RNA–Protein interactions for RNA: ENST00000373645.3

SP140-202, Transcript of SP140 nuclear body protein, humanhuman

TSL 1 (best) BASIC

Gene SP140, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-202ENST00000373645 GRIN3BO60391 1043 aa10.61□□□□□ -0.71
SP140-202ENST00000373645 SPDYE1Q8NFV5 336 aaPredicted RBP10.61□□□□□ -0.71
SP140-202ENST00000373645 GGNBP2Q9H3C7 697 aa10.61□□□□□ -0.71
SP140-202ENST00000373645 RTL1A6NKG5 1358 aa10.61□□□□□ -0.71
SP140-202ENST00000373645 UBR3Q6ZT12 1888 aa10.6□□□□□ -0.71
SP140-202ENST00000373645 CYP27B1O15528 508 aa10.6□□□□□ -0.71
SP140-202ENST00000373645 PHF14O94880 888 aa10.6□□□□□ -0.71
SP140-202ENST00000373645 GPBP1L1Q9HC44 474 aaPredicted RBP10.6□□□□□ -0.71
SP140-202ENST00000373645 IGSF1Q8N6C5 1336 aa10.59□□□□□ -0.71
SP140-202ENST00000373645 ITGB4P16144 1822 aa10.59□□□□□ -0.71
SP140-202ENST00000373645 HSP90AB2PQ58FF8 381 aa10.59□□□□□ -0.71
SP140-202ENST00000373645 MPRIPQ6WCQ1 1025 aa10.59□□□□□ -0.71
SP140-202ENST00000373645 POLR3GLQ9BT43 218 aa10.59□□□□□ -0.71
SP140-202ENST00000373645 CD2APQ9Y5K6 639 aa10.59□□□□□ -0.71
SP140-202ENST00000373645 FYB1O15117 783 aa10.58□□□□□ -0.72
SP140-202ENST00000373645 HSPA6P17066 643 aa10.58□□□□□ -0.72
SP140-202ENST00000373645 DDX10Q13206 875 aaKnown RBP10.58□□□□□ -0.72
SP140-202ENST00000373645 RAPGEF4Q8WZA2 1011 aa10.58□□□□□ -0.72
SP140-202ENST00000373645 MAP2P11137 1827 aaKnown RBP10.58□□□□□ -0.72
SP140-202ENST00000373645 PCDH11XQ9BZA7 1347 aa10.58□□□□□ -0.72
SP140-202ENST00000373645 PCDH11YQ9BZA8 1340 aa10.58□□□□□ -0.72
SP140-202ENST00000373645 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.57□□□□□ -0.72
SP140-202ENST00000373645 LINC00116Q8NCU8 138 aa10.57□□□□□ -0.72
SP140-202ENST00000373645 PKD1L3Q7Z443 1732 aa10.57□□□□□ -0.72
SP140-202ENST00000373645 KIF3CO14782 793 aa10.56□□□□□ -0.72
SP140-202ENST00000373645 TATP17735 454 aaPredicted RBP10.56□□□□□ -0.72
SP140-202ENST00000373645 PIGBQ92521 554 aa10.56□□□□□ -0.72
SP140-202ENST00000373645 AK7Q96M32 723 aa10.56□□□□□ -0.72
SP140-202ENST00000373645 EMILIN1Q9Y6C2 1016 aa10.56□□□□□ -0.72
SP140-202ENST00000373645 SMG6Q86US8 1419 aaKnown RBP10.56□□□□□ -0.72
SP140-202ENST00000373645 KIAA1551Q9HCM1 1747 aa10.55□□□□□ -0.72
SP140-202ENST00000373645 CICQ96RK0 1608 aaPredicted RBP10.55□□□□□ -0.72
SP140-202ENST00000373645 INSRP06213 1382 aa10.55□□□□□ -0.72
SP140-202ENST00000373645 ITPK1Q13572 414 aa10.55□□□□□ -0.72
SP140-202ENST00000373645 KIF20BQ96Q89 1820 aa10.55□□□□□ -0.72
SP140-202ENST00000373645 CGNL1Q0VF96 1302 aa10.55□□□□□ -0.72
SP140-202ENST00000373645 PXDNLA1KZ92 1463 aa10.55□□□□□ -0.72
SP140-202ENST00000373645 FLT4P35916 1363 aa10.54□□□□□ -0.72
SP140-202ENST00000373645 NCAPD2Q15021 1401 aa10.54□□□□□ -0.72
SP140-202ENST00000373645 N4BP2Q86UW6 1770 aaPredicted RBP10.53□□□□□ -0.72
SP140-202ENST00000373645 LOC102724428A0A0B4J2F2 783 aa10.53□□□□□ -0.72
SP140-202ENST00000373645 SIK1P57059 783 aa10.53□□□□□ -0.72
SP140-202ENST00000373645 FLAD1Q8NFF5 587 aa10.53□□□□□ -0.72
SP140-202ENST00000373645 ASAP1Q9ULH1 1129 aa10.53□□□□□ -0.72
SP140-202ENST00000373645 GNPATO15228 680 aa10.52□□□□□ -0.73
SP140-202ENST00000373645 DIEXFQ68CQ4 756 aaKnown RBP10.52□□□□□ -0.73
SP140-202ENST00000373645 ANKRD26Q9UPS8 1709 aa10.51□□□□□ -0.73
SP140-202ENST00000373645 MMP10P09238 476 aa10.51□□□□□ -0.73
SP140-202ENST00000373645 SSFA2P28290 1259 aa10.51□□□□□ -0.73
SP140-202ENST00000373645 SMARCC1Q92922 1105 aaPredicted RBP10.51□□□□□ -0.73
SP140-202ENST00000373645 CARD14Q9BXL6 1004 aa10.51□□□□□ -0.73
SP140-202ENST00000373645 PANK3Q9H999 370 aa10.51□□□□□ -0.73
SP140-202ENST00000373645 KIF13BQ9NQT8 1826 aa10.51□□□□□ -0.73
SP140-202ENST00000373645 KDRP35968 1356 aa10.51□□□□□ -0.73
SP140-202ENST00000373645 NSD3Q9BZ95 1437 aa10.5□□□□□ -0.73
SP140-202ENST00000373645 PPM1GO15355 546 aaPredicted RBP10.5□□□□□ -0.73
SP140-202ENST00000373645 NKX1-1Q15270 411 aaPredicted RBP10.5□□□□□ -0.73
SP140-202ENST00000373645 SLC4A9Q96Q91 983 aa10.5□□□□□ -0.73
SP140-202ENST00000373645 NMRK2Q9NPI5 230 aa10.5□□□□□ -0.73
SP140-202ENST00000373645 C10orf71Q711Q0 1435 aa10.5□□□□□ -0.73
SP140-202ENST00000373645 A0A0G2JLW4 131 aa10.49□□□□□ -0.73
SP140-202ENST00000373645 PER1O15534 1290 aaPredicted RBP10.49□□□□□ -0.73
SP140-202ENST00000373645 HTRA3P83110 453 aa10.49□□□□□ -0.73
SP140-202ENST00000373645 EYA1Q99502 592 aa10.49□□□□□ -0.73
SP140-202ENST00000373645 TMOD3Q9NYL9 352 aa10.49□□□□□ -0.73
SP140-202ENST00000373645 ATP6V1AP38606 617 aa10.48□□□□□ -0.73
SP140-202ENST00000373645 DNAJC5GQ8N7S2 189 aa10.48□□□□□ -0.73
SP140-202ENST00000373645 ATG3Q9NT62 314 aa10.48□□□□□ -0.73
SP140-202ENST00000373645 BCS1LQ9Y276 419 aa10.48□□□□□ -0.73
SP140-202ENST00000373645 BRCA1P38398 1863 aaKnown RBP10.48□□□□□ -0.73
SP140-202ENST00000373645 KIF24Q5T7B8 1368 aa10.48□□□□□ -0.73
SP140-202ENST00000373645 PHKG2P15735 406 aa10.47□□□□□ -0.73
SP140-202ENST00000373645 DPEP1P16444 411 aa10.47□□□□□ -0.73
SP140-202ENST00000373645 KNSTRNQ9Y448 316 aa10.47□□□□□ -0.73
SP140-202ENST00000373645 C4AP0C0L4 1744 aa10.47□□□□□ -0.73
SP140-202ENST00000373645 MYH14Q7Z406 1995 aaKnown RBP10.46□□□□□ -0.73
SP140-202ENST00000373645 APLP1P51693 650 aa10.46□□□□□ -0.73
SP140-202ENST00000373645 SPG7Q9UQ90 795 aa10.46□□□□□ -0.73
SP140-202ENST00000373645 COL5A3P25940 1745 aaPredicted RBP10.46□□□□□ -0.74
SP140-202ENST00000373645 WDR90Q96KV7 1748 aa10.46□□□□□ -0.74
SP140-202ENST00000373645 KDM6AO15550 1401 aaPredicted RBP10.45□□□□□ -0.74
SP140-202ENST00000373645 CHADLQ6NUI6 762 aa10.45□□□□□ -0.74
SP140-202ENST00000373645 ARHGAP27Q6ZUM4 889 aa10.45□□□□□ -0.74
SP140-202ENST00000373645 KCPQ6ZWJ8 1503 aa10.44□□□□□ -0.74
SP140-202ENST00000373645 ANP32CO43423 234 aa10.44□□□□□ -0.74
SP140-202ENST00000373645 TOMM70O94826 608 aa10.44□□□□□ -0.74
SP140-202ENST00000373645 GYS1P13807 737 aa10.44□□□□□ -0.74
SP140-202ENST00000373645 KCNA3P22001 575 aa10.44□□□□□ -0.74
SP140-202ENST00000373645 EIF4A2Q14240 407 aaKnown RBP10.44□□□□□ -0.74
SP140-202ENST00000373645 ARHGEF1Q92888 912 aaKnown RBP10.44□□□□□ -0.74
SP140-202ENST00000373645 POLKQ9UBT6 870 aa10.44□□□□□ -0.74
SP140-202ENST00000373645 FCHSD2O94868 740 aa10.43□□□□□ -0.74
SP140-202ENST00000373645 TNNT2P45379 298 aaPredicted RBP10.43□□□□□ -0.74
SP140-202ENST00000373645 C9orf131Q5VYM1 1079 aa10.43□□□□□ -0.74
SP140-202ENST00000373645 IFNL2Q8IZJ0 200 aa10.43□□□□□ -0.74
SP140-202ENST00000373645 SRP68Q9UHB9 627 aaKnown RBP10.43□□□□□ -0.74
SP140-202ENST00000373645 RTCBQ9Y3I0 505 aaKnown RBP10.43□□□□□ -0.74
SP140-202ENST00000373645 TGFB2P61812 414 aa10.42□□□□□ -0.74
SP140-202ENST00000373645 DDR1Q08345 913 aa10.42□□□□□ -0.74
SP140-202ENST00000373645 AMER1Q5JTC6 1135 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms