RNA–Protein interactions for RNA: ENST00000367309.1

PHLDA3-201, Transcript of pleckstrin homology like domain family A member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHLDA3, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDA3-201ENST00000367309 U2AF1Q01081 240 aaKnown RBP eCLIP28.75■■■□□ 2.19
PHLDA3-201ENST00000367309 NFATC2IPQ8NCF5 419 aa28.75■■■□□ 2.19
PHLDA3-201ENST00000367309 GAS2L2Q8NHY3 880 aa28.75■■■□□ 2.19
PHLDA3-201ENST00000367309 RNMTO43148 476 aaKnown RBP28.74■■■□□ 2.19
PHLDA3-201ENST00000367309 FCHSD2O94868 740 aa28.74■■■□□ 2.19
PHLDA3-201ENST00000367309 PRKAR2BP31323 418 aa28.74■■■□□ 2.19
PHLDA3-201ENST00000367309 MTFR1LQ9H019 292 aa28.74■■■□□ 2.19
PHLDA3-201ENST00000367309 LGR6Q9HBX8 967 aa28.74■■■□□ 2.19
PHLDA3-201ENST00000367309 MRC1P22897 1456 aa28.73■■■□□ 2.19
PHLDA3-201ENST00000367309 TUBGCP6Q96RT7 1819 aa28.73■■■□□ 2.19
PHLDA3-201ENST00000367309 PHACTR3Q96KR7 559 aa28.72■■■□□ 2.19
PHLDA3-201ENST00000367309 SLC52A2Q9HAB3 445 aa28.72■■■□□ 2.19
PHLDA3-201ENST00000367309 SLC16A10Q8TF71 515 aa28.71■■■□□ 2.19
PHLDA3-201ENST00000367309 ZNF831Q5JPB2 1677 aa28.7■■■□□ 2.19
PHLDA3-201ENST00000367309 C4BP0C0L5 1744 aa28.7■■■□□ 2.19
PHLDA3-201ENST00000367309 PTGER2P43116 358 aa28.7■■■□□ 2.18
PHLDA3-201ENST00000367309 ITPK1Q13572 414 aa28.7■■■□□ 2.18
PHLDA3-201ENST00000367309 MAP3K5Q99683 1374 aa28.7■■■□□ 2.18
PHLDA3-201ENST00000367309 ATP6V1AP38606 617 aa28.69■■■□□ 2.18
PHLDA3-201ENST00000367309 LINC00116Q8NCU8 138 aa28.69■■■□□ 2.18
PHLDA3-201ENST00000367309 SLC4A9Q96Q91 983 aa28.69■■■□□ 2.18
PHLDA3-201ENST00000367309 ATF5Q9Y2D1 282 aaPredicted RBP28.69■■■□□ 2.18
PHLDA3-201ENST00000367309 GNAT3A8MTJ3 354 aa28.68■■■□□ 2.18
PHLDA3-201ENST00000367309 SGIP1Q9BQI5 828 aa28.67■■■□□ 2.18
PHLDA3-201ENST00000367309 MYBBP1AQ9BQG0 1328 aaKnown RBP28.67■■■□□ 2.18
PHLDA3-201ENST00000367309 VIRMAQ69YN4 1812 aaKnown RBP28.66■■■□□ 2.18
PHLDA3-201ENST00000367309 COL23A1Q86Y22 540 aaPredicted RBP28.65■■■□□ 2.18
PHLDA3-201ENST00000367309 FLAD1Q8NFF5 587 aa28.65■■■□□ 2.18
PHLDA3-201ENST00000367309 AK7Q96M32 723 aa28.65■■■□□ 2.18
PHLDA3-201ENST00000367309 RBM42Q9BTD8 480 aaKnown RBP28.65■■■□□ 2.18
PHLDA3-201ENST00000367309 IL17REQ8NFR9 667 aa28.64■■■□□ 2.18
PHLDA3-201ENST00000367309 CEMIPQ8WUJ3 1361 aa28.62■■■□□ 2.17
PHLDA3-201ENST00000367309 COL24A1Q17RW2 1714 aa28.61■■■□□ 2.17
PHLDA3-201ENST00000367309 PTCD1O75127 700 aaKnown RBP28.61■■■□□ 2.17
PHLDA3-201ENST00000367309 AMIGO3Q86WK7 504 aa28.61■■■□□ 2.17
PHLDA3-201ENST00000367309 PRKRIP1Q9H875 184 aaPredicted RBP28.61■■■□□ 2.17
PHLDA3-201ENST00000367309 UBR3Q6ZT12 1888 aa28.61■■■□□ 2.17
PHLDA3-201ENST00000367309 ZNF316A6NFI3 1004 aaPredicted RBP28.6■■■□□ 2.17
PHLDA3-201ENST00000367309 CICQ96RK0 1608 aaPredicted RBP28.59■■■□□ 2.17
PHLDA3-201ENST00000367309 SSFA2P28290 1259 aa28.59■■■□□ 2.17
PHLDA3-201ENST00000367309 RC3H1Q5TC82 1133 aaKnown RBP28.59■■■□□ 2.17
PHLDA3-201ENST00000367309 COL5A3P25940 1745 aaPredicted RBP28.58■■■□□ 2.17
PHLDA3-201ENST00000367309 PLEKHF1Q96S99 279 aa28.58■■■□□ 2.17
PHLDA3-201ENST00000367309 CNTNAP4Q9C0A0 1308 aa28.58■■■□□ 2.17
PHLDA3-201ENST00000367309 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.57■■■□□ 2.16
PHLDA3-201ENST00000367309 TEFQ10587 303 aa28.57■■■□□ 2.16
PHLDA3-201ENST00000367309 SLC39A6Q13433 755 aa28.57■■■□□ 2.16
PHLDA3-201ENST00000367309 GNPATO15228 680 aa28.56■■■□□ 2.16
PHLDA3-201ENST00000367309 MSH5O43196 834 aa28.56■■■□□ 2.16
PHLDA3-201ENST00000367309 HTATSF1O43719 755 aaKnown RBP28.56■■■□□ 2.16
PHLDA3-201ENST00000367309 KCPQ6ZWJ8 1503 aa28.55■■■□□ 2.16
PHLDA3-201ENST00000367309 PNNQ9H307 717 aaKnown RBP28.55■■■□□ 2.16
PHLDA3-201ENST00000367309 SIPA1L3O60292 1781 aaPredicted RBP28.55■■■□□ 2.16
PHLDA3-201ENST00000367309 ARXQ96QS3 562 aa28.54■■■□□ 2.16
PHLDA3-201ENST00000367309 TJP1Q07157 1748 aa28.53■■■□□ 2.16
PHLDA3-201ENST00000367309 NEFMP07197 916 aa28.53■■■□□ 2.16
PHLDA3-201ENST00000367309 POLD1P28340 1107 aa28.53■■■□□ 2.16
PHLDA3-201ENST00000367309 SMIM5Q71RC9 77 aa28.53■■■□□ 2.16
PHLDA3-201ENST00000367309 SYT17Q9BSW7 474 aa28.53■■■□□ 2.16
PHLDA3-201ENST00000367309 PHF14O94880 888 aa28.52■■■□□ 2.16
PHLDA3-201ENST00000367309 VSIG10Q8N0Z9 540 aa28.52■■■□□ 2.16
PHLDA3-201ENST00000367309 RTF1Q92541 710 aaKnown RBP28.52■■■□□ 2.16
PHLDA3-201ENST00000367309 UBR2Q8IWV8 1755 aa28.52■■■□□ 2.16
PHLDA3-201ENST00000367309 RTCBQ9Y3I0 505 aaKnown RBP28.51■■■□□ 2.15
PHLDA3-201ENST00000367309 MYH14Q7Z406 1995 aaKnown RBP28.51■■■□□ 2.15
PHLDA3-201ENST00000367309 RPS6KA4O75676 772 aa28.5■■■□□ 2.15
PHLDA3-201ENST00000367309 ADRA2BP18089 450 aa28.5■■■□□ 2.15
PHLDA3-201ENST00000367309 ZNF790Q6PG37 636 aa28.5■■■□□ 2.15
PHLDA3-201ENST00000367309 FHDC1Q9C0D6 1143 aaPredicted RBP28.5■■■□□ 2.15
PHLDA3-201ENST00000367309 CRKLP46109 303 aaKnown RBP28.49■■■□□ 2.15
PHLDA3-201ENST00000367309 MCM10Q7L590 875 aa28.49■■■□□ 2.15
PHLDA3-201ENST00000367309 TTC5Q8N0Z6 440 aa28.49■■■□□ 2.15
PHLDA3-201ENST00000367309 NFE2L2Q16236 605 aa28.48■■■□□ 2.15
PHLDA3-201ENST00000367309 DNAJC10Q8IXB1 793 aa28.48■■■□□ 2.15
PHLDA3-201ENST00000367309 ZNF784Q8NCA9 323 aaPredicted RBP28.48■■■□□ 2.15
PHLDA3-201ENST00000367309 TRAPPC3LQ5T215 181 aa28.47■■■□□ 2.15
PHLDA3-201ENST00000367309 MSL1Q68DK7 614 aa28.47■■■□□ 2.15
PHLDA3-201ENST00000367309 MAPK8IP3Q9UPT6 1336 aa28.46■■■□□ 2.15
PHLDA3-201ENST00000367309 INTS5Q6P9B9 1019 aaKnown RBP28.46■■■□□ 2.15
PHLDA3-201ENST00000367309 UTRNP46939 3433 aa28.46■■■□□ 2.15
PHLDA3-201ENST00000367309 BTBD11A6QL63 1104 aa28.45■■■□□ 2.14
PHLDA3-201ENST00000367309 CYP19A1P11511 503 aaPredicted RBP28.45■■■□□ 2.14
PHLDA3-201ENST00000367309 DCTN1Q14203 1278 aa28.45■■■□□ 2.14
PHLDA3-201ENST00000367309 ZNF496Q96IT1 587 aaPredicted RBP28.45■■■□□ 2.14
PHLDA3-201ENST00000367309 ARHGEF1Q92888 912 aaKnown RBP28.44■■■□□ 2.14
PHLDA3-201ENST00000367309 HEG1Q9ULI3 1381 aa28.43■■■□□ 2.14
PHLDA3-201ENST00000367309 CCDC87Q9NVE4 849 aa28.43■■■□□ 2.14
PHLDA3-201ENST00000367309 DLG5Q8TDM6 1919 aa28.43■■■□□ 2.14
PHLDA3-201ENST00000367309 WDR43Q15061 677 aaKnown RBP eCLIP28.41■■■□□ 2.14
PHLDA3-201ENST00000367309 FMNL2Q96PY5 1086 aa28.41■■■□□ 2.14
PHLDA3-201ENST00000367309 KCNQ3O43525 872 aa28.4■■■□□ 2.14
PHLDA3-201ENST00000367309 TAF7Q15545 349 aaPredicted RBP28.4■■■□□ 2.14
PHLDA3-201ENST00000367309 TEX13AQ9BXU3 409 aaPredicted RBP28.4■■■□□ 2.14
PHLDA3-201ENST00000367309 ADAMTS8Q9UP79 889 aa28.39■■■□□ 2.14
PHLDA3-201ENST00000367309 STARD3NLO95772 234 aa28.38■■■□□ 2.13
PHLDA3-201ENST00000367309 RFC4P35249 363 aa28.38■■■□□ 2.13
PHLDA3-201ENST00000367309 SOS1Q07889 1333 aaPredicted RBP28.38■■■□□ 2.13
PHLDA3-201ENST00000367309 GOLGB1Q14789 3259 aaKnown RBP28.37■■■□□ 2.13
PHLDA3-201ENST00000367309 C4AP0C0L4 1744 aa28.36■■■□□ 2.13
PHLDA3-201ENST00000367309 TMPOP42166 694 aaKnown RBP28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms