RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 COL16A1Q07092 1604 aaPredicted RBP16.72■□□□□ 0.27
A1CF-204ENST00000373997 IPO8O15397 1037 aaKnown RBP16.72■□□□□ 0.27
A1CF-204ENST00000373997 BECN1Q14457 450 aa16.71■□□□□ 0.27
A1CF-204ENST00000373997 MVPQ14764 893 aaKnown RBP16.71■□□□□ 0.27
A1CF-204ENST00000373997 TAF7Q15545 349 aaPredicted RBP16.71■□□□□ 0.27
A1CF-204ENST00000373997 BRPF1P55201 1214 aaPredicted RBP16.7■□□□□ 0.26
A1CF-204ENST00000373997 WDR17Q8IZU2 1322 aa16.7■□□□□ 0.26
A1CF-204ENST00000373997 COL14A1Q05707 1796 aaKnown RBP16.7■□□□□ 0.26
A1CF-204ENST00000373997 ITPRIPQ8IWB1 547 aa16.7■□□□□ 0.26
A1CF-204ENST00000373997 RNMTO43148 476 aaKnown RBP16.69■□□□□ 0.26
A1CF-204ENST00000373997 TEFQ10587 303 aa16.69■□□□□ 0.26
A1CF-204ENST00000373997 TOM1L2Q6ZVM7 507 aa16.69■□□□□ 0.26
A1CF-204ENST00000373997 STRN4Q9NRL3 753 aa16.69■□□□□ 0.26
A1CF-204ENST00000373997 TMEM57Q8N5G2 664 aa16.69■□□□□ 0.26
A1CF-204ENST00000373997 RWDD1Q9H446 243 aaPredicted RBP16.69■□□□□ 0.26
A1CF-204ENST00000373997 PIP4K2BP78356 416 aa16.68■□□□□ 0.26
A1CF-204ENST00000373997 IL27Q8NEV9 243 aa16.68■□□□□ 0.26
A1CF-204ENST00000373997 OVOS2A0A0G2JMS6 1433 aa16.68■□□□□ 0.26
A1CF-204ENST00000373997 SHANK3Q9BYB0 1731 aa16.68■□□□□ 0.26
A1CF-204ENST00000373997 PLCH1Q4KWH8 1693 aa16.67■□□□□ 0.26
A1CF-204ENST00000373997 UPF2Q9HAU5 1272 aaKnown RBP16.67■□□□□ 0.26
A1CF-204ENST00000373997 SPG7Q9UQ90 795 aa16.67■□□□□ 0.26
A1CF-204ENST00000373997 PCDHB15Q9Y5E8 787 aa16.67■□□□□ 0.26
A1CF-204ENST00000373997 BABAM1Q9NWV8 329 aa16.66■□□□□ 0.26
A1CF-204ENST00000373997 KDM6AO15550 1401 aaPredicted RBP16.65■□□□□ 0.26
A1CF-204ENST00000373997 FRAT2O75474 233 aaPredicted RBP16.65■□□□□ 0.26
A1CF-204ENST00000373997 EVA1CP58658 441 aa16.65■□□□□ 0.26
A1CF-204ENST00000373997 NECTIN2Q92692 538 aa16.65■□□□□ 0.26
A1CF-204ENST00000373997 DDX19BQ9UMR2 479 aa16.65■□□□□ 0.26
A1CF-204ENST00000373997 BTBD11A6QL63 1104 aa16.64■□□□□ 0.25
A1CF-204ENST00000373997 TOM1O60784 492 aa16.64■□□□□ 0.25
A1CF-204ENST00000373997 LARP1Q6PKG0 1096 aaKnown RBP16.64■□□□□ 0.25
A1CF-204ENST00000373997 ARHGAP45Q92619 1136 aa16.64■□□□□ 0.25
A1CF-204ENST00000373997 SEC24BO95487 1268 aa16.64■□□□□ 0.25
A1CF-204ENST00000373997 PHKG2P15735 406 aa16.64■□□□□ 0.25
A1CF-204ENST00000373997 PDZRN3Q9UPQ7 1066 aa16.64■□□□□ 0.25
A1CF-204ENST00000373997 WNK3Q9BYP7 1800 aa16.63■□□□□ 0.25
A1CF-204ENST00000373997 KCNQ3O43525 872 aa16.63■□□□□ 0.25
A1CF-204ENST00000373997 ABCC4O15439 1325 aa16.63■□□□□ 0.25
A1CF-204ENST00000373997 SLC4A2P04920 1241 aa16.63■□□□□ 0.25
A1CF-204ENST00000373997 API5Q9BZZ5 524 aaKnown RBP16.63■□□□□ 0.25
A1CF-204ENST00000373997 BTG4Q9NY30 223 aa16.63■□□□□ 0.25
A1CF-204ENST00000373997 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.63■□□□□ 0.252e-8■■■■□ 21.1
A1CF-204ENST00000373997 PLEKHG2Q9H7P9 1386 aa16.62■□□□□ 0.25
A1CF-204ENST00000373997 RGS12O14924 1447 aa16.62■□□□□ 0.25
A1CF-204ENST00000373997 IFNL2Q8IZJ0 200 aa16.62■□□□□ 0.25
A1CF-204ENST00000373997 TBC1D32Q96NH3 1257 aa16.62■□□□□ 0.25
A1CF-204ENST00000373997 C5P01031 1676 aa16.62■□□□□ 0.25
A1CF-204ENST00000373997 UBAP1LF5GYI3 381 aa16.61■□□□□ 0.25
A1CF-204ENST00000373997 CYP27B1O15528 508 aa16.61■□□□□ 0.25
A1CF-204ENST00000373997 CARD10Q9BWT7 1032 aa16.61■□□□□ 0.25
A1CF-204ENST00000373997 STK31Q9BXU1 1019 aa16.61■□□□□ 0.25
A1CF-204ENST00000373997 EIF4A1P60842 406 aaKnown RBP16.61■□□□□ 0.25
A1CF-204ENST00000373997 CCDC30Q5VVM6 783 aa16.6■□□□□ 0.25
A1CF-204ENST00000373997 AEBP2Q6ZN18 517 aaPredicted RBP16.6■□□□□ 0.25
A1CF-204ENST00000373997 N4BP2Q86UW6 1770 aaPredicted RBP16.6■□□□□ 0.25
A1CF-204ENST00000373997 NRAPQ86VF7 1730 aa16.6■□□□□ 0.25
A1CF-204ENST00000373997 MRC1P22897 1456 aa16.6■□□□□ 0.25
A1CF-204ENST00000373997 G2E3Q7L622 706 aa16.6■□□□□ 0.25
A1CF-204ENST00000373997 IL2RBP14784 551 aa16.59■□□□□ 0.25
A1CF-204ENST00000373997 HDGFL1Q5TGJ6 251 aa16.59■□□□□ 0.25
A1CF-204ENST00000373997 ARXQ96QS3 562 aa16.59■□□□□ 0.25
A1CF-204ENST00000373997 PTPRCP08575 1304 aa16.59■□□□□ 0.25
A1CF-204ENST00000373997 SOS1Q07889 1333 aaPredicted RBP16.59■□□□□ 0.25
A1CF-204ENST00000373997 ZCRB1Q8TBF4 217 aaKnown RBP16.58■□□□□ 0.25
A1CF-204ENST00000373997 PCDH11XQ9BZA7 1347 aa16.58■□□□□ 0.25
A1CF-204ENST00000373997 PCDH11YQ9BZA8 1340 aa16.58■□□□□ 0.25
A1CF-204ENST00000373997 KAT6BQ8WYB5 2073 aa16.58■□□□□ 0.24
A1CF-204ENST00000373997 ADAMTS2O95450 1211 aa16.58■□□□□ 0.24
A1CF-204ENST00000373997 EIF2S2P20042 333 aaKnown RBP16.58■□□□□ 0.24
A1CF-204ENST00000373997 HDAC1Q13547 482 aaPredicted RBP16.58■□□□□ 0.24
A1CF-204ENST00000373997 SLC52A2Q9HAB3 445 aa16.58■□□□□ 0.24
A1CF-204ENST00000373997 TOGARAM1Q9Y4F4 1720 aa16.57■□□□□ 0.24
A1CF-204ENST00000373997 ZBTB40Q9NUA8 1239 aa16.57■□□□□ 0.24
A1CF-204ENST00000373997 NUTM2BA6NNL0 878 aaPredicted RBP16.57■□□□□ 0.24
A1CF-204ENST00000373997 NUTM2EB1AL46 878 aaPredicted RBP16.57■□□□□ 0.24
A1CF-204ENST00000373997 NUTM2AQ8IVF1 878 aaPredicted RBP16.57■□□□□ 0.24
A1CF-204ENST00000373997 DCAF5Q96JK2 942 aa16.57■□□□□ 0.24
A1CF-204ENST00000373997 BRPF3Q9ULD4 1205 aa16.57■□□□□ 0.24
A1CF-204ENST00000373997 HSP90AB1P08238 724 aaKnown RBP16.56■□□□□ 0.24
A1CF-204ENST00000373997 SLC39A6Q13433 755 aa16.56■□□□□ 0.24
A1CF-204ENST00000373997 NFATC2IPQ8NCF5 419 aa16.56■□□□□ 0.24
A1CF-204ENST00000373997 ANTXR1Q9H6X2 564 aa16.56■□□□□ 0.24
A1CF-204ENST00000373997 FLIIQ13045 1269 aa16.55■□□□□ 0.24
A1CF-204ENST00000373997 C1orf115Q9H7X2 142 aa16.55■□□□□ 0.24
A1CF-204ENST00000373997 NWD2Q9ULI1 1742 aa16.55■□□□□ 0.24
A1CF-204ENST00000373997 F6X3S4 739 aa16.54■□□□□ 0.24
A1CF-204ENST00000373997 ZBTB7BO15156 539 aaPredicted RBP16.54■□□□□ 0.24
A1CF-204ENST00000373997 HOXB7P09629 217 aa16.54■□□□□ 0.24
A1CF-204ENST00000373997 DDX54Q8TDD1 881 aaKnown RBP16.54■□□□□ 0.24
A1CF-204ENST00000373997 ITGB4P16144 1822 aa16.54■□□□□ 0.24
A1CF-204ENST00000373997 LAMB4A4D0S4 1761 aa16.54■□□□□ 0.24
A1CF-204ENST00000373997 FKBP5Q13451 457 aaPredicted RBP16.54■□□□□ 0.24
A1CF-204ENST00000373997 PRAMEF22A3QJZ6 481 aa16.53■□□□□ 0.24
A1CF-204ENST00000373997 CABP4P57796 275 aa16.53■□□□□ 0.24
A1CF-204ENST00000373997 INTS3Q68E01 1043 aaKnown RBP16.53■□□□□ 0.24
A1CF-204ENST00000373997 SLC4A10Q6U841 1118 aa16.53■□□□□ 0.24
A1CF-204ENST00000373997 TBC1D2Q9BYX2 928 aa16.53■□□□□ 0.24
A1CF-204ENST00000373997 CHPF2Q9P2E5 772 aa16.53■□□□□ 0.24
A1CF-204ENST00000373997 UBR2Q8IWV8 1755 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms