RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 NUCB1Q02818 461 aa9.44□□□□□ -0.9
HERC4-202ENST00000373700 HDAC1Q13547 482 aaPredicted RBP9.44□□□□□ -0.9
HERC4-202ENST00000373700 BICDL1Q6ZP65 573 aa9.44□□□□□ -0.9
HERC4-202ENST00000373700 RUFY2Q8WXA3 655 aa9.44□□□□□ -0.9
HERC4-202ENST00000373700 MADDQ8WXG6 1647 aa9.44□□□□□ -0.9
HERC4-202ENST00000373700 DIP2CQ9Y2E4 1556 aa9.44□□□□□ -0.9
HERC4-202ENST00000373700 SSFA2P28290 1259 aa9.44□□□□□ -0.9
HERC4-202ENST00000373700 GNL2Q13823 731 aaKnown RBP9.44□□□□□ -0.9
HERC4-202ENST00000373700 AMOTQ4VCS5 1084 aa9.44□□□□□ -0.9
HERC4-202ENST00000373700 DNAAF4Q8WXU2 420 aa9.44□□□□□ -0.9
HERC4-202ENST00000373700 IP6K1Q92551 441 aa9.44□□□□□ -0.9
HERC4-202ENST00000373700 SMC3Q9UQE7 1217 aa9.44□□□□□ -0.9
HERC4-202ENST00000373700 IL16Q14005 1332 aa9.43□□□□□ -0.9
HERC4-202ENST00000373700 CWF19L2Q2TBE0 894 aaKnown RBP9.43□□□□□ -0.9
HERC4-202ENST00000373700 ACSBG1Q96GR2 724 aa9.43□□□□□ -0.9
HERC4-202ENST00000373700 FSD1Q9BTV5 496 aa9.43□□□□□ -0.9
HERC4-202ENST00000373700 INO80Q9ULG1 1556 aaPredicted RBP9.43□□□□□ -0.9
HERC4-202ENST00000373700 ZNF521Q96K83 1311 aa9.43□□□□□ -0.9
HERC4-202ENST00000373700 KDM4AO75164 1064 aa9.43□□□□□ -0.9
HERC4-202ENST00000373700 OTUD7AQ8TE49 926 aaPredicted RBP9.43□□□□□ -0.9
HERC4-202ENST00000373700 CCDC8Q9H0W5 538 aaPredicted RBP9.43□□□□□ -0.9
HERC4-202ENST00000373700 ISY1Q9ULR0 285 aaKnown RBP9.43□□□□□ -0.9
HERC4-202ENST00000373700 AACSQ86V21 672 aa9.43□□□□□ -0.9
HERC4-202ENST00000373700 NASPP49321 788 aaPredicted RBP9.42□□□□□ -0.9
HERC4-202ENST00000373700 IFNL2Q8IZJ0 200 aa9.42□□□□□ -0.9
HERC4-202ENST00000373700 H3BQV1 296 aa9.42□□□□□ -0.9
HERC4-202ENST00000373700 APPP05067 770 aa9.42□□□□□ -0.9
HERC4-202ENST00000373700 MRE11P49959 708 aa9.42□□□□□ -0.9
HERC4-202ENST00000373700 BMP2KLQ5H9B9 411 aa9.42□□□□□ -0.9
HERC4-202ENST00000373700 IFFO2Q5TF58 517 aa9.42□□□□□ -0.9
HERC4-202ENST00000373700 CNTROBQ8N137 903 aa9.42□□□□□ -0.9
HERC4-202ENST00000373700 STK11IPQ8N1F8 1099 aa9.42□□□□□ -0.9
HERC4-202ENST00000373700 TNPO1Q92973 898 aaKnown RBP9.42□□□□□ -0.9
HERC4-202ENST00000373700 FBXW7Q969H0 707 aa9.42□□□□□ -0.9
HERC4-202ENST00000373700 DBF4Q9UBU7 674 aaPredicted RBP9.42□□□□□ -0.9
HERC4-202ENST00000373700 FIBPO43427 364 aa9.42□□□□□ -0.9
HERC4-202ENST00000373700 KIAA2012Q0VF49 1180 aa9.42□□□□□ -0.9
HERC4-202ENST00000373700 COPS6Q7L5N1 327 aa9.42□□□□□ -0.9
HERC4-202ENST00000373700 UBE3BQ7Z3V4 1068 aa9.42□□□□□ -0.9
HERC4-202ENST00000373700 PPP1R42Q7Z4L9 355 aa9.42□□□□□ -0.9
HERC4-202ENST00000373700 IL17REQ8NFR9 667 aa9.42□□□□□ -0.9
HERC4-202ENST00000373700 TMOD3Q9NYL9 352 aa9.42□□□□□ -0.9
HERC4-202ENST00000373700 ARHGAP31Q2M1Z3 1444 aa9.42□□□□□ -0.9
HERC4-202ENST00000373700 MX1P20591 662 aa9.41□□□□□ -0.9
HERC4-202ENST00000373700 HSP90AB4PQ58FF6 505 aa9.41□□□□□ -0.9
HERC4-202ENST00000373700 FAM184AQ8NB25 1140 aa9.41□□□□□ -0.9
HERC4-202ENST00000373700 NGLY1Q96IV0 654 aa9.41□□□□□ -0.9
HERC4-202ENST00000373700 PA2G4Q9UQ80 394 aaKnown RBP9.41□□□□□ -0.9
HERC4-202ENST00000373700 STK3Q13188 491 aa9.41□□□□□ -0.9
HERC4-202ENST00000373700 SMC5Q8IY18 1101 aa9.41□□□□□ -0.9
HERC4-202ENST00000373700 ZFYVE9O95405 1425 aa9.41□□□□□ -0.9
HERC4-202ENST00000373700 ZBTB7BO15156 539 aaPredicted RBP9.41□□□□□ -0.9
HERC4-202ENST00000373700 SDSP20132 328 aa9.41□□□□□ -0.9
HERC4-202ENST00000373700 WASHC4Q2M389 1173 aa9.41□□□□□ -0.9
HERC4-202ENST00000373700 TRMT2AQ8IZ69 625 aaKnown RBP9.41□□□□□ -0.9
HERC4-202ENST00000373700 XAGE3Q8WTP9 111 aa9.41□□□□□ -0.9
HERC4-202ENST00000373700 PLEKHG1Q9ULL1 1385 aa9.41□□□□□ -0.9
HERC4-202ENST00000373700 A0A087WZG4 1122 aa9.4□□□□□ -0.9
HERC4-202ENST00000373700 BOLA2Q9H3K6 86 aa9.4□□□□□ -0.9
HERC4-202ENST00000373700 TMEM94Q12767 1356 aa9.4□□□□□ -0.9
HERC4-202ENST00000373700 GLI2P10070 1586 aa9.4□□□□□ -0.9
HERC4-202ENST00000373700 TULP1O00294 542 aaPredicted RBP9.4□□□□□ -0.9
HERC4-202ENST00000373700 DTNBO60941 627 aa9.4□□□□□ -0.9
HERC4-202ENST00000373700 BCL11BQ9C0K0 894 aaPredicted RBP9.4□□□□□ -0.91
HERC4-202ENST00000373700 GRPEL1Q9HAV7 217 aa9.4□□□□□ -0.91
HERC4-202ENST00000373700 SYNMO15061 1565 aa9.4□□□□□ -0.91
HERC4-202ENST00000373700 SBNO1A3KN83 1393 aa9.39□□□□□ -0.91
HERC4-202ENST00000373700 CHL1O00533 1208 aa9.39□□□□□ -0.91
HERC4-202ENST00000373700 GDPD2Q9HCC8 539 aa9.39□□□□□ -0.91
HERC4-202ENST00000373700 BTG4Q9NY30 223 aa9.39□□□□□ -0.91
HERC4-202ENST00000373700 ADGRB3O60242 1522 aa9.39□□□□□ -0.91
HERC4-202ENST00000373700 ALKQ9UM73 1620 aa9.39□□□□□ -0.91
HERC4-202ENST00000373700 AKAP4Q5JQC9 854 aa9.39□□□□□ -0.91
HERC4-202ENST00000373700 KIF6Q6ZMV9 814 aa9.39□□□□□ -0.91
HERC4-202ENST00000373700 ZCRB1Q8TBF4 217 aaKnown RBP9.39□□□□□ -0.91
HERC4-202ENST00000373700 SLAIN2Q9P270 581 aa9.39□□□□□ -0.91
HERC4-202ENST00000373700 NLRP1Q9C000 1473 aa9.39□□□□□ -0.91
HERC4-202ENST00000373700 PRAMEF22A3QJZ6 481 aa9.39□□□□□ -0.91
HERC4-202ENST00000373700 UBAP1LF5GYI3 381 aa9.39□□□□□ -0.91
HERC4-202ENST00000373700 FKBP4Q02790 459 aaKnown RBP eCLIP9.39□□□□□ -0.91
HERC4-202ENST00000373700 SF3A1Q15459 793 aaKnown RBP9.39□□□□□ -0.91
HERC4-202ENST00000373700 CEBPZQ03701 1054 aaKnown RBP9.38□□□□□ -0.91
HERC4-202ENST00000373700 CHMP4CQ96CF2 233 aa9.38□□□□□ -0.91
HERC4-202ENST00000373700 FMNL2Q96PY5 1086 aa9.38□□□□□ -0.91
HERC4-202ENST00000373700 PANK2Q9BZ23 570 aa9.38□□□□□ -0.91
HERC4-202ENST00000373700 ZNF335Q9H4Z2 1342 aaPredicted RBP9.38□□□□□ -0.91
HERC4-202ENST00000373700 TTC22Q5TAA0 569 aa9.38□□□□□ -0.91
HERC4-202ENST00000373700 KLHDC4Q8TBB5 520 aa9.38□□□□□ -0.91
HERC4-202ENST00000373700 MAP3K5Q99683 1374 aa9.38□□□□□ -0.91
HERC4-202ENST00000373700 CLTCQ00610 1675 aaKnown RBP9.38□□□□□ -0.91
HERC4-202ENST00000373700 EXOC5O00471 708 aa9.38□□□□□ -0.91
HERC4-202ENST00000373700 RNMTO43148 476 aaKnown RBP9.38□□□□□ -0.91
HERC4-202ENST00000373700 ARHGAP45Q92619 1136 aa9.38□□□□□ -0.91
HERC4-202ENST00000373700 CNNM1Q9NRU3 951 aa9.38□□□□□ -0.91
HERC4-202ENST00000373700 FERMT3Q86UX7 667 aa9.37□□□□□ -0.91
HERC4-202ENST00000373700 ANKRD44Q8N8A2 993 aa9.37□□□□□ -0.91
HERC4-202ENST00000373700 BICD2Q8TD16 824 aa9.37□□□□□ -0.91
HERC4-202ENST00000373700 C8orf37Q96NL8 207 aa9.37□□□□□ -0.91
HERC4-202ENST00000373700 ATP6V1DQ9Y5K8 247 aa9.37□□□□□ -0.91
HERC4-202ENST00000373700 PTPRCP08575 1304 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms