RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 MADDQ8WXG6 1647 aa10.18□□□□□ -0.78
PTPRK-206ENST00000368215 MAP3K4Q9Y6R4 1608 aa10.18□□□□□ -0.78
PTPRK-206ENST00000368215 PTCD1O75127 700 aaKnown RBP10.18□□□□□ -0.78
PTPRK-206ENST00000368215 CCDC85AQ96PX6 553 aaPredicted RBP10.18□□□□□ -0.78
PTPRK-206ENST00000368215 BOLA2Q9H3K6 86 aa10.18□□□□□ -0.78
PTPRK-206ENST00000368215 KIF3AQ9Y496 699 aa10.18□□□□□ -0.78
PTPRK-206ENST00000368215 KRT28Q7Z3Y7 464 aa10.17□□□□□ -0.78
PTPRK-206ENST00000368215 DBF4Q9UBU7 674 aaPredicted RBP10.17□□□□□ -0.78
PTPRK-206ENST00000368215 MAP3K2Q9Y2U5 619 aa10.17□□□□□ -0.78
PTPRK-206ENST00000368215 ANKRD24Q8TF21 1146 aa10.17□□□□□ -0.78
PTPRK-206ENST00000368215 CYP46A1Q9Y6A2 500 aa10.17□□□□□ -0.78
PTPRK-206ENST00000368215 SPHKAPQ2M3C7 1700 aa10.17□□□□□ -0.78
PTPRK-206ENST00000368215 ABCC3O15438 1527 aa10.17□□□□□ -0.78
PTPRK-206ENST00000368215 CHL1O00533 1208 aa10.17□□□□□ -0.78
PTPRK-206ENST00000368215 CHRNA2Q15822 529 aa10.17□□□□□ -0.78
PTPRK-206ENST00000368215 MYD88Q99836 296 aa10.17□□□□□ -0.78
PTPRK-206ENST00000368215 PHAXQ9H814 394 aaKnown RBP10.17□□□□□ -0.78
PTPRK-206ENST00000368215 MSH6P52701 1360 aa10.17□□□□□ -0.78
PTPRK-206ENST00000368215 CASTP20810 708 aaKnown RBP10.16□□□□□ -0.78
PTPRK-206ENST00000368215 AMOTQ4VCS5 1084 aa10.16□□□□□ -0.78
PTPRK-206ENST00000368215 MBD3O95983 291 aa10.16□□□□□ -0.78
PTPRK-206ENST00000368215 PSMA5P28066 241 aa10.16□□□□□ -0.78
PTPRK-206ENST00000368215 HOXC9P31274 260 aa10.16□□□□□ -0.78
PTPRK-206ENST00000368215 SLC39A6Q13433 755 aa10.16□□□□□ -0.78
PTPRK-206ENST00000368215 FAM43AQ8N2R8 423 aa10.16□□□□□ -0.78
PTPRK-206ENST00000368215 FBXW7Q969H0 707 aa10.16□□□□□ -0.78
PTPRK-206ENST00000368215 PRPF40BQ6NWY9 871 aaKnown RBP10.16□□□□□ -0.78
PTPRK-206ENST00000368215 RAB11FIP3O75154 756 aa10.16□□□□□ -0.78
PTPRK-206ENST00000368215 KDM4AO75164 1064 aa10.16□□□□□ -0.78
PTPRK-206ENST00000368215 GLRX3O76003 335 aaKnown RBP10.16□□□□□ -0.78
PTPRK-206ENST00000368215 PIK3R4Q99570 1358 aa10.16□□□□□ -0.78
PTPRK-206ENST00000368215 PIP4K2AP48426 406 aaPredicted RBP10.15□□□□□ -0.78
PTPRK-206ENST00000368215 RNF17Q9BXT8 1623 aaKnown RBP10.15□□□□□ -0.78
PTPRK-206ENST00000368215 ANO8Q9HCE9 1232 aaPredicted RBP10.15□□□□□ -0.78
PTPRK-206ENST00000368215 HECW2Q9P2P5 1572 aa10.15□□□□□ -0.78
PTPRK-206ENST00000368215 GDPD2Q9HCC8 539 aa10.15□□□□□ -0.78
PTPRK-206ENST00000368215 TBX22Q9Y458 520 aa10.15□□□□□ -0.78
PTPRK-206ENST00000368215 CPLX1O14810 134 aa10.15□□□□□ -0.78
PTPRK-206ENST00000368215 NRDCO43847 1150 aa10.15□□□□□ -0.78
PTPRK-206ENST00000368215 RHPN1Q8TCX5 695 aa10.15□□□□□ -0.78
PTPRK-206ENST00000368215 PDRG1Q9NUG6 133 aa10.15□□□□□ -0.78
PTPRK-206ENST00000368215 CEBPZQ03701 1054 aaKnown RBP10.15□□□□□ -0.79
PTPRK-206ENST00000368215 TMEM2Q9UHN6 1383 aa10.14□□□□□ -0.79
PTPRK-206ENST00000368215 WDR33Q9C0J8 1336 aaKnown RBP10.14□□□□□ -0.79
PTPRK-206ENST00000368215 BAG4O95429 457 aaKnown RBP10.14□□□□□ -0.79
PTPRK-206ENST00000368215 SYCE3A1L190 88 aa10.14□□□□□ -0.79
PTPRK-206ENST00000368215 HIP1O00291 1037 aa10.14□□□□□ -0.79
PTPRK-206ENST00000368215 ATP8B2P98198 1209 aa10.14□□□□□ -0.79
PTPRK-206ENST00000368215 CCDC83Q8IWF9 413 aa10.14□□□□□ -0.79
PTPRK-206ENST00000368215 ARAP3Q8WWN8 1544 aa10.14□□□□□ -0.79
PTPRK-206ENST00000368215 ATP5J2-PTCD1G3V325 749 aa10.14□□□□□ -0.79
PTPRK-206ENST00000368215 NCBP3Q53F19 620 aaKnown RBP10.14□□□□□ -0.79
PTPRK-206ENST00000368215 FERMT3Q86UX7 667 aa10.14□□□□□ -0.79
PTPRK-206ENST00000368215 PANK2Q9BZ23 570 aa10.14□□□□□ -0.79
PTPRK-206ENST00000368215 LARP1Q6PKG0 1096 aaKnown RBP10.13□□□□□ -0.79
PTPRK-206ENST00000368215 PRR36Q9H6K5 1346 aa10.13□□□□□ -0.79
PTPRK-206ENST00000368215 LRRFIP1Q32MZ4 808 aaKnown RBP10.13□□□□□ -0.79
PTPRK-206ENST00000368215 BLOC1S2Q6QNY1 142 aa10.13□□□□□ -0.79
PTPRK-206ENST00000368215 PA2G4Q9UQ80 394 aaKnown RBP10.13□□□□□ -0.79
PTPRK-206ENST00000368215 ABCA6Q8N139 1617 aa10.13□□□□□ -0.79
PTPRK-206ENST00000368215 BECN2A8MW95 431 aa10.13□□□□□ -0.79
PTPRK-206ENST00000368215 CABLES1Q8TDN4 633 aa10.13□□□□□ -0.79
PTPRK-206ENST00000368215 SNX21Q969T3 373 aa10.13□□□□□ -0.79
PTPRK-206ENST00000368215 LARP1BQ659C4 914 aaKnown RBP10.13□□□□□ -0.79
PTPRK-206ENST00000368215 TSPY26PQ9H489 355 aa10.13□□□□□ -0.79
PTPRK-206ENST00000368215 ISY1Q9ULR0 285 aaKnown RBP10.13□□□□□ -0.79
PTPRK-206ENST00000368215 PLEKHG3A1L390 1219 aa10.12□□□□□ -0.79
PTPRK-206ENST00000368215 GOLGA6L19H0YKK7 550 aa10.12□□□□□ -0.79
PTPRK-206ENST00000368215 FKBP4Q02790 459 aaKnown RBP eCLIP10.12□□□□□ -0.79
PTPRK-206ENST00000368215 LGR6Q9HBX8 967 aa10.12□□□□□ -0.79
PTPRK-206ENST00000368215 TRDNQ13061 729 aa10.12□□□□□ -0.79
PTPRK-206ENST00000368215 CWF19L2Q2TBE0 894 aaKnown RBP10.12□□□□□ -0.79
PTPRK-206ENST00000368215 ESYT1Q9BSJ8 1104 aa10.12□□□□□ -0.79
PTPRK-206ENST00000368215 RALYLQ86SE5 291 aaKnown RBP10.12□□□□□ -0.79
PTPRK-206ENST00000368215 ZGPATQ8N5A5 531 aaKnown RBP10.12□□□□□ -0.79
PTPRK-206ENST00000368215 TMX3Q96JJ7 454 aa10.12□□□□□ -0.79
PTPRK-206ENST00000368215 HYPKQ9NX55 129 aa10.12□□□□□ -0.79
PTPRK-206ENST00000368215 RBM27Q9P2N5 1060 aaKnown RBP10.12□□□□□ -0.79
PTPRK-206ENST00000368215 CFAP74Q9C0B2 1584 aa10.12□□□□□ -0.79
PTPRK-206ENST00000368215 MAP3K5Q99683 1374 aa10.12□□□□□ -0.79
PTPRK-206ENST00000368215 GCP02774 474 aa10.12□□□□□ -0.79
PTPRK-206ENST00000368215 CCDC173Q0VFZ6 552 aa10.11□□□□□ -0.79
PTPRK-206ENST00000368215 ORAI2Q96SN7 254 aa10.11□□□□□ -0.79
PTPRK-206ENST00000368215 ECHDC1Q9NTX5 307 aa10.11□□□□□ -0.79
PTPRK-206ENST00000368215 TSPOAP1O95153 1857 aa10.11□□□□□ -0.79
PTPRK-206ENST00000368215 A0A087WZG4 1122 aa10.11□□□□□ -0.79
PTPRK-206ENST00000368215 PNMA6EA0A0J9YXQ4 647 aa10.11□□□□□ -0.79
PTPRK-206ENST00000368215 XRCC6P12956 609 aaKnown RBP eCLIP10.11□□□□□ -0.79
PTPRK-206ENST00000368215 RBM25P49756 843 aaKnown RBP10.11□□□□□ -0.79
PTPRK-206ENST00000368215 UBE3BQ7Z3V4 1068 aa10.11□□□□□ -0.79
PTPRK-206ENST00000368215 USP26Q9BXU7 913 aa10.11□□□□□ -0.79
PTPRK-206ENST00000368215 ABCC4O15439 1325 aa10.11□□□□□ -0.79
PTPRK-206ENST00000368215 SBNO1A3KN83 1393 aa10.11□□□□□ -0.79
PTPRK-206ENST00000368215 CLASP1Q7Z460 1538 aa10.11□□□□□ -0.79
PTPRK-206ENST00000368215 ESPNB1AK53 854 aa10.11□□□□□ -0.79
PTPRK-206ENST00000368215 ROBO2Q9HCK4 1378 aa10.11□□□□□ -0.79
PTPRK-206ENST00000368215 NFXL1Q6ZNB6 911 aa10.1□□□□□ -0.79
PTPRK-206ENST00000368215 TULP1O00294 542 aaPredicted RBP10.1□□□□□ -0.79
PTPRK-206ENST00000368215 AKAP4Q5JQC9 854 aa10.1□□□□□ -0.79
PTPRK-206ENST00000368215 KIF6Q6ZMV9 814 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms