RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 XIRP1Q702N8 1843 aaKnown RBP22.38■■□□□ 1.17
CTSA-204ENST00000372484 KDM3BQ7LBC6 1761 aa22.38■■□□□ 1.17
CTSA-204ENST00000372484 HDGFL1Q5TGJ6 251 aa22.38■■□□□ 1.17
CTSA-204ENST00000372484 PXDNQ92626 1479 aa22.38■■□□□ 1.17
CTSA-204ENST00000372484 TNS3Q68CZ2 1445 aa22.38■■□□□ 1.17
CTSA-204ENST00000372484 SLC4A3P48751 1232 aa22.37■■□□□ 1.17
CTSA-204ENST00000372484 CEP85Q6P2H3 762 aa22.37■■□□□ 1.17
CTSA-204ENST00000372484 DCTPP1Q9H773 170 aa22.37■■□□□ 1.17
CTSA-204ENST00000372484 BTBD11A6QL63 1104 aa22.36■■□□□ 1.17
CTSA-204ENST00000372484 EIF4A1P60842 406 aaKnown RBP22.36■■□□□ 1.17
CTSA-204ENST00000372484 LMTK3Q96Q04 1460 aa22.36■■□□□ 1.17
CTSA-204ENST00000372484 RNMTO43148 476 aaKnown RBP22.36■■□□□ 1.17
CTSA-204ENST00000372484 CABLES1Q8TDN4 633 aa22.36■■□□□ 1.17
CTSA-204ENST00000372484 STRCQ7RTU9 1775 aa22.36■■□□□ 1.17
CTSA-204ENST00000372484 NBR1Q14596 966 aa22.35■■□□□ 1.17
CTSA-204ENST00000372484 TBC1D32Q96NH3 1257 aa22.35■■□□□ 1.17
CTSA-204ENST00000372484 NLRP2Q9NX02 1062 aa22.34■■□□□ 1.17
CTSA-204ENST00000372484 OVOS2A0A0G2JMS6 1433 aa22.33■■□□□ 1.17
CTSA-204ENST00000372484 KDM4FA0A1W2PPD8 638 aa22.33■■□□□ 1.17
CTSA-204ENST00000372484 HOXB7P09629 217 aa22.33■■□□□ 1.17
CTSA-204ENST00000372484 BMP2KLQ5H9B9 411 aa22.33■■□□□ 1.17
CTSA-204ENST00000372484 SPATA31A3Q5VYP0 1347 aa22.33■■□□□ 1.16
CTSA-204ENST00000372484 KCNQ3O43525 872 aa22.33■■□□□ 1.16
CTSA-204ENST00000372484 EIF2S2P20042 333 aaKnown RBP22.33■■□□□ 1.16
CTSA-204ENST00000372484 RAPGEF4Q8WZA2 1011 aa22.32■■□□□ 1.16
CTSA-204ENST00000372484 CHMP4AQ9BY43 222 aa22.32■■□□□ 1.16
CTSA-204ENST00000372484 COL18A1P39060 1754 aa22.32■■□□□ 1.16
CTSA-204ENST00000372484 MFAP1P55081 439 aaKnown RBP22.31■■□□□ 1.16
CTSA-204ENST00000372484 CRYBG1Q9Y4K1 1723 aa22.3■■□□□ 1.16
CTSA-204ENST00000372484 HMMRO75330 724 aa22.3■■□□□ 1.16
CTSA-204ENST00000372484 BRINP3Q76B58 766 aa22.3■■□□□ 1.16
CTSA-204ENST00000372484 GNAI2P04899 355 aa22.3■■□□□ 1.16
CTSA-204ENST00000372484 CSB-PGBD3P0DP91 1061 aa22.3■■□□□ 1.16
CTSA-204ENST00000372484 PHAXQ9H814 394 aaKnown RBP22.3■■□□□ 1.16
CTSA-204ENST00000372484 N4BP2Q86UW6 1770 aaPredicted RBP22.29■■□□□ 1.16
CTSA-204ENST00000372484 GNAI3P08754 354 aa22.29■■□□□ 1.16
CTSA-204ENST00000372484 CHRNA2Q15822 529 aa22.29■■□□□ 1.16
CTSA-204ENST00000372484 PXDNLA1KZ92 1463 aa22.29■■□□□ 1.16
CTSA-204ENST00000372484 CHPF2Q9P2E5 772 aa22.28■■□□□ 1.16
CTSA-204ENST00000372484 TATP17735 454 aaPredicted RBP22.27■■□□□ 1.16
CTSA-204ENST00000372484 BCL11AQ9H165 835 aa22.27■■□□□ 1.16
CTSA-204ENST00000372484 SIPA1L3O60292 1781 aaPredicted RBP22.27■■□□□ 1.16
CTSA-204ENST00000372484 ZNF335Q9H4Z2 1342 aaPredicted RBP22.27■■□□□ 1.16
CTSA-204ENST00000372484 C22orf23Q9BZE7 217 aa22.27■■□□□ 1.15
CTSA-204ENST00000372484 ABCC6O95255 1503 aa22.26■■□□□ 1.15
CTSA-204ENST00000372484 BECN1Q14457 450 aa22.26■■□□□ 1.15
CTSA-204ENST00000372484 ADAMTS7Q9UKP4 1686 aa22.26■■□□□ 1.15
CTSA-204ENST00000372484 PLEKHM2Q8IWE5 1019 aa22.25■■□□□ 1.15
CTSA-204ENST00000372484 APBB1O00213 710 aa22.25■■□□□ 1.15
CTSA-204ENST00000372484 SPG7Q9UQ90 795 aa22.25■■□□□ 1.15
CTSA-204ENST00000372484 CPDO75976 1380 aa22.24■■□□□ 1.15
CTSA-204ENST00000372484 SLAIN2Q9P270 581 aa22.24■■□□□ 1.15
CTSA-204ENST00000372484 MEGF6O75095 1541 aa22.23■■□□□ 1.15
CTSA-204ENST00000372484 C16orf71Q8IYS4 520 aaPredicted RBP22.23■■□□□ 1.15
CTSA-204ENST00000372484 GIGYF1O75420 1035 aaPredicted RBP22.22■■□□□ 1.15
CTSA-204ENST00000372484 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.22■■□□□ 1.15
CTSA-204ENST00000372484 SCN11AQ9UI33 1791 aa22.22■■□□□ 1.15
CTSA-204ENST00000372484 USP44Q9H0E7 712 aa22.22■■□□□ 1.15
CTSA-204ENST00000372484 DBF4Q9UBU7 674 aaPredicted RBP22.22■■□□□ 1.15
CTSA-204ENST00000372484 SMARCA5O60264 1052 aaPredicted RBP22.21■■□□□ 1.15
CTSA-204ENST00000372484 HEG1Q9ULI3 1381 aa22.21■■□□□ 1.15
CTSA-204ENST00000372484 ANXA1P04083 346 aa22.21■■□□□ 1.15
CTSA-204ENST00000372484 PHKG2P15735 406 aa22.21■■□□□ 1.15
CTSA-204ENST00000372484 SRCIN1Q9C0H9 1055 aa22.21■■□□□ 1.15
CTSA-204ENST00000372484 UBTFL1P0CB47 393 aaPredicted RBP22.2■■□□□ 1.14
CTSA-204ENST00000372484 GSPT1P15170 499 aaKnown RBP22.2■■□□□ 1.14
CTSA-204ENST00000372484 RTL5Q5HYW3 569 aaPredicted RBP22.2■■□□□ 1.14
CTSA-204ENST00000372484 LRRFIP2Q9Y608 721 aaKnown RBP22.2■■□□□ 1.14
CTSA-204ENST00000372484 PI4KAP2A4QPH2 592 aa22.19■■□□□ 1.14
CTSA-204ENST00000372484 TBC1D9Q6ZT07 1266 aa22.19■■□□□ 1.14
CTSA-204ENST00000372484 IFNL2Q8IZJ0 200 aa22.19■■□□□ 1.14
CTSA-204ENST00000372484 PI4KAP1Q8N8J0 262 aa22.19■■□□□ 1.14
CTSA-204ENST00000372484 KDM6AO15550 1401 aaPredicted RBP22.19■■□□□ 1.14
CTSA-204ENST00000372484 ATP8B2P98198 1209 aa22.19■■□□□ 1.14
CTSA-204ENST00000372484 TTC22Q5TAA0 569 aa22.19■■□□□ 1.14
CTSA-204ENST00000372484 OTUD7AQ8TE49 926 aaPredicted RBP22.19■■□□□ 1.14
CTSA-204ENST00000372484 DNAAF4Q8WXU2 420 aa22.19■■□□□ 1.14
CTSA-204ENST00000372484 SLC52A2Q9HAB3 445 aa22.19■■□□□ 1.14
CTSA-204ENST00000372484 SOS2Q07890 1332 aaPredicted RBP22.19■■□□□ 1.14
CTSA-204ENST00000372484 PLEKHG2Q9H7P9 1386 aa22.18■■□□□ 1.14
CTSA-204ENST00000372484 PNMA6EA0A0J9YXQ4 647 aa22.18■■□□□ 1.14
CTSA-204ENST00000372484 EXOC6BQ9Y2D4 811 aa22.18■■□□□ 1.14
CTSA-204ENST00000372484 PRAMEF22A3QJZ6 481 aa22.17■■□□□ 1.14
CTSA-204ENST00000372484 CDC45O75419 566 aa22.17■■□□□ 1.14
CTSA-204ENST00000372484 PRDM11Q9NQV5 511 aa22.17■■□□□ 1.14
CTSA-204ENST00000372484 ZNF790Q6PG37 636 aa22.16■■□□□ 1.14
CTSA-204ENST00000372484 NFATC2IPQ8NCF5 419 aa22.16■■□□□ 1.14
CTSA-204ENST00000372484 BEND3Q5T5X7 828 aa22.16■■□□□ 1.14
CTSA-204ENST00000372484 ADCY9O60503 1353 aa22.15■■□□□ 1.14
CTSA-204ENST00000372484 SLC39A6Q13433 755 aa22.15■■□□□ 1.14
CTSA-204ENST00000372484 PKD1L3Q7Z443 1732 aa22.15■■□□□ 1.14
CTSA-204ENST00000372484 RBM25P49756 843 aaKnown RBP22.15■■□□□ 1.14
CTSA-204ENST00000372484 PROSER3Q2NL68 480 aa22.15■■□□□ 1.14
CTSA-204ENST00000372484 TBC1D2Q9BYX2 928 aa22.15■■□□□ 1.14
CTSA-204ENST00000372484 CYP27B1O15528 508 aa22.14■■□□□ 1.13
CTSA-204ENST00000372484 DCAF5Q96JK2 942 aa22.14■■□□□ 1.13
CTSA-204ENST00000372484 LRRCC1Q9C099 1032 aa22.13■■□□□ 1.13
CTSA-204ENST00000372484 HYPKQ9NX55 129 aa22.13■■□□□ 1.13
CTSA-204ENST00000372484 USP35Q9P2H5 1018 aa22.12■■□□□ 1.13
CTSA-204ENST00000372484 WDR17Q8IZU2 1322 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms