSR1-202ENST00000374253 MX1P20591 662 aa19.69■□□□□ 0.74
CNKSR1-202ENST00000374253 TRIM6-TRIM34B2RNG4 842 aa19.68■□□□□ 0.74
CNKSR1-202ENST00000374253 MAP3K2Q9Y2U5 619 aa19.68■□□□□ 0.74
CNKSR1-202ENST00000374253 CWF19L2Q2TBE0 894 aaKnown RBP19.68■□□□□ 0.74
CNKSR1-202ENST00000374253 DBF4Q9UBU7 674 aaPredicted RBP19.68■□□□□ 0.74
CNKSR1-202ENST00000374253 MAP4K4O95819 1239 aaPredicted RBP19.67■□□□□ 0.74
CNKSR1-202ENST00000374253 CASC1Q6TDU7 716 aa19.67■□□□□ 0.74
CNKSR1-202ENST00000374253 HOXB7P09629 217 aa19.67■□□□□ 0.74
CNKSR1-202ENST00000374253 PIP4K2AP48426 406 aaPredicted RBP19.67■□□□□ 0.74
CNKSR1-202ENST00000374253 UNC5CLQ8IV45 518 aa19.67■□□□□ 0.74
CNKSR1-202ENST00000374253 NFATC2IPQ8NCF5 419 aa19.67■□□□□ 0.74
CNKSR1-202ENST00000374253 NCAPD2Q15021 1401 aa19.66■□□□□ 0.74
CNKSR1-202ENST00000374253 SALL3Q9BXA9 1300 aa19.66■□□□□ 0.74
CNKSR1-202ENST00000374253 K7ELQ4 463 aaPredicted RBP19.66■□□□□ 0.74
CNKSR1-202ENST00000374253 PXDNLA1KZ92 1463 aa19.65■□□□□ 0.74
CNKSR1-202ENST00000374253 SSH3Q8TE77 659 aa19.65■□□□□ 0.74
CNKSR1-202ENST00000374253 ARXQ96QS3 562 aa19.65■□□□□ 0.74
CNKSR1-202ENST00000374253 OSBPL3Q9H4L5 887 aa19.65■□□□□ 0.74
CNKSR1-202ENST00000374253 KIF1AQ12756 1690 aa19.65■□□□□ 0.74
CNKSR1-202ENST00000374253 MYL6BP14649 208 aa19.65■□□□□ 0.74
CNKSR1-202ENST00000374253 MCM4P33991 863 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 170 ms