RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 SLC4A9Q96Q91 983 aa24.42■■□□□ 1.5
TRAPPC3-202ENST00000373162 VIRMAQ69YN4 1812 aaKnown RBP24.42■■□□□ 1.5
TRAPPC3-202ENST00000373162 LINC00116Q8NCU8 138 aa24.41■■□□□ 1.5
TRAPPC3-202ENST00000373162 ARXQ96QS3 562 aa24.41■■□□□ 1.5
TRAPPC3-202ENST00000373162 SYT17Q9BSW7 474 aa24.41■■□□□ 1.5
TRAPPC3-202ENST00000373162 HMGB2P26583 209 aaKnown RBP24.39■■□□□ 1.49
TRAPPC3-202ENST00000373162 DIAPH1O60610 1272 aaKnown RBP24.38■■□□□ 1.49
TRAPPC3-202ENST00000373162 TJP1Q07157 1748 aa24.38■■□□□ 1.49
TRAPPC3-202ENST00000373162 YY1P25490 414 aa24.36■■□□□ 1.49
TRAPPC3-202ENST00000373162 HMOX1P09601 288 aa24.35■■□□□ 1.49
TRAPPC3-202ENST00000373162 AKAP4Q5JQC9 854 aa24.35■■□□□ 1.49
TRAPPC3-202ENST00000373162 FLAD1Q8NFF5 587 aa24.35■■□□□ 1.49
TRAPPC3-202ENST00000373162 C1orf141Q5JVX7 400 aa24.34■■□□□ 1.49
TRAPPC3-202ENST00000373162 MYH14Q7Z406 1995 aaKnown RBP24.34■■□□□ 1.49
TRAPPC3-202ENST00000373162 SSFA2P28290 1259 aa24.32■■□□□ 1.48
TRAPPC3-202ENST00000373162 ATP6V1AP38606 617 aa24.32■■□□□ 1.48
TRAPPC3-202ENST00000373162 MTHFSDQ2M296 383 aaKnown RBP24.32■■□□□ 1.48
TRAPPC3-202ENST00000373162 SMIM5Q71RC9 77 aa24.32■■□□□ 1.48
TRAPPC3-202ENST00000373162 AK7Q96M32 723 aa24.32■■□□□ 1.48
TRAPPC3-202ENST00000373162 CABP4P57796 275 aa24.31■■□□□ 1.48
TRAPPC3-202ENST00000373162 UBR2Q8IWV8 1755 aa24.3■■□□□ 1.48
TRAPPC3-202ENST00000373162 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.3■■□□□ 1.48
TRAPPC3-202ENST00000373162 POLD1P28340 1107 aa24.3■■□□□ 1.48
TRAPPC3-202ENST00000373162 NFATC2IPQ8NCF5 419 aa24.3■■□□□ 1.48
TRAPPC3-202ENST00000373162 KCPQ6ZWJ8 1503 aa24.3■■□□□ 1.48
TRAPPC3-202ENST00000373162 C4AP0C0L4 1744 aa24.3■■□□□ 1.48
TRAPPC3-202ENST00000373162 SIPA1L3O60292 1781 aaPredicted RBP24.29■■□□□ 1.48
TRAPPC3-202ENST00000373162 PPP2R1AP30153 589 aa24.29■■□□□ 1.48
TRAPPC3-202ENST00000373162 LGR6Q9HBX8 967 aa24.29■■□□□ 1.48
TRAPPC3-202ENST00000373162 CNTNAP4Q9C0A0 1308 aa24.29■■□□□ 1.48
TRAPPC3-202ENST00000373162 RNMTO43148 476 aaKnown RBP24.28■■□□□ 1.48
TRAPPC3-202ENST00000373162 MSL1Q68DK7 614 aa24.28■■□□□ 1.48
TRAPPC3-202ENST00000373162 SLC52A2Q9HAB3 445 aa24.28■■□□□ 1.48
TRAPPC3-202ENST00000373162 RC3H1Q5TC82 1133 aaKnown RBP24.27■■□□□ 1.48
TRAPPC3-202ENST00000373162 CNGB1Q14028 1251 aaPredicted RBP24.26■■□□□ 1.47
TRAPPC3-202ENST00000373162 GNPATO15228 680 aa24.25■■□□□ 1.47
TRAPPC3-202ENST00000373162 NLGN2Q8NFZ4 835 aa24.25■■□□□ 1.47
TRAPPC3-202ENST00000373162 MSH5O43196 834 aa24.24■■□□□ 1.47
TRAPPC3-202ENST00000373162 PHF14O94880 888 aa24.24■■□□□ 1.47
TRAPPC3-202ENST00000373162 RBM42Q9BTD8 480 aaKnown RBP24.24■■□□□ 1.47
TRAPPC3-202ENST00000373162 RSPH6AQ9H0K4 717 aa24.24■■□□□ 1.47
TRAPPC3-202ENST00000373162 CHD4Q14839 1912 aa24.23■■□□□ 1.47
TRAPPC3-202ENST00000373162 GOLGB1Q14789 3259 aaKnown RBP24.22■■□□□ 1.47
TRAPPC3-202ENST00000373162 CEMIPQ8WUJ3 1361 aa24.21■■□□□ 1.47
TRAPPC3-202ENST00000373162 U2SURPO15042 1029 aaKnown RBP24.21■■□□□ 1.47
TRAPPC3-202ENST00000373162 KIF13BQ9NQT8 1826 aa24.21■■□□□ 1.47
TRAPPC3-202ENST00000373162 KIAA1551Q9HCM1 1747 aa24.21■■□□□ 1.47
TRAPPC3-202ENST00000373162 PTCD1O75127 700 aaKnown RBP24.2■■□□□ 1.46
TRAPPC3-202ENST00000373162 RPS6KA4O75676 772 aa24.2■■□□□ 1.46
TRAPPC3-202ENST00000373162 ADRA2BP18089 450 aa24.2■■□□□ 1.46
TRAPPC3-202ENST00000373162 IL17REQ8NFR9 667 aa24.19■■□□□ 1.46
TRAPPC3-202ENST00000373162 PHACTR3Q96KR7 559 aa24.19■■□□□ 1.46
TRAPPC3-202ENST00000373162 CFAP53Q96M91 514 aa24.19■■□□□ 1.46
TRAPPC3-202ENST00000373162 DCAF8L1A6NGE4 600 aa24.18■■□□□ 1.46
TRAPPC3-202ENST00000373162 GAS2L2Q8NHY3 880 aa24.18■■□□□ 1.46
TRAPPC3-202ENST00000373162 RTCBQ9Y3I0 505 aaKnown RBP24.18■■□□□ 1.46
TRAPPC3-202ENST00000373162 PRKAR2BP31323 418 aa24.17■■□□□ 1.46
TRAPPC3-202ENST00000373162 CRKLP46109 303 aaKnown RBP24.17■■□□□ 1.46
TRAPPC3-202ENST00000373162 ARHGEF1Q92888 912 aaKnown RBP24.17■■□□□ 1.46
TRAPPC3-202ENST00000373162 CD2APQ9Y5K6 639 aa24.17■■□□□ 1.46
TRAPPC3-202ENST00000373162 SLC39A6Q13433 755 aa24.16■■□□□ 1.46
TRAPPC3-202ENST00000373162 INTS5Q6P9B9 1019 aaKnown RBP24.16■■□□□ 1.46
TRAPPC3-202ENST00000373162 GNAT3A8MTJ3 354 aa24.14■■□□□ 1.45
TRAPPC3-202ENST00000373162 GYS1P13807 737 aa24.14■■□□□ 1.45
TRAPPC3-202ENST00000373162 TRAPPC3LQ5T215 181 aa24.14■■□□□ 1.45
TRAPPC3-202ENST00000373162 DNAJC10Q8IXB1 793 aa24.14■■□□□ 1.45
TRAPPC3-202ENST00000373162 KLHL34Q8N239 644 aa24.13■■□□□ 1.45
TRAPPC3-202ENST00000373162 FCHSD2O94868 740 aa24.12■■□□□ 1.45
TRAPPC3-202ENST00000373162 CYP19A1P11511 503 aaPredicted RBP24.12■■□□□ 1.45
TRAPPC3-202ENST00000373162 VSIG10Q8N0Z9 540 aa24.12■■□□□ 1.45
TRAPPC3-202ENST00000373162 NUDCQ9Y266 331 aa24.12■■□□□ 1.45
TRAPPC3-202ENST00000373162 C10orf71Q711Q0 1435 aa24.11■■□□□ 1.45
TRAPPC3-202ENST00000373162 YBX3P16989 372 aaKnown RBP eCLIP24.11■■□□□ 1.459e-6■■■□□ 18.1
TRAPPC3-202ENST00000373162 ZNF784Q8NCA9 323 aaPredicted RBP24.11■■□□□ 1.45
TRAPPC3-202ENST00000373162 SOS1Q07889 1333 aaPredicted RBP24.1■■□□□ 1.45
TRAPPC3-202ENST00000373162 USP42Q9H9J4 1324 aaKnown RBP24.1■■□□□ 1.45
TRAPPC3-202ENST00000373162 MMP10P09238 476 aa24.09■■□□□ 1.45
TRAPPC3-202ENST00000373162 U2AF1L5P0DN76 240 aaPredicted RBP24.09■■□□□ 1.45
TRAPPC3-202ENST00000373162 U2AF1Q01081 240 aaKnown RBP eCLIP24.09■■□□□ 1.45
TRAPPC3-202ENST00000373162 CCDC87Q9NVE4 849 aa24.09■■□□□ 1.45
TRAPPC3-202ENST00000373162 PXDNLA1KZ92 1463 aa24.08■■□□□ 1.45
TRAPPC3-202ENST00000373162 NLGN1Q8N2Q7 840 aa24.08■■□□□ 1.45
TRAPPC3-202ENST00000373162 DLG5Q8TDM6 1919 aa24.07■■□□□ 1.44
TRAPPC3-202ENST00000373162 HEG1Q9ULI3 1381 aa24.06■■□□□ 1.44
TRAPPC3-202ENST00000373162 GPR162Q16538 588 aa24.06■■□□□ 1.44
TRAPPC3-202ENST00000373162 ZNF790Q6PG37 636 aa24.06■■□□□ 1.44
TRAPPC3-202ENST00000373162 ZNF496Q96IT1 587 aaPredicted RBP24.06■■□□□ 1.44
TRAPPC3-202ENST00000373162 SRP68Q9UHB9 627 aaKnown RBP24.06■■□□□ 1.44
TRAPPC3-202ENST00000373162 BRCA1P38398 1863 aaKnown RBP24.06■■□□□ 1.44
TRAPPC3-202ENST00000373162 RFC4P35249 363 aa24.05■■□□□ 1.44
TRAPPC3-202ENST00000373162 TEFQ10587 303 aa24.05■■□□□ 1.44
TRAPPC3-202ENST00000373162 ZBTB1Q9Y2K1 713 aa24.05■■□□□ 1.44
TRAPPC3-202ENST00000373162 NRXN2Q9P2S2 1712 aa24.04■■□□□ 1.44
TRAPPC3-202ENST00000373162 PLEKHF1Q96S99 279 aa24.04■■□□□ 1.44
TRAPPC3-202ENST00000373162 COL15A1P39059 1388 aa24.03■■□□□ 1.44
TRAPPC3-202ENST00000373162 FKBP8Q14318 412 aa24.03■■□□□ 1.44
TRAPPC3-202ENST00000373162 N4BP2Q86UW6 1770 aaPredicted RBP24.03■■□□□ 1.44
TRAPPC3-202ENST00000373162 SCN7AQ01118 1682 aa24.02■■□□□ 1.44
TRAPPC3-202ENST00000373162 DDR1Q08345 913 aa24.02■■□□□ 1.44
TRAPPC3-202ENST00000373162 KCNQ3O43525 872 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms