RNA–Protein interactions for RNA: ENST00000372731.8

SPTAN1-202, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPTAN1, Length 7,889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-202ENST00000372731 TSNARE1Q96NA8 513 aa10.73□□□□□ -0.69
SPTAN1-202ENST00000372731 SYNJ2O15056 1496 aa10.73□□□□□ -0.69
SPTAN1-202ENST00000372731 TAF12Q16514 161 aa10.73□□□□□ -0.69
SPTAN1-202ENST00000372731 TTC16Q8NEE8 873 aa10.73□□□□□ -0.69
SPTAN1-202ENST00000372731 RTEL1-TNFRSF6BF6WH68 1400 aa10.73□□□□□ -0.69
SPTAN1-202ENST00000372731 SLC5A1P13866 664 aa10.73□□□□□ -0.69
SPTAN1-202ENST00000372731 UBA5Q9GZZ9 404 aa10.73□□□□□ -0.69
SPTAN1-202ENST00000372731 CCDC39Q9UFE4 941 aa10.73□□□□□ -0.69
SPTAN1-202ENST00000372731 FERP16591 822 aa10.73□□□□□ -0.69
SPTAN1-202ENST00000372731 NFKBIBQ15653 356 aa10.73□□□□□ -0.69
SPTAN1-202ENST00000372731 KIAA1328Q86T90 577 aa10.73□□□□□ -0.69
SPTAN1-202ENST00000372731 LRRCC1Q9C099 1032 aa10.73□□□□□ -0.69
SPTAN1-202ENST00000372731 KIAA0754O94854 1291 aa10.72□□□□□ -0.69
SPTAN1-202ENST00000372731 CETN1Q12798 172 aa10.72□□□□□ -0.69
SPTAN1-202ENST00000372731 EIF5P55010 431 aaKnown RBP10.72□□□□□ -0.69
SPTAN1-202ENST00000372731 LEKR1Q6ZMV7 388 aa10.72□□□□□ -0.69
SPTAN1-202ENST00000372731 C22orf23Q9BZE7 217 aa10.72□□□□□ -0.69
SPTAN1-202ENST00000372731 SLC4A2P04920 1241 aa10.72□□□□□ -0.69
SPTAN1-202ENST00000372731 AACSQ86V21 672 aa10.72□□□□□ -0.69
SPTAN1-202ENST00000372731 USHBP1Q8N6Y0 703 aa10.72□□□□□ -0.69
SPTAN1-202ENST00000372731 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.72□□□□□ -0.69
SPTAN1-202ENST00000372731 SRCIN1Q9C0H9 1055 aa10.72□□□□□ -0.69
SPTAN1-202ENST00000372731 A0A087WZG4 1122 aa10.72□□□□□ -0.69
SPTAN1-202ENST00000372731 ZC3H6P61129 1189 aaKnown RBP10.72□□□□□ -0.69
SPTAN1-202ENST00000372731 TWISTNBQ3B726 338 aaPredicted RBP10.72□□□□□ -0.69
SPTAN1-202ENST00000372731 STXBP4Q6ZWJ1 553 aa10.72□□□□□ -0.69
SPTAN1-202ENST00000372731 CCDC117Q8IWD4 279 aaPredicted RBP10.72□□□□□ -0.69
SPTAN1-202ENST00000372731 SNAPC4Q5SXM2 1469 aa10.72□□□□□ -0.69
SPTAN1-202ENST00000372731 KIF4AO95239 1232 aa10.71□□□□□ -0.69
SPTAN1-202ENST00000372731 SYNJ1O43426 1573 aa10.71□□□□□ -0.69
SPTAN1-202ENST00000372731 EXOC5O00471 708 aa10.71□□□□□ -0.69
SPTAN1-202ENST00000372731 SAMM50Q9Y512 469 aa10.71□□□□□ -0.69
SPTAN1-202ENST00000372731 MINDY4BA8MYZ0 360 aa10.71□□□□□ -0.69
SPTAN1-202ENST00000372731 LARP1Q6PKG0 1096 aaKnown RBP10.71□□□□□ -0.69
SPTAN1-202ENST00000372731 DDX46Q7L014 1031 aaKnown RBP10.71□□□□□ -0.69
SPTAN1-202ENST00000372731 SLU7O95391 586 aaKnown RBP10.71□□□□□ -0.7
SPTAN1-202ENST00000372731 KIF20AO95235 890 aa10.71□□□□□ -0.7
SPTAN1-202ENST00000372731 CCDC184Q52MB2 194 aa10.7□□□□□ -0.7
SPTAN1-202ENST00000372731 MPRIPQ6WCQ1 1025 aa10.7□□□□□ -0.7
SPTAN1-202ENST00000372731 ARAP1Q96P48 1450 aa10.7□□□□□ -0.7
SPTAN1-202ENST00000372731 GOLGA6L10A0A0M3HER8 536 aa10.7□□□□□ -0.7
SPTAN1-202ENST00000372731 TOM1O60784 492 aa10.7□□□□□ -0.7
SPTAN1-202ENST00000372731 LMAN1P49257 510 aa10.7□□□□□ -0.7
SPTAN1-202ENST00000372731 KRT32Q14532 448 aa10.7□□□□□ -0.7
SPTAN1-202ENST00000372731 GSE1Q14687 1217 aa10.7□□□□□ -0.7
SPTAN1-202ENST00000372731 OGFOD1Q8N543 542 aa10.7□□□□□ -0.7
SPTAN1-202ENST00000372731 CCDC196A0A1B0GTZ2 297 aa10.7□□□□□ -0.7
SPTAN1-202ENST00000372731 CBX1P83916 185 aa10.7□□□□□ -0.7
SPTAN1-202ENST00000372731 MAP3K12Q12852 859 aa10.7□□□□□ -0.7
SPTAN1-202ENST00000372731 WAPLQ7Z5K2 1190 aa10.7□□□□□ -0.7
SPTAN1-202ENST00000372731 PDZRN3Q9UPQ7 1066 aa10.7□□□□□ -0.7
SPTAN1-202ENST00000372731 FKBP15Q5T1M5 1219 aa10.7□□□□□ -0.7
SPTAN1-202ENST00000372731 CTNNBL1Q8WYA6 563 aaPredicted RBP10.7□□□□□ -0.7
SPTAN1-202ENST00000372731 LRRFIP2Q9Y608 721 aaKnown RBP10.7□□□□□ -0.7
SPTAN1-202ENST00000372731 BAG3O95817 575 aa10.69□□□□□ -0.7
SPTAN1-202ENST00000372731 BICD1Q96G01 975 aa10.69□□□□□ -0.7
SPTAN1-202ENST00000372731 CEP63Q96MT8 703 aa10.69□□□□□ -0.7
SPTAN1-202ENST00000372731 CASKIN1Q8WXD9 1431 aa10.69□□□□□ -0.7
SPTAN1-202ENST00000372731 GRIN2BQ13224 1484 aa10.69□□□□□ -0.7
SPTAN1-202ENST00000372731 SPTY2D1Q68D10 685 aaPredicted RBP10.69□□□□□ -0.7
SPTAN1-202ENST00000372731 IQCA1Q86XH1 822 aa10.69□□□□□ -0.7
SPTAN1-202ENST00000372731 CKAP2LQ8IYA6 745 aa10.69□□□□□ -0.7
SPTAN1-202ENST00000372731 PHAXQ9H814 394 aaKnown RBP10.69□□□□□ -0.7
SPTAN1-202ENST00000372731 CTCFLQ8NI51 663 aaPredicted RBP10.69□□□□□ -0.7
SPTAN1-202ENST00000372731 ERBINQ96RT1 1412 aa10.69□□□□□ -0.7
SPTAN1-202ENST00000372731 CCDC12Q8WUD4 166 aaPredicted RBP10.69□□□□□ -0.7
SPTAN1-202ENST00000372731 EIF3JO75822 258 aaKnown RBP10.69□□□□□ -0.7
SPTAN1-202ENST00000372731 RNF214Q8ND24 703 aa10.69□□□□□ -0.7
SPTAN1-202ENST00000372731 CFAP45Q9UL16 551 aa10.69□□□□□ -0.7
SPTAN1-202ENST00000372731 PLEKHH2Q8IVE3 1493 aa10.69□□□□□ -0.7
SPTAN1-202ENST00000372731 GSTTP1A0A1W2PQM5 241 aa10.68□□□□□ -0.7
SPTAN1-202ENST00000372731 NAPBQ9H115 298 aa10.68□□□□□ -0.7
SPTAN1-202ENST00000372731 AKNAQ7Z591 1439 aa10.68□□□□□ -0.7
SPTAN1-202ENST00000372731 GSTO1P78417 241 aa10.68□□□□□ -0.7
SPTAN1-202ENST00000372731 IFIT5Q13325 482 aaKnown RBP10.68□□□□□ -0.7
SPTAN1-202ENST00000372731 C9orf84Q5VXU9 1444 aa10.68□□□□□ -0.7
SPTAN1-202ENST00000372731 SYCP3Q8IZU3 236 aa10.68□□□□□ -0.7
SPTAN1-202ENST00000372731 GNAT3A8MTJ3 354 aa10.68□□□□□ -0.7
SPTAN1-202ENST00000372731 PPP4R3BQ5MIZ7 849 aa10.68□□□□□ -0.7
SPTAN1-202ENST00000372731 DYDC1Q8WWB3 177 aa10.68□□□□□ -0.7
SPTAN1-202ENST00000372731 TSPY26PQ9H489 355 aa10.68□□□□□ -0.7
SPTAN1-202ENST00000372731 CDK13Q14004 1512 aaKnown RBP10.68□□□□□ -0.7
SPTAN1-202ENST00000372731 ZBTB24O43167 697 aaPredicted RBP10.68□□□□□ -0.7
SPTAN1-202ENST00000372731 PTCD1O75127 700 aaKnown RBP10.68□□□□□ -0.7
SPTAN1-202ENST00000372731 LDHCP07864 332 aa10.68□□□□□ -0.7
SPTAN1-202ENST00000372731 SREK1Q8WXA9 508 aaKnown RBP10.68□□□□□ -0.7
SPTAN1-202ENST00000372731 CDC5LQ99459 802 aaKnown RBP10.68□□□□□ -0.7
SPTAN1-202ENST00000372731 THUMPD2Q9BTF0 503 aaKnown RBP10.68□□□□□ -0.7
SPTAN1-202ENST00000372731 TNMDQ9H2S6 317 aa10.68□□□□□ -0.7
SPTAN1-202ENST00000372731 LPXNO60711 386 aa10.67□□□□□ -0.7
SPTAN1-202ENST00000372731 ERLIN1O75477 346 aa10.67□□□□□ -0.7
SPTAN1-202ENST00000372731 UBAP1LF5GYI3 381 aa10.67□□□□□ -0.7
SPTAN1-202ENST00000372731 NEK4P51957 841 aa10.67□□□□□ -0.7
SPTAN1-202ENST00000372731 CACNA2D4Q7Z3S7 1137 aa10.67□□□□□ -0.7
SPTAN1-202ENST00000372731 CC2D2AQ9P2K1 1620 aa10.67□□□□□ -0.7
SPTAN1-202ENST00000372731 MBD3O95983 291 aa10.67□□□□□ -0.7
SPTAN1-202ENST00000372731 SPA17Q15506 151 aa10.67□□□□□ -0.7
SPTAN1-202ENST00000372731 MAP2K1Q02750 393 aaPredicted RBP10.67□□□□□ -0.7
SPTAN1-202ENST00000372731 SYNCQ9H7C4 482 aa10.67□□□□□ -0.7
SPTAN1-202ENST00000372731 SLC52A1Q9NWF4 448 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms