RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 FIBPO43427 364 aa8.29□□□□□ -1.08
SPTA1-201ENST00000368147 SMARCA5O60264 1052 aaPredicted RBP8.29□□□□□ -1.08
SPTA1-201ENST00000368147 TOM1O60784 492 aa8.29□□□□□ -1.08
SPTA1-201ENST00000368147 NAIPQ13075 1403 aa8.29□□□□□ -1.08
SPTA1-201ENST00000368147 MYO1BO43795 1136 aa8.28□□□□□ -1.08
SPTA1-201ENST00000368147 JAG2Q9Y219 1238 aa8.28□□□□□ -1.08
SPTA1-201ENST00000368147 HIP1O00291 1037 aa8.28□□□□□ -1.08
SPTA1-201ENST00000368147 ENOX2Q16206 610 aaKnown RBP8.28□□□□□ -1.08
SPTA1-201ENST00000368147 ME1P48163 572 aa8.28□□□□□ -1.08
SPTA1-201ENST00000368147 DDX46Q7L014 1031 aaKnown RBP8.28□□□□□ -1.08
SPTA1-201ENST00000368147 DMRT2Q9Y5R5 561 aa8.28□□□□□ -1.08
SPTA1-201ENST00000368147 IGF1RP08069 1367 aa8.28□□□□□ -1.08
SPTA1-201ENST00000368147 KINO60870 393 aaKnown RBP8.28□□□□□ -1.08
SPTA1-201ENST00000368147 CT47B1P0C2W7 299 aaPredicted RBP8.28□□□□□ -1.08
SPTA1-201ENST00000368147 FILIP1LQ4L180 1135 aa8.28□□□□□ -1.08
SPTA1-201ENST00000368147 BOLA2Q9H3K6 86 aa8.28□□□□□ -1.08
SPTA1-201ENST00000368147 CHMP5Q9NZZ3 219 aa8.28□□□□□ -1.08
SPTA1-201ENST00000368147 LMTK3Q96Q04 1460 aa8.28□□□□□ -1.08
SPTA1-201ENST00000368147 TRIM21P19474 475 aaKnown RBP8.28□□□□□ -1.08
SPTA1-201ENST00000368147 SEPT6Q14141 434 aa8.28□□□□□ -1.08
SPTA1-201ENST00000368147 CCDC91Q7Z6B0 441 aa8.28□□□□□ -1.08
SPTA1-201ENST00000368147 ZWINTO95229 277 aa8.27□□□□□ -1.08
SPTA1-201ENST00000368147 SERPINC1P01008 464 aa8.27□□□□□ -1.08
SPTA1-201ENST00000368147 TNNT1P13805 278 aa8.27□□□□□ -1.08
SPTA1-201ENST00000368147 NBPF6Q5VWK0 638 aa8.27□□□□□ -1.08
SPTA1-201ENST00000368147 NBPF5PQ86XG9 351 aaPredicted RBP8.27□□□□□ -1.08
SPTA1-201ENST00000368147 PNISRQ8TF01 805 aaKnown RBP8.27□□□□□ -1.08
SPTA1-201ENST00000368147 NBPF4Q96M43 638 aa8.27□□□□□ -1.08
SPTA1-201ENST00000368147 FAM13BQ9NYF5 915 aa8.27□□□□□ -1.08
SPTA1-201ENST00000368147 IQSEC3Q9UPP2 1182 aaPredicted RBP8.27□□□□□ -1.08
SPTA1-201ENST00000368147 POLD1P28340 1107 aa8.27□□□□□ -1.09
SPTA1-201ENST00000368147 GUCY1B3Q02153 619 aa8.27□□□□□ -1.09
SPTA1-201ENST00000368147 CCDC181Q5TID7 509 aa8.27□□□□□ -1.09
SPTA1-201ENST00000368147 FAM114A1Q8IWE2 563 aa8.27□□□□□ -1.09
SPTA1-201ENST00000368147 CUL5Q93034 780 aa8.27□□□□□ -1.09
SPTA1-201ENST00000368147 CENPHQ9H3R5 247 aa8.27□□□□□ -1.09
SPTA1-201ENST00000368147 MMRN2Q9H8L6 949 aa8.27□□□□□ -1.09
SPTA1-201ENST00000368147 IFIT5Q13325 482 aaKnown RBP8.27□□□□□ -1.09
SPTA1-201ENST00000368147 NME9Q86XW9 330 aa8.27□□□□□ -1.09
SPTA1-201ENST00000368147 TXLNBQ8N3L3 684 aa8.27□□□□□ -1.09
SPTA1-201ENST00000368147 KCNH5Q8NCM2 988 aa8.27□□□□□ -1.09
SPTA1-201ENST00000368147 GRIPAP1Q4V328 841 aa8.27□□□□□ -1.09
SPTA1-201ENST00000368147 ZNF526Q8TF50 670 aaPredicted RBP8.27□□□□□ -1.09
SPTA1-201ENST00000368147 LARP6Q9BRS8 491 aaKnown RBP8.27□□□□□ -1.09
SPTA1-201ENST00000368147 SLC5A1P13866 664 aa8.26□□□□□ -1.09
SPTA1-201ENST00000368147 CCT4P50991 539 aaKnown RBP8.26□□□□□ -1.09
SPTA1-201ENST00000368147 ZNF396Q96N95 335 aaPredicted RBP8.26□□□□□ -1.09
SPTA1-201ENST00000368147 PPFIA3O75145 1194 aa8.26□□□□□ -1.09
SPTA1-201ENST00000368147 ZNF354CQ86Y25 554 aa8.26□□□□□ -1.09
SPTA1-201ENST00000368147 MSH6P52701 1360 aa8.26□□□□□ -1.09
SPTA1-201ENST00000368147 KIF14Q15058 1648 aa8.26□□□□□ -1.09
SPTA1-201ENST00000368147 IFT140Q96RY7 1462 aa8.26□□□□□ -1.09
SPTA1-201ENST00000368147 RAB11FIP4Q86YS3 637 aa8.26□□□□□ -1.09
SPTA1-201ENST00000368147 CYP46A1Q9Y6A2 500 aa8.26□□□□□ -1.09
SPTA1-201ENST00000368147 TMCO5BA8MYB1 307 aa8.26□□□□□ -1.09
SPTA1-201ENST00000368147 SMARCE1Q969G3 411 aa8.26□□□□□ -1.09
SPTA1-201ENST00000368147 CCDC8Q9H0W5 538 aaPredicted RBP8.26□□□□□ -1.09
SPTA1-201ENST00000368147 IFIT1P09914 478 aaKnown RBP8.26□□□□□ -1.09
SPTA1-201ENST00000368147 FBLN1P23142 703 aa8.26□□□□□ -1.09
SPTA1-201ENST00000368147 JAKMIP1Q96N16 626 aaKnown RBP8.26□□□□□ -1.09
SPTA1-201ENST00000368147 TRIM5Q9C035 493 aa8.26□□□□□ -1.09
SPTA1-201ENST00000368147 FAM107BQ9H098 131 aa8.26□□□□□ -1.09
SPTA1-201ENST00000368147 DAAM2Q86T65 1068 aa8.26□□□□□ -1.09
SPTA1-201ENST00000368147 CKAP2LQ8IYA6 745 aa8.26□□□□□ -1.09
SPTA1-201ENST00000368147 DNAJC5BQ9UF47 199 aa8.26□□□□□ -1.09
SPTA1-201ENST00000368147 LRRC9Q6ZRR7 1453 aa8.26□□□□□ -1.09
SPTA1-201ENST00000368147 POLR3GO15318 223 aaPredicted RBP8.25□□□□□ -1.09
SPTA1-201ENST00000368147 STIM1Q13586 685 aa8.25□□□□□ -1.09
SPTA1-201ENST00000368147 SEPT10Q9P0V9 454 aa8.25□□□□□ -1.09
SPTA1-201ENST00000368147 NOL7Q9UMY1 257 aaKnown RBP8.25□□□□□ -1.09
SPTA1-201ENST00000368147 ANKRD18BA2A2Z9 1011 aa8.25□□□□□ -1.09
SPTA1-201ENST00000368147 PRKG1Q13976 671 aa8.25□□□□□ -1.09
SPTA1-201ENST00000368147 AXDND1Q5T1B0 1012 aaPredicted RBP8.25□□□□□ -1.09
SPTA1-201ENST00000368147 SETDB2Q96T68 719 aa8.25□□□□□ -1.09
SPTA1-201ENST00000368147 NSD3Q9BZ95 1437 aa8.25□□□□□ -1.09
SPTA1-201ENST00000368147 FAM135AQ9P2D6 1515 aa8.25□□□□□ -1.09
SPTA1-201ENST00000368147 F6X3S4 739 aa8.25□□□□□ -1.09
SPTA1-201ENST00000368147 DUSP27Q5VZP5 1158 aa8.25□□□□□ -1.09
SPTA1-201ENST00000368147 EP400NLQ6ZTU2 488 aa8.25□□□□□ -1.09
SPTA1-201ENST00000368147 PAIP2Q9BPZ3 127 aaKnown RBP8.25□□□□□ -1.09
SPTA1-201ENST00000368147 PHF8Q9UPP1 1060 aa8.25□□□□□ -1.09
SPTA1-201ENST00000368147 PRPF40AO75400 957 aaKnown RBP8.25□□□□□ -1.09
SPTA1-201ENST00000368147 IMMTQ16891 758 aaKnown RBP8.25□□□□□ -1.09
SPTA1-201ENST00000368147 EAPPQ56P03 285 aaPredicted RBP8.25□□□□□ -1.09
SPTA1-201ENST00000368147 CAVIN1Q6NZI2 390 aaKnown RBP8.25□□□□□ -1.09
SPTA1-201ENST00000368147 PARP3Q9Y6F1 533 aa8.25□□□□□ -1.09
SPTA1-201ENST00000368147 DESP17661 470 aa8.24□□□□□ -1.09
SPTA1-201ENST00000368147 FAM193AP78312 1265 aa8.24□□□□□ -1.09
SPTA1-201ENST00000368147 CEP57L1Q8IYX8 460 aa8.24□□□□□ -1.09
SPTA1-201ENST00000368147 NAPBQ9H115 298 aa8.24□□□□□ -1.09
SPTA1-201ENST00000368147 LUC7LQ9NQ29 371 aaKnown RBP8.24□□□□□ -1.09
SPTA1-201ENST00000368147 PUF60Q9UHX1 559 aaKnown RBP8.24□□□□□ -1.09
SPTA1-201ENST00000368147 EXOC6BQ9Y2D4 811 aa8.24□□□□□ -1.09
SPTA1-201ENST00000368147 NBPF8Q3BBV2 869 aa8.24□□□□□ -1.09
SPTA1-201ENST00000368147 NBPF14Q5TI25 921 aa8.24□□□□□ -1.09
SPTA1-201ENST00000368147 TAX1BP1Q86VP1 789 aa8.24□□□□□ -1.09
SPTA1-201ENST00000368147 CASTP20810 708 aaKnown RBP8.24□□□□□ -1.09
SPTA1-201ENST00000368147 ANAPC15P60006 121 aa8.24□□□□□ -1.09
SPTA1-201ENST00000368147 SPTY2D1Q68D10 685 aaPredicted RBP8.24□□□□□ -1.09
SPTA1-201ENST00000368147 BMP2KQ9NSY1 1161 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms