RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 HSP90AB2PQ58FF8 381 aa15.7■□□□□ 0.1
PTPRK-204ENST00000368210 ZSCAN31Q96LW9 406 aaPredicted RBP15.7■□□□□ 0.1
PTPRK-204ENST00000368210 PTCD1O75127 700 aaKnown RBP15.69■□□□□ 0.1
PTPRK-204ENST00000368210 KRT85P78386 507 aa15.69■□□□□ 0.1
PTPRK-204ENST00000368210 ZNF396Q96N95 335 aaPredicted RBP15.69■□□□□ 0.1
PTPRK-204ENST00000368210 MPHOSPH8Q99549 860 aa15.69■□□□□ 0.1
PTPRK-204ENST00000368210 BMP2KLQ5H9B9 411 aa15.69■□□□□ 0.1
PTPRK-204ENST00000368210 UPF3BQ9BZI7 483 aaKnown RBP15.69■□□□□ 0.1
PTPRK-204ENST00000368210 UHRF1BP1LA0JNW5 1464 aa15.69■□□□□ 0.1
PTPRK-204ENST00000368210 DYNC1I1O14576 645 aa15.69■□□□□ 0.1
PTPRK-204ENST00000368210 CEBPZQ03701 1054 aaKnown RBP15.69■□□□□ 0.1
PTPRK-204ENST00000368210 ARHGAP45Q92619 1136 aa15.69■□□□□ 0.1
PTPRK-204ENST00000368210 ATP2B1P20020 1258 aa15.69■□□□□ 0.1
PTPRK-204ENST00000368210 TBC1D2Q9BYX2 928 aa15.69■□□□□ 0.1
PTPRK-204ENST00000368210 PCDHB15Q9Y5E8 787 aa15.69■□□□□ 0.1
PTPRK-204ENST00000368210 ADGRL2O95490 1459 aa15.68■□□□□ 0.1
PTPRK-204ENST00000368210 KRT32Q14532 448 aa15.68■□□□□ 0.1
PTPRK-204ENST00000368210 TRIM5Q9C035 493 aa15.68■□□□□ 0.1
PTPRK-204ENST00000368210 GNL3LQ9NVN8 582 aaKnown RBP15.68■□□□□ 0.1
PTPRK-204ENST00000368210 STK38Q15208 465 aa15.68■□□□□ 0.1
PTPRK-204ENST00000368210 PCMTD1Q96MG8 357 aaPredicted RBP15.68■□□□□ 0.1
PTPRK-204ENST00000368210 UHRF1BP1Q6BDS2 1440 aa15.68■□□□□ 0.1
PTPRK-204ENST00000368210 GTPBP4Q9BZE4 634 aaKnown RBP15.68■□□□□ 0.1
PTPRK-204ENST00000368210 PIK3C2GO75747 1445 aa15.68■□□□□ 0.1
PTPRK-204ENST00000368210 ABCA5Q8WWZ7 1642 aa15.67■□□□□ 0.1
PTPRK-204ENST00000368210 HDAC1Q13547 482 aaPredicted RBP15.67■□□□□ 0.1
PTPRK-204ENST00000368210 OLFM4Q6UX06 510 aa15.67■□□□□ 0.1
PTPRK-204ENST00000368210 POLKQ9UBT6 870 aa15.67■□□□□ 0.1
PTPRK-204ENST00000368210 ZSCAN25Q6NSZ9 544 aa15.67■□□□□ 0.1
PTPRK-204ENST00000368210 SMAP1Q8IYB5 467 aaPredicted RBP15.67■□□□□ 0.1
PTPRK-204ENST00000368210 NACAP1Q9BZK3 213 aa15.67■□□□□ 0.1
PTPRK-204ENST00000368210 ERICH4A6NGS2 130 aa15.66■□□□□ 0.1
PTPRK-204ENST00000368210 CCDC85AQ96PX6 553 aaPredicted RBP15.66■□□□□ 0.1
PTPRK-204ENST00000368210 PLEKHH1Q9ULM0 1364 aa15.66■□□□□ 0.1
PTPRK-204ENST00000368210 STARD3NLO95772 234 aa15.66■□□□□ 0.1
PTPRK-204ENST00000368210 CASTP20810 708 aaKnown RBP15.66■□□□□ 0.1
PTPRK-204ENST00000368210 TIGD1Q96MW7 591 aa15.66■□□□□ 0.1
PTPRK-204ENST00000368210 CTNNA3Q9UI47 895 aa15.66■□□□□ 0.1
PTPRK-204ENST00000368210 MTMR7Q9Y216 660 aa15.66■□□□□ 0.1
PTPRK-204ENST00000368210 MYD88Q99836 296 aa15.66■□□□□ 0.1
PTPRK-204ENST00000368210 HYPKQ9NX55 129 aa15.66■□□□□ 0.1
PTPRK-204ENST00000368210 SAMD9Q5K651 1589 aa15.65■□□□□ 0.1
PTPRK-204ENST00000368210 ABCC2Q92887 1545 aa15.65■□□□□ 0.1
PTPRK-204ENST00000368210 PPIP5K1Q6PFW1 1433 aa15.65■□□□□ 0.1
PTPRK-204ENST00000368210 RIMS2Q9UQ26 1411 aa15.65■□□□□ 0.1
PTPRK-204ENST00000368210 NUTM2BA6NNL0 878 aaPredicted RBP15.65■□□□□ 0.1
PTPRK-204ENST00000368210 NUTM2EB1AL46 878 aaPredicted RBP15.65■□□□□ 0.1
PTPRK-204ENST00000368210 NUTM2AQ8IVF1 878 aaPredicted RBP15.65■□□□□ 0.1
PTPRK-204ENST00000368210 TEX14Q8IWB6 1497 aa15.65■□□□□ 0.1
PTPRK-204ENST00000368210 TTC21AQ8NDW8 1320 aa15.65■□□□□ 0.1
PTPRK-204ENST00000368210 CCDC70Q6NSX1 233 aa15.65■□□□□ 0.1
PTPRK-204ENST00000368210 BOLA2Q9H3K6 86 aa15.65■□□□□ 0.1
PTPRK-204ENST00000368210 TBC1D9Q6ZT07 1266 aa15.65■□□□□ 0.1
PTPRK-204ENST00000368210 COL17A1Q9UMD9 1497 aaPredicted RBP15.65■□□□□ 0.1
PTPRK-204ENST00000368210 SLC3A2P08195 630 aaKnown RBP15.65■□□□□ 0.1
PTPRK-204ENST00000368210 CCDC192P0DO97 292 aa15.64■□□□□ 0.09
PTPRK-204ENST00000368210 CEP89Q96ST8 783 aa15.64■□□□□ 0.09
PTPRK-204ENST00000368210 KRT28Q7Z3Y7 464 aa15.64■□□□□ 0.09
PTPRK-204ENST00000368210 HSP90AB3PQ58FF7 597 aa15.64■□□□□ 0.09
PTPRK-204ENST00000368210 JMYQ8N9B5 988 aa15.64■□□□□ 0.09
PTPRK-204ENST00000368210 FMNL2Q96PY5 1086 aa15.64■□□□□ 0.09
PTPRK-204ENST00000368210 TBC1D32Q96NH3 1257 aa15.63■□□□□ 0.09
PTPRK-204ENST00000368210 PRPF40BQ6NWY9 871 aaKnown RBP15.63■□□□□ 0.09
PTPRK-204ENST00000368210 PAXIP1Q6ZW49 1069 aaPredicted RBP15.63■□□□□ 0.09
PTPRK-204ENST00000368210 ME1P48163 572 aa15.63■□□□□ 0.09
PTPRK-204ENST00000368210 CCDC112Q8NEF3 446 aa15.63■□□□□ 0.09
PTPRK-204ENST00000368210 BCL11BQ9C0K0 894 aaPredicted RBP15.63■□□□□ 0.09
PTPRK-204ENST00000368210 TRIM22Q8IYM9 498 aa15.63■□□□□ 0.09
PTPRK-204ENST00000368210 ZRANB1Q9UGI0 708 aa15.63■□□□□ 0.09
PTPRK-204ENST00000368210 PI4KAP2A4QPH2 592 aa15.62■□□□□ 0.09
PTPRK-204ENST00000368210 PI4KAP1Q8N8J0 262 aa15.62■□□□□ 0.09
PTPRK-204ENST00000368210 TNMDQ9H2S6 317 aa15.62■□□□□ 0.09
PTPRK-204ENST00000368210 TMOD3Q9NYL9 352 aa15.62■□□□□ 0.09
PTPRK-204ENST00000368210 NUCB1Q02818 461 aa15.62■□□□□ 0.09
PTPRK-204ENST00000368210 CCDC8Q9H0W5 538 aaPredicted RBP15.62■□□□□ 0.09
PTPRK-204ENST00000368210 PBRM1Q86U86 1689 aa15.62■□□□□ 0.09
PTPRK-204ENST00000368210 PLCD3Q8N3E9 789 aa15.62■□□□□ 0.09
PTPRK-204ENST00000368210 C8orf58Q8NAV2 365 aa15.62■□□□□ 0.09
PTPRK-204ENST00000368210 CCDC191Q8NCU4 936 aa15.62■□□□□ 0.09
PTPRK-204ENST00000368210 PIK3R4Q99570 1358 aa15.62■□□□□ 0.09
PTPRK-204ENST00000368210 EIF4A2Q14240 407 aaKnown RBP15.61■□□□□ 0.09
PTPRK-204ENST00000368210 CTDP1Q9Y5B0 961 aaPredicted RBP15.61■□□□□ 0.09
PTPRK-204ENST00000368210 TCEAL9Q9UHQ7 104 aa15.61■□□□□ 0.09
PTPRK-204ENST00000368210 SPATA32Q96LK8 384 aa15.61■□□□□ 0.09
PTPRK-204ENST00000368210 IDH1O75874 414 aaKnown RBP15.61■□□□□ 0.09
PTPRK-204ENST00000368210 MEIS3Q99687 375 aa15.61■□□□□ 0.09
PTPRK-204ENST00000368210 A0A1W2PP64 1363 aa15.6■□□□□ 0.09
PTPRK-204ENST00000368210 METTL24Q5JXM2 366 aa15.6■□□□□ 0.09
PTPRK-204ENST00000368210 PPP1R42Q7Z4L9 355 aa15.6■□□□□ 0.09
PTPRK-204ENST00000368210 CFAP45Q9UL16 551 aa15.6■□□□□ 0.09
PTPRK-204ENST00000368210 STK11IPQ8N1F8 1099 aa15.6■□□□□ 0.09
PTPRK-204ENST00000368210 ERCC4Q92889 916 aaPredicted RBP15.6■□□□□ 0.09
PTPRK-204ENST00000368210 AKAP2Q9Y2D5 859 aa15.6■□□□□ 0.09
PTPRK-204ENST00000368210 MAP3K2Q9Y2U5 619 aa15.6■□□□□ 0.09
PTPRK-204ENST00000368210 A0A087WZG4 1122 aa15.6■□□□□ 0.09
PTPRK-204ENST00000368210 TTC22Q5TAA0 569 aa15.6■□□□□ 0.09
PTPRK-204ENST00000368210 CCDC83Q8IWF9 413 aa15.6■□□□□ 0.09
PTPRK-204ENST00000368210 MRPL50Q8N5N7 158 aaKnown RBP15.6■□□□□ 0.09
PTPRK-204ENST00000368210 GIMAP7Q8NHV1 300 aa15.6■□□□□ 0.09
PTPRK-204ENST00000368210 RLBP1P12271 317 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms