RNA–Protein interactions for RNA: ENST00000368198.7

SH2D2A-201, Transcript of SH2 domain containing 2A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SH2D2A, Length 1,599 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D2A-201ENST00000368198 VAMP4O75379 141 aa23.26■■□□□ 1.31
SH2D2A-201ENST00000368198 DDB1Q16531 1140 aa23.26■■□□□ 1.31
SH2D2A-201ENST00000368198 KDM2BQ8NHM5 1336 aa23.25■■□□□ 1.31
SH2D2A-201ENST00000368198 CHL1O00533 1208 aa23.25■■□□□ 1.31
SH2D2A-201ENST00000368198 CENPQQ7L2Z9 268 aaPredicted RBP23.25■■□□□ 1.31
SH2D2A-201ENST00000368198 MCM10Q7L590 875 aa23.25■■□□□ 1.31
SH2D2A-201ENST00000368198 DDX54Q8TDD1 881 aaKnown RBP23.25■■□□□ 1.31
SH2D2A-201ENST00000368198 SPG7Q9UQ90 795 aa23.25■■□□□ 1.31
SH2D2A-201ENST00000368198 IPO8O15397 1037 aaKnown RBP23.24■■□□□ 1.31
SH2D2A-201ENST00000368198 AMOTQ4VCS5 1084 aa23.24■■□□□ 1.31
SH2D2A-201ENST00000368198 DZIP1LQ8IYY4 767 aaKnown RBP23.24■■□□□ 1.31
SH2D2A-201ENST00000368198 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.24■■□□□ 1.31
SH2D2A-201ENST00000368198 LRRC37A3O60309 1634 aa23.24■■□□□ 1.31
SH2D2A-201ENST00000368198 RLBP1P12271 317 aa23.23■■□□□ 1.31
SH2D2A-201ENST00000368198 CLUAP1Q96AJ1 413 aa23.23■■□□□ 1.31
SH2D2A-201ENST00000368198 PKD1L3Q7Z443 1732 aa23.23■■□□□ 1.31
SH2D2A-201ENST00000368198 CYP27B1O15528 508 aa23.23■■□□□ 1.31
SH2D2A-201ENST00000368198 TWISTNBQ3B726 338 aaPredicted RBP23.23■■□□□ 1.31
SH2D2A-201ENST00000368198 ZNF530Q6P9A1 599 aaPredicted RBP23.23■■□□□ 1.31
SH2D2A-201ENST00000368198 ATF7IPQ6VMQ6 1270 aa23.23■■□□□ 1.31
SH2D2A-201ENST00000368198 FTSJ3Q8IY81 847 aaKnown RBP23.23■■□□□ 1.31
SH2D2A-201ENST00000368198 TNNQ9UQP3 1299 aa23.22■■□□□ 1.31
SH2D2A-201ENST00000368198 SHANK3Q9BYB0 1731 aa23.22■■□□□ 1.31
SH2D2A-201ENST00000368198 RGS12O14924 1447 aa23.21■■□□□ 1.31
SH2D2A-201ENST00000368198 TNS2Q63HR2 1409 aa23.21■■□□□ 1.31
SH2D2A-201ENST00000368198 GNAT3A8MTJ3 354 aa23.21■■□□□ 1.31
SH2D2A-201ENST00000368198 TRIM27P14373 513 aa23.21■■□□□ 1.31
SH2D2A-201ENST00000368198 TSPYL6Q8N831 410 aa23.21■■□□□ 1.31
SH2D2A-201ENST00000368198 NOB1Q9ULX3 412 aaKnown RBP23.21■■□□□ 1.31
SH2D2A-201ENST00000368198 MAP3K5Q99683 1374 aa23.2■■□□□ 1.3
SH2D2A-201ENST00000368198 PLEKHG2Q9H7P9 1386 aa23.2■■□□□ 1.3
SH2D2A-201ENST00000368198 MVPQ14764 893 aaKnown RBP23.2■■□□□ 1.3
SH2D2A-201ENST00000368198 MARCH10Q8NA82 808 aaPredicted RBP23.2■■□□□ 1.3
SH2D2A-201ENST00000368198 C8orf58Q8NAV2 365 aa23.2■■□□□ 1.3
SH2D2A-201ENST00000368198 PCDH11XQ9BZA7 1347 aa23.19■■□□□ 1.3
SH2D2A-201ENST00000368198 PCDH11YQ9BZA8 1340 aa23.19■■□□□ 1.3
SH2D2A-201ENST00000368198 BRWD3Q6RI45 1802 aa23.19■■□□□ 1.3
SH2D2A-201ENST00000368198 PHKG2P15735 406 aa23.18■■□□□ 1.3
SH2D2A-201ENST00000368198 FAM182BQ5T319 152 aa23.18■■□□□ 1.3
SH2D2A-201ENST00000368198 MRPL50Q8N5N7 158 aaKnown RBP23.18■■□□□ 1.3
SH2D2A-201ENST00000368198 IFNL2Q8IZJ0 200 aa23.18■■□□□ 1.3
SH2D2A-201ENST00000368198 ARHGAP45Q92619 1136 aa23.18■■□□□ 1.3
SH2D2A-201ENST00000368198 TCERG1O14776 1098 aaKnown RBP23.17■■□□□ 1.3
SH2D2A-201ENST00000368198 AKAP4Q5JQC9 854 aa23.17■■□□□ 1.3
SH2D2A-201ENST00000368198 C1orf141Q5JVX7 400 aa23.17■■□□□ 1.3
SH2D2A-201ENST00000368198 ELL2O00472 640 aaPredicted RBP23.15■■□□□ 1.3
SH2D2A-201ENST00000368198 KRT27Q7Z3Y8 459 aa23.15■■□□□ 1.3
SH2D2A-201ENST00000368198 RBM19Q9Y4C8 960 aaKnown RBP23.15■■□□□ 1.3
SH2D2A-201ENST00000368198 MPRIPQ6WCQ1 1025 aa23.14■■□□□ 1.3
SH2D2A-201ENST00000368198 BABAM1Q9NWV8 329 aa23.14■■□□□ 1.3
SH2D2A-201ENST00000368198 DDX19BQ9UMR2 479 aa23.14■■□□□ 1.3
SH2D2A-201ENST00000368198 TSPYL4Q9UJ04 414 aa23.14■■□□□ 1.29
SH2D2A-201ENST00000368198 LGR6Q9HBX8 967 aa23.13■■□□□ 1.29
SH2D2A-201ENST00000368198 NKX1-1Q15270 411 aaPredicted RBP23.12■■□□□ 1.29
SH2D2A-201ENST00000368198 IL17REQ8NFR9 667 aa23.11■■□□□ 1.29
SH2D2A-201ENST00000368198 ITPRIPQ8IWB1 547 aa23.1■■□□□ 1.29
SH2D2A-201ENST00000368198 RNMTO43148 476 aaKnown RBP23.1■■□□□ 1.29
SH2D2A-201ENST00000368198 TMEM57Q8N5G2 664 aa23.1■■□□□ 1.29
SH2D2A-201ENST00000368198 KDM6AO15550 1401 aaPredicted RBP23.09■■□□□ 1.29
SH2D2A-201ENST00000368198 HSP90AB1P08238 724 aaKnown RBP23.09■■□□□ 1.29
SH2D2A-201ENST00000368198 DCAF5Q96JK2 942 aa23.09■■□□□ 1.29
SH2D2A-201ENST00000368198 API5Q9BZZ5 524 aaKnown RBP23.09■■□□□ 1.29
SH2D2A-201ENST00000368198 CEMIPQ8WUJ3 1361 aa23.08■■□□□ 1.29
SH2D2A-201ENST00000368198 TAF7Q15545 349 aaPredicted RBP23.08■■□□□ 1.29
SH2D2A-201ENST00000368198 ACSBG1Q96GR2 724 aa23.08■■□□□ 1.29
SH2D2A-201ENST00000368198 SOS1Q07889 1333 aaPredicted RBP23.07■■□□□ 1.28
SH2D2A-201ENST00000368198 IGHDP01880 384 aa23.07■■□□□ 1.28
SH2D2A-201ENST00000368198 CHMP4BQ9H444 224 aaKnown RBP23.07■■□□□ 1.28
SH2D2A-201ENST00000368198 MIS18AQ9NYP9 233 aa23.07■■□□□ 1.28
SH2D2A-201ENST00000368198 PCDHB15Q9Y5E8 787 aa23.07■■□□□ 1.28
SH2D2A-201ENST00000368198 KRT24Q2M2I5 525 aa23.06■■□□□ 1.28
SH2D2A-201ENST00000368198 ABCC4O15439 1325 aa23.05■■□□□ 1.28
SH2D2A-201ENST00000368198 RWDD1Q9H446 243 aaPredicted RBP23.05■■□□□ 1.28
SH2D2A-201ENST00000368198 TOGARAM1Q9Y4F4 1720 aa23.04■■□□□ 1.28
SH2D2A-201ENST00000368198 PRIM1P49642 420 aaKnown RBP23.04■■□□□ 1.28
SH2D2A-201ENST00000368198 VIRMAQ69YN4 1812 aaKnown RBP23.04■■□□□ 1.28
SH2D2A-201ENST00000368198 SCN11AQ9UI33 1791 aa23.03■■□□□ 1.28
SH2D2A-201ENST00000368198 KCNQ2O43526 872 aa23.03■■□□□ 1.28
SH2D2A-201ENST00000368198 FAM196AQ6ZSG2 479 aa23.03■■□□□ 1.28
SH2D2A-201ENST00000368198 ADAMTS7Q9UKP4 1686 aa23.03■■□□□ 1.28
SH2D2A-201ENST00000368198 KAT6BQ8WYB5 2073 aa23.03■■□□□ 1.28
SH2D2A-201ENST00000368198 PTF1AQ7RTS3 328 aa23.02■■□□□ 1.28
SH2D2A-201ENST00000368198 SYTL4Q96C24 671 aaPredicted RBP23.02■■□□□ 1.28
SH2D2A-201ENST00000368198 ZBTB40Q9NUA8 1239 aa23.02■■□□□ 1.28
SH2D2A-201ENST00000368198 PTPRCP08575 1304 aa23.02■■□□□ 1.28
SH2D2A-201ENST00000368198 DOT1LQ8TEK3 1739 aa23.02■■□□□ 1.28
SH2D2A-201ENST00000368198 ERVV-2B6SEH9 535 aa23.01■■□□□ 1.27
SH2D2A-201ENST00000368198 NFATC2IPQ8NCF5 419 aa23.01■■□□□ 1.27
SH2D2A-201ENST00000368198 BCL9O00512 1426 aa23.01■■□□□ 1.27
SH2D2A-201ENST00000368198 CABP4P57796 275 aa23.01■■□□□ 1.27
SH2D2A-201ENST00000368198 SLC52A2Q9HAB3 445 aa23.01■■□□□ 1.27
SH2D2A-201ENST00000368198 TEFQ10587 303 aa23■■□□□ 1.27
SH2D2A-201ENST00000368198 HDAC1Q13547 482 aaPredicted RBP22.98■■□□□ 1.27
SH2D2A-201ENST00000368198 ILDR2Q71H61 639 aa22.98■■□□□ 1.27
SH2D2A-201ENST00000368198 PIGBQ92521 554 aa22.98■■□□□ 1.27
SH2D2A-201ENST00000368198 ITGB4P16144 1822 aa22.98■■□□□ 1.27
SH2D2A-201ENST00000368198 SBF2Q86WG5 1849 aa22.98■■□□□ 1.27
SH2D2A-201ENST00000368198 EP400Q96L91 3159 aa22.98■■□□□ 1.27
SH2D2A-201ENST00000368198 KDM3BQ7LBC6 1761 aa22.97■■□□□ 1.27
SH2D2A-201ENST00000368198 TRIM37O94972 964 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms