RNA–Protein interactions for RNA: ENST00000369459.6

BRCC3-203, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5 BASIC

Gene BRCC3, Length 2,641 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-203ENST00000369459 PMFBP1Q8TBY8 1022 aa9.39□□□□□ -0.91
BRCC3-203ENST00000369459 POLKQ9UBT6 870 aa9.39□□□□□ -0.91
BRCC3-203ENST00000369459 USP19O94966 1318 aa9.39□□□□□ -0.91
BRCC3-203ENST00000369459 SSFA2P28290 1259 aa9.38□□□□□ -0.91
BRCC3-203ENST00000369459 MTA3Q9BTC8 594 aa9.38□□□□□ -0.91
BRCC3-203ENST00000369459 KCNH5Q8NCM2 988 aa9.38□□□□□ -0.91
BRCC3-203ENST00000369459 ARHGEF1Q92888 912 aaKnown RBP9.38□□□□□ -0.91
BRCC3-203ENST00000369459 COL22A1Q8NFW1 1626 aaPredicted RBP9.38□□□□□ -0.91
BRCC3-203ENST00000369459 TNS3Q68CZ2 1445 aa9.38□□□□□ -0.91
BRCC3-203ENST00000369459 ARHGEF10O15013 1369 aa9.38□□□□□ -0.91
BRCC3-203ENST00000369459 DNTTIP2Q5QJE6 756 aaKnown RBP9.37□□□□□ -0.91
BRCC3-203ENST00000369459 TSPAN18Q96SJ8 248 aa9.37□□□□□ -0.91
BRCC3-203ENST00000369459 TRAIPQ9BWF2 469 aa9.37□□□□□ -0.91
BRCC3-203ENST00000369459 ADAMTS8Q9UP79 889 aa9.37□□□□□ -0.91
BRCC3-203ENST00000369459 FLT4P35916 1363 aa9.37□□□□□ -0.91
BRCC3-203ENST00000369459 DIAPH1O60610 1272 aaKnown RBP9.37□□□□□ -0.91
BRCC3-203ENST00000369459 UTP14CQ5TAP6 766 aaKnown RBP9.37□□□□□ -0.91
BRCC3-203ENST00000369459 SDR16C5Q8N3Y7 309 aa9.37□□□□□ -0.91
BRCC3-203ENST00000369459 NOP58Q9Y2X3 529 aaKnown RBP9.37□□□□□ -0.91
BRCC3-203ENST00000369459 PLEKHG2Q9H7P9 1386 aa9.37□□□□□ -0.91
BRCC3-203ENST00000369459 NUTM2FA1L443 756 aa9.36□□□□□ -0.91
BRCC3-203ENST00000369459 CHMP4CQ96CF2 233 aa9.36□□□□□ -0.91
BRCC3-203ENST00000369459 ZBTB12Q9Y330 459 aaPredicted RBP9.36□□□□□ -0.91
BRCC3-203ENST00000369459 COL18A1P39060 1754 aa9.36□□□□□ -0.91
BRCC3-203ENST00000369459 MAP2K1Q02750 393 aaPredicted RBP9.36□□□□□ -0.91
BRCC3-203ENST00000369459 RUNDC1Q96C34 613 aa9.36□□□□□ -0.91
BRCC3-203ENST00000369459 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.36□□□□□ -0.912e-6■■■■■ 96.1
BRCC3-203ENST00000369459 ROBO1Q9Y6N7 1651 aa9.36□□□□□ -0.91
BRCC3-203ENST00000369459 GOLGA6CA6NDK9 693 aa9.35□□□□□ -0.91
BRCC3-203ENST00000369459 GOLGA6BA6NDN3 693 aa9.35□□□□□ -0.91
BRCC3-203ENST00000369459 DHX16O60231 1041 aaKnown RBP9.35□□□□□ -0.91
BRCC3-203ENST00000369459 GOLGA6DP0CG33 693 aa9.35□□□□□ -0.91
BRCC3-203ENST00000369459 SCP2P22307 547 aa9.35□□□□□ -0.91
BRCC3-203ENST00000369459 KRT28Q7Z3Y7 464 aa9.35□□□□□ -0.91
BRCC3-203ENST00000369459 ORAI2Q96SN7 254 aa9.35□□□□□ -0.91
BRCC3-203ENST00000369459 GOLGA6AQ9NYA3 693 aa9.35□□□□□ -0.91
BRCC3-203ENST00000369459 DLG5Q8TDM6 1919 aa9.35□□□□□ -0.91
BRCC3-203ENST00000369459 FCHSD2O94868 740 aa9.35□□□□□ -0.91
BRCC3-203ENST00000369459 EP400NLQ6ZTU2 488 aa9.35□□□□□ -0.91
BRCC3-203ENST00000369459 ABTB2Q8N961 1025 aa9.35□□□□□ -0.91
BRCC3-203ENST00000369459 ATL2Q8NHH9 583 aa9.35□□□□□ -0.91
BRCC3-203ENST00000369459 GEMIN8Q9NWZ8 242 aaKnown RBP9.35□□□□□ -0.91
BRCC3-203ENST00000369459 LMO7Q8WWI1 1683 aa9.35□□□□□ -0.91
BRCC3-203ENST00000369459 RIOK3O14730 519 aaKnown RBP9.35□□□□□ -0.91
BRCC3-203ENST00000369459 SOS2Q07890 1332 aaPredicted RBP9.34□□□□□ -0.91
BRCC3-203ENST00000369459 IL13P35225 146 aa9.34□□□□□ -0.91
BRCC3-203ENST00000369459 NLRP6P59044 892 aa9.34□□□□□ -0.91
BRCC3-203ENST00000369459 NBPF10Q6P3W6 841 aaKnown RBP9.34□□□□□ -0.91
BRCC3-203ENST00000369459 SLAIN2Q9P270 581 aa9.34□□□□□ -0.91
BRCC3-203ENST00000369459 GOLIM4O00461 696 aa9.34□□□□□ -0.91
BRCC3-203ENST00000369459 TNNT2P45379 298 aaPredicted RBP9.34□□□□□ -0.91
BRCC3-203ENST00000369459 YY1AP1Q9H869 796 aa9.34□□□□□ -0.91
BRCC3-203ENST00000369459 ZNF521Q96K83 1311 aa9.33□□□□□ -0.92
BRCC3-203ENST00000369459 NCAPD2Q15021 1401 aa9.33□□□□□ -0.92
BRCC3-203ENST00000369459 NBPF6Q5VWK0 638 aa9.33□□□□□ -0.92
BRCC3-203ENST00000369459 BRINP3Q76B58 766 aa9.33□□□□□ -0.92
BRCC3-203ENST00000369459 DDX46Q7L014 1031 aaKnown RBP9.33□□□□□ -0.92
BRCC3-203ENST00000369459 GET4Q7L5D6 327 aaPredicted RBP9.33□□□□□ -0.92
BRCC3-203ENST00000369459 NBPF5PQ86XG9 351 aaPredicted RBP9.33□□□□□ -0.92
BRCC3-203ENST00000369459 ANKRD13AQ8IZ07 590 aa9.33□□□□□ -0.92
BRCC3-203ENST00000369459 RNF217Q8TC41 542 aa9.33□□□□□ -0.92
BRCC3-203ENST00000369459 RBM33Q96EV2 1170 aaKnown RBP9.33□□□□□ -0.92
BRCC3-203ENST00000369459 NBPF4Q96M43 638 aa9.33□□□□□ -0.92
BRCC3-203ENST00000369459 ZRANB1Q9UGI0 708 aa9.33□□□□□ -0.92
BRCC3-203ENST00000369459 SPATA31A3Q5VYP0 1347 aa9.33□□□□□ -0.92
BRCC3-203ENST00000369459 RGPD5Q99666 1765 aa9.33□□□□□ -0.92
BRCC3-203ENST00000369459 RHBDL3P58872 404 aa9.33□□□□□ -0.92
BRCC3-203ENST00000369459 GORABQ5T7V8 394 aa9.33□□□□□ -0.92
BRCC3-203ENST00000369459 BORCS6Q96GS4 357 aa9.33□□□□□ -0.92
BRCC3-203ENST00000369459 CPDO75976 1380 aa9.32□□□□□ -0.92
BRCC3-203ENST00000369459 PEX14O75381 377 aa9.32□□□□□ -0.92
BRCC3-203ENST00000369459 KRBA2Q6ZNG9 492 aa9.32□□□□□ -0.92
BRCC3-203ENST00000369459 MAP3K19Q56UN5 1328 aa9.32□□□□□ -0.92
BRCC3-203ENST00000369459 KDRP35968 1356 aa9.32□□□□□ -0.92
BRCC3-203ENST00000369459 FOXO3O43524 673 aa9.32□□□□□ -0.92
BRCC3-203ENST00000369459 PPFIA4O75335 1185 aa9.32□□□□□ -0.92
BRCC3-203ENST00000369459 BANK1Q8NDB2 785 aa9.32□□□□□ -0.92
BRCC3-203ENST00000369459 SPATA32Q96LK8 384 aa9.32□□□□□ -0.92
BRCC3-203ENST00000369459 PLEKHF1Q96S99 279 aa9.32□□□□□ -0.92
BRCC3-203ENST00000369459 EMILIN1Q9Y6C2 1016 aa9.32□□□□□ -0.92
BRCC3-203ENST00000369459 PHLPP1O60346 1717 aa9.31□□□□□ -0.92
BRCC3-203ENST00000369459 CT47B1P0C2W7 299 aaPredicted RBP9.31□□□□□ -0.92
BRCC3-203ENST00000369459 MTA1Q13330 715 aa9.31□□□□□ -0.92
BRCC3-203ENST00000369459 PAK3O75914 559 aaPredicted RBP9.31□□□□□ -0.92
BRCC3-203ENST00000369459 ANKRD23Q86SG2 305 aa9.31□□□□□ -0.92
BRCC3-203ENST00000369459 IP6K1Q92551 441 aa9.31□□□□□ -0.92
BRCC3-203ENST00000369459 U2AF1L5P0DN76 240 aaPredicted RBP9.3□□□□□ -0.92
BRCC3-203ENST00000369459 U2AF1Q01081 240 aaKnown RBP eCLIP9.3□□□□□ -0.92
BRCC3-203ENST00000369459 SLC20A2Q08357 652 aa9.3□□□□□ -0.92
BRCC3-203ENST00000369459 TAF3Q5VWG9 929 aa9.3□□□□□ -0.92
BRCC3-203ENST00000369459 WDR63Q8IWG1 891 aa9.3□□□□□ -0.92
BRCC3-203ENST00000369459 COL16A1Q07092 1604 aaPredicted RBP9.3□□□□□ -0.92
BRCC3-203ENST00000369459 RGPD2P0DJD1 1756 aa9.3□□□□□ -0.92
BRCC3-203ENST00000369459 NRDCO43847 1150 aa9.3□□□□□ -0.92
BRCC3-203ENST00000369459 IGSF1Q8N6C5 1336 aa9.3□□□□□ -0.92
BRCC3-203ENST00000369459 VIRMAQ69YN4 1812 aaKnown RBP9.29□□□□□ -0.92
BRCC3-203ENST00000369459 HOXC9P31274 260 aa9.29□□□□□ -0.92
BRCC3-203ENST00000369459 IRF5Q13568 498 aa9.29□□□□□ -0.92
BRCC3-203ENST00000369459 EIF4A2Q14240 407 aaKnown RBP9.29□□□□□ -0.92
BRCC3-203ENST00000369459 RRS1Q15050 365 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms