RNA–Protein interactions for RNA: ENST00000371941.3

PREX1-201, Transcript of phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREX1, Length 6,636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREX1-201ENST00000371941 ANKRD20A12PQ8NF67 263 aa15.98■□□□□ 0.15
PREX1-201ENST00000371941 LRRC2Q9BYS8 371 aa15.98■□□□□ 0.15
PREX1-201ENST00000371941 FBXO3Q9UK99 471 aa15.98■□□□□ 0.15
PREX1-201ENST00000371941 NUP62CLQ9H1M0 184 aa15.98■□□□□ 0.15
PREX1-201ENST00000371941 LETM1O95202 739 aaPredicted RBP15.98■□□□□ 0.15
PREX1-201ENST00000371941 CEP89Q96ST8 783 aa15.98■□□□□ 0.15
PREX1-201ENST00000371941 DHX37Q8IY37 1157 aaKnown RBP15.98■□□□□ 0.15
PREX1-201ENST00000371941 SDSP20132 328 aa15.97■□□□□ 0.15
PREX1-201ENST00000371941 DHX29Q7Z478 1369 aaKnown RBP15.97■□□□□ 0.15
PREX1-201ENST00000371941 PDCP20941 246 aa15.97■□□□□ 0.15
PREX1-201ENST00000371941 KIF1BPQ96EK5 621 aa15.97■□□□□ 0.15
PREX1-201ENST00000371941 IPO7O95373 1038 aaKnown RBP15.97■□□□□ 0.15
PREX1-201ENST00000371941 PHACTR3Q96KR7 559 aa15.97■□□□□ 0.15
PREX1-201ENST00000371941 SNRKQ9NRH2 765 aa15.97■□□□□ 0.15
PREX1-201ENST00000371941 MAPK8IP2Q13387 824 aaPredicted RBP15.97■□□□□ 0.15
PREX1-201ENST00000371941 NUCB1Q02818 461 aa15.97■□□□□ 0.15
PREX1-201ENST00000371941 ZNF396Q96N95 335 aaPredicted RBP15.97■□□□□ 0.15
PREX1-201ENST00000371941 ACEP12821 1306 aa15.97■□□□□ 0.15
PREX1-201ENST00000371941 PRDM11Q9NQV5 511 aa15.96■□□□□ 0.15
PREX1-201ENST00000371941 CCDC69A6NI79 296 aa15.96■□□□□ 0.15
PREX1-201ENST00000371941 PI4KAP2A4QPH2 592 aa15.96■□□□□ 0.15
PREX1-201ENST00000371941 PI4KAP1Q8N8J0 262 aa15.96■□□□□ 0.15
PREX1-201ENST00000371941 PARD3Q8TEW0 1356 aa15.96■□□□□ 0.15
PREX1-201ENST00000371941 TCEAL9Q9UHQ7 104 aa15.96■□□□□ 0.14
PREX1-201ENST00000371941 GPTP24298 496 aa15.95■□□□□ 0.14
PREX1-201ENST00000371941 HAND2P61296 217 aa15.95■□□□□ 0.14
PREX1-201ENST00000371941 PPP1R42Q7Z4L9 355 aa15.95■□□□□ 0.14
PREX1-201ENST00000371941 RAB11FIP3O75154 756 aa15.95■□□□□ 0.14
PREX1-201ENST00000371941 BAG4O95429 457 aaKnown RBP15.95■□□□□ 0.14
PREX1-201ENST00000371941 PIP4K2BP78356 416 aa15.95■□□□□ 0.14
PREX1-201ENST00000371941 TTC22Q5TAA0 569 aa15.95■□□□□ 0.14
PREX1-201ENST00000371941 ABCF2Q9UG63 623 aa15.95■□□□□ 0.14
PREX1-201ENST00000371941 CAGE1Q8TC20 777 aa15.95■□□□□ 0.14
PREX1-201ENST00000371941 ZBTB3Q9H5J0 574 aa15.95■□□□□ 0.14
PREX1-201ENST00000371941 CHRNA2Q15822 529 aa15.95■□□□□ 0.14
PREX1-201ENST00000371941 MPHOSPH8Q99549 860 aa15.94■□□□□ 0.14
PREX1-201ENST00000371941 TRAPPC8Q9Y2L5 1435 aa15.94■□□□□ 0.14
PREX1-201ENST00000371941 GJB2P29033 226 aa15.94■□□□□ 0.14
PREX1-201ENST00000371941 ITSN2Q9NZM3 1697 aa15.94■□□□□ 0.14
PREX1-201ENST00000371941 TDO2P48775 406 aa15.94■□□□□ 0.14
PREX1-201ENST00000371941 SLC39A6Q13433 755 aa15.94■□□□□ 0.14
PREX1-201ENST00000371941 BRMS1Q9HCU9 246 aa15.94■□□□□ 0.14
PREX1-201ENST00000371941 TRMT1Q9NXH9 659 aaKnown RBP15.94■□□□□ 0.14
PREX1-201ENST00000371941 KDM5BQ9UGL1 1544 aa15.93■□□□□ 0.14
PREX1-201ENST00000371941 SART3Q15020 963 aaKnown RBP15.93■□□□□ 0.14
PREX1-201ENST00000371941 ANKLE2Q86XL3 938 aa15.93■□□□□ 0.14
PREX1-201ENST00000371941 DNAAF4Q8WXU2 420 aa15.93■□□□□ 0.14
PREX1-201ENST00000371941 BIN1O00499 593 aa15.93■□□□□ 0.14
PREX1-201ENST00000371941 CHPF2Q9P2E5 772 aa15.93■□□□□ 0.14
PREX1-201ENST00000371941 CIZ1Q9ULV3 898 aaPredicted RBP15.93■□□□□ 0.14
PREX1-201ENST00000371941 ZHX3Q9H4I2 956 aa15.93■□□□□ 0.14
PREX1-201ENST00000371941 PA2G4Q9UQ80 394 aaKnown RBP15.93■□□□□ 0.14
PREX1-201ENST00000371941 CCDC47Q96A33 483 aaKnown RBP15.93■□□□□ 0.14
PREX1-201ENST00000371941 CEP126Q9P2H0 1117 aa15.92■□□□□ 0.14
PREX1-201ENST00000371941 KIF21AQ7Z4S6 1674 aa15.92■□□□□ 0.14
PREX1-201ENST00000371941 ANKRD1Q15327 319 aa15.92■□□□□ 0.14
PREX1-201ENST00000371941 METTL24Q5JXM2 366 aa15.92■□□□□ 0.14
PREX1-201ENST00000371941 GIMAP6Q6P9H5 292 aa15.92■□□□□ 0.14
PREX1-201ENST00000371941 MINDY4BA8MYZ0 360 aa15.92■□□□□ 0.14
PREX1-201ENST00000371941 CBX1P83916 185 aa15.92■□□□□ 0.14
PREX1-201ENST00000371941 ZGPATQ8N5A5 531 aaKnown RBP15.91■□□□□ 0.14
PREX1-201ENST00000371941 MRPL50Q8N5N7 158 aaKnown RBP15.91■□□□□ 0.14
PREX1-201ENST00000371941 PRM3Q9NNZ6 103 aa15.91■□□□□ 0.14
PREX1-201ENST00000371941 OTUD7AQ8TE49 926 aaPredicted RBP15.91■□□□□ 0.14
PREX1-201ENST00000371941 ZSCAN23Q3MJ62 389 aa15.91■□□□□ 0.14
PREX1-201ENST00000371941 RAI14Q9P0K7 980 aa15.91■□□□□ 0.14
PREX1-201ENST00000371941 LRRC59Q96AG4 307 aaKnown RBP15.91■□□□□ 0.14
PREX1-201ENST00000371941 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.91■□□□□ 0.14
PREX1-201ENST00000371941 XBP1P17861 261 aa15.91■□□□□ 0.14
PREX1-201ENST00000371941 MAP3K11Q16584 847 aa15.91■□□□□ 0.14
PREX1-201ENST00000371941 CTDP1Q9Y5B0 961 aaPredicted RBP15.91■□□□□ 0.14
PREX1-201ENST00000371941 ERICH4A6NGS2 130 aa15.9■□□□□ 0.14
PREX1-201ENST00000371941 GOLIM4O00461 696 aa15.9■□□□□ 0.14
PREX1-201ENST00000371941 PER1O15534 1290 aaPredicted RBP15.9■□□□□ 0.14
PREX1-201ENST00000371941 EPS15P42566 896 aa15.9■□□□□ 0.14
PREX1-201ENST00000371941 HSP90AB3PQ58FF7 597 aa15.9■□□□□ 0.14
PREX1-201ENST00000371941 CNPY2Q9Y2B0 182 aa15.9■□□□□ 0.14
PREX1-201ENST00000371941 CCDC70Q6NSX1 233 aa15.9■□□□□ 0.14
PREX1-201ENST00000371941 LRP2BPQ9P2M1 347 aa15.9■□□□□ 0.14
PREX1-201ENST00000371941 GLRX3O76003 335 aaKnown RBP15.9■□□□□ 0.14
PREX1-201ENST00000371941 GPS2Q13227 327 aa15.9■□□□□ 0.14
PREX1-201ENST00000371941 PZPP20742 1482 aa15.9■□□□□ 0.14
PREX1-201ENST00000371941 KLHL10Q6JEL2 608 aa15.9■□□□□ 0.14
PREX1-201ENST00000371941 BMP2KLQ5H9B9 411 aa15.9■□□□□ 0.14
PREX1-201ENST00000371941 TEX35Q5T0J7 233 aa15.9■□□□□ 0.14
PREX1-201ENST00000371941 XRCC6P12956 609 aaKnown RBP eCLIP15.89■□□□□ 0.14
PREX1-201ENST00000371941 ZSCAN30Q86W11 494 aa15.89■□□□□ 0.14
PREX1-201ENST00000371941 KDM6BO15054 1643 aa15.89■□□□□ 0.13
PREX1-201ENST00000371941 POLR3DP05423 398 aaPredicted RBP15.89■□□□□ 0.13
PREX1-201ENST00000371941 IFIT1P09914 478 aaKnown RBP15.89■□□□□ 0.13
PREX1-201ENST00000371941 DHX8Q14562 1220 aaKnown RBP15.89■□□□□ 0.13
PREX1-201ENST00000371941 TMX3Q96JJ7 454 aa15.89■□□□□ 0.13
PREX1-201ENST00000371941 A0A087WZG4 1122 aa15.89■□□□□ 0.13
PREX1-201ENST00000371941 CPA1P15085 419 aa15.89■□□□□ 0.13
PREX1-201ENST00000371941 HSP90AA4PQ58FG1 418 aa15.89■□□□□ 0.13
PREX1-201ENST00000371941 POLKQ9UBT6 870 aa15.89■□□□□ 0.13
PREX1-201ENST00000371941 CHST3Q7LGC8 479 aa15.88■□□□□ 0.13
PREX1-201ENST00000371941 WDR62O43379 1518 aa15.88■□□□□ 0.13
PREX1-201ENST00000371941 UBE3BQ7Z3V4 1068 aa15.88■□□□□ 0.13
PREX1-201ENST00000371941 EIF4A2Q14240 407 aaKnown RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 240 ms