RNA–Protein interactions for RNA: ENST00000366892.5

PRKN-202, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-202ENST00000366892 C5P01031 1676 aa22.75■■□□□ 1.23
PRKN-202ENST00000366892 NFATC2IPQ8NCF5 419 aa22.75■■□□□ 1.23
PRKN-202ENST00000366892 FLAD1Q8NFF5 587 aa22.75■■□□□ 1.23
PRKN-202ENST00000366892 AK7Q96M32 723 aa22.75■■□□□ 1.23
PRKN-202ENST00000366892 TUBGCP6Q96RT7 1819 aa22.74■■□□□ 1.23
PRKN-202ENST00000366892 COL3A1P02461 1466 aaPredicted RBP22.74■■□□□ 1.23
PRKN-202ENST00000366892 U2SURPO15042 1029 aaKnown RBP22.74■■□□□ 1.23
PRKN-202ENST00000366892 POLD1P28340 1107 aa22.74■■□□□ 1.23
PRKN-202ENST00000366892 MTHFSDQ2M296 383 aaKnown RBP22.73■■□□□ 1.23
PRKN-202ENST00000366892 AMIGO3Q86WK7 504 aa22.73■■□□□ 1.23
PRKN-202ENST00000366892 SLC4A9Q96Q91 983 aa22.73■■□□□ 1.23
PRKN-202ENST00000366892 TAF1LQ8IZX4 1826 aa22.73■■□□□ 1.23
PRKN-202ENST00000366892 PPP2R1AP30153 589 aa22.72■■□□□ 1.23
PRKN-202ENST00000366892 RBM42Q9BTD8 480 aaKnown RBP22.72■■□□□ 1.23
PRKN-202ENST00000366892 LGR6Q9HBX8 967 aa22.72■■□□□ 1.23
PRKN-202ENST00000366892 C4BP0C0L5 1744 aa22.71■■□□□ 1.23
PRKN-202ENST00000366892 SMIM5Q71RC9 77 aa22.71■■□□□ 1.23
PRKN-202ENST00000366892 CFAP53Q96M91 514 aa22.71■■□□□ 1.23
PRKN-202ENST00000366892 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.69■■□□□ 1.22
PRKN-202ENST00000366892 DCAF8L1A6NGE4 600 aa22.69■■□□□ 1.22
PRKN-202ENST00000366892 PHF14O94880 888 aa22.68■■□□□ 1.22
PRKN-202ENST00000366892 MSL1Q68DK7 614 aa22.68■■□□□ 1.22
PRKN-202ENST00000366892 GOLGB1Q14789 3259 aaKnown RBP22.68■■□□□ 1.22
PRKN-202ENST00000366892 RNMTO43148 476 aaKnown RBP22.67■■□□□ 1.22
PRKN-202ENST00000366892 PTCD1O75127 700 aaKnown RBP22.67■■□□□ 1.22
PRKN-202ENST00000366892 SSFA2P28290 1259 aa22.67■■□□□ 1.22
PRKN-202ENST00000366892 SLC52A2Q9HAB3 445 aa22.67■■□□□ 1.22
PRKN-202ENST00000366892 MAP3K5Q99683 1374 aa22.67■■□□□ 1.22
PRKN-202ENST00000366892 GNPATO15228 680 aa22.67■■□□□ 1.22
PRKN-202ENST00000366892 COL24A1Q17RW2 1714 aa22.66■■□□□ 1.22
PRKN-202ENST00000366892 NUDCQ9Y266 331 aa22.65■■□□□ 1.22
PRKN-202ENST00000366892 KLHL34Q8N239 644 aa22.64■■□□□ 1.21
PRKN-202ENST00000366892 RC3H1Q5TC82 1133 aaKnown RBP22.63■■□□□ 1.21
PRKN-202ENST00000366892 UBR3Q6ZT12 1888 aa22.63■■□□□ 1.21
PRKN-202ENST00000366892 PHACTR3Q96KR7 559 aa22.62■■□□□ 1.21
PRKN-202ENST00000366892 RSPH6AQ9H0K4 717 aa22.62■■□□□ 1.21
PRKN-202ENST00000366892 SCN11AQ9UI33 1791 aa22.62■■□□□ 1.21
PRKN-202ENST00000366892 CENPBP07199 599 aaPredicted RBP22.62■■□□□ 1.21
PRKN-202ENST00000366892 GAS2L2Q8NHY3 880 aa22.62■■□□□ 1.21
PRKN-202ENST00000366892 RTCBQ9Y3I0 505 aaKnown RBP22.62■■□□□ 1.21
PRKN-202ENST00000366892 U2AF1L5P0DN76 240 aaPredicted RBP22.61■■□□□ 1.21
PRKN-202ENST00000366892 PRKAR2BP31323 418 aa22.61■■□□□ 1.21
PRKN-202ENST00000366892 U2AF1Q01081 240 aaKnown RBP eCLIP22.61■■□□□ 1.21
PRKN-202ENST00000366892 TRAPPC3LQ5T215 181 aa22.61■■□□□ 1.21
PRKN-202ENST00000366892 GNAT3A8MTJ3 354 aa22.6■■□□□ 1.21
PRKN-202ENST00000366892 SLC39A6Q13433 755 aa22.6■■□□□ 1.21
PRKN-202ENST00000366892 ZNF831Q5JPB2 1677 aa22.6■■□□□ 1.21
PRKN-202ENST00000366892 IL17REQ8NFR9 667 aa22.6■■□□□ 1.21
PRKN-202ENST00000366892 CNTNAP4Q9C0A0 1308 aa22.6■■□□□ 1.21
PRKN-202ENST00000366892 RPS6KA4O75676 772 aa22.58■■□□□ 1.21
PRKN-202ENST00000366892 NLGN2Q8NFZ4 835 aa22.58■■□□□ 1.21
PRKN-202ENST00000366892 MRC1P22897 1456 aa22.58■■□□□ 1.2
PRKN-202ENST00000366892 FCHSD2O94868 740 aa22.57■■□□□ 1.2
PRKN-202ENST00000366892 ARHGEF1Q92888 912 aaKnown RBP22.57■■□□□ 1.2
PRKN-202ENST00000366892 DDX10Q13206 875 aaKnown RBP22.57■■□□□ 1.2
PRKN-202ENST00000366892 ADRA2BP18089 450 aa22.56■■□□□ 1.2
PRKN-202ENST00000366892 CRKLP46109 303 aaKnown RBP22.56■■□□□ 1.2
PRKN-202ENST00000366892 ADAMTS7Q9UKP4 1686 aa22.55■■□□□ 1.2
PRKN-202ENST00000366892 YY1P25490 414 aa22.55■■□□□ 1.2
PRKN-202ENST00000366892 DNAJC10Q8IXB1 793 aa22.55■■□□□ 1.2
PRKN-202ENST00000366892 CD2APQ9Y5K6 639 aa22.54■■□□□ 1.2
PRKN-202ENST00000366892 COL5A3P25940 1745 aaPredicted RBP22.54■■□□□ 1.2
PRKN-202ENST00000366892 RFC4P35249 363 aa22.53■■□□□ 1.2
PRKN-202ENST00000366892 TEFQ10587 303 aa22.53■■□□□ 1.2
PRKN-202ENST00000366892 INTS5Q6P9B9 1019 aaKnown RBP22.53■■□□□ 1.2
PRKN-202ENST00000366892 MYH14Q7Z406 1995 aaKnown RBP22.53■■□□□ 1.2
PRKN-202ENST00000366892 GPR162Q16538 588 aa22.52■■□□□ 1.2
PRKN-202ENST00000366892 NLGN1Q8N2Q7 840 aa22.52■■□□□ 1.19
PRKN-202ENST00000366892 CYP19A1P11511 503 aaPredicted RBP22.51■■□□□ 1.19
PRKN-202ENST00000366892 VSIG10Q8N0Z9 540 aa22.51■■□□□ 1.19
PRKN-202ENST00000366892 MMP10P09238 476 aa22.5■■□□□ 1.19
PRKN-202ENST00000366892 GYS1P13807 737 aa22.5■■□□□ 1.19
PRKN-202ENST00000366892 RALBP1Q15311 655 aa22.5■■□□□ 1.19
PRKN-202ENST00000366892 TTC5Q8N0Z6 440 aa22.5■■□□□ 1.19
PRKN-202ENST00000366892 CEMIPQ8WUJ3 1361 aa22.5■■□□□ 1.19
PRKN-202ENST00000366892 KCPQ6ZWJ8 1503 aa22.49■■□□□ 1.19
PRKN-202ENST00000366892 VIRMAQ69YN4 1812 aaKnown RBP22.49■■□□□ 1.19
PRKN-202ENST00000366892 ZNF790Q6PG37 636 aa22.49■■□□□ 1.19
PRKN-202ENST00000366892 PELP1Q8IZL8 1130 aaKnown RBP22.49■■□□□ 1.19
PRKN-202ENST00000366892 CCDC87Q9NVE4 849 aa22.49■■□□□ 1.19
PRKN-202ENST00000366892 TJP1Q07157 1748 aa22.49■■□□□ 1.19
PRKN-202ENST00000366892 CICQ96RK0 1608 aaPredicted RBP22.47■■□□□ 1.19
PRKN-202ENST00000366892 MIER1Q8N108 512 aa22.47■■□□□ 1.19
PRKN-202ENST00000366892 ZNF496Q96IT1 587 aaPredicted RBP22.47■■□□□ 1.19
PRKN-202ENST00000366892 RTF1Q92541 710 aaKnown RBP22.47■■□□□ 1.19
PRKN-202ENST00000366892 MCM10Q7L590 875 aa22.46■■□□□ 1.19
PRKN-202ENST00000366892 SRP68Q9UHB9 627 aaKnown RBP22.46■■□□□ 1.19
PRKN-202ENST00000366892 BTBD11A6QL63 1104 aa22.45■■□□□ 1.18
PRKN-202ENST00000366892 ZBTB1Q9Y2K1 713 aa22.45■■□□□ 1.18
PRKN-202ENST00000366892 USP42Q9H9J4 1324 aaKnown RBP22.45■■□□□ 1.18
PRKN-202ENST00000366892 HTATSF1O43719 755 aaKnown RBP22.44■■□□□ 1.18
PRKN-202ENST00000366892 YBX3P16989 372 aaKnown RBP eCLIP22.44■■□□□ 1.18
PRKN-202ENST00000366892 DCTN1Q14203 1278 aa22.44■■□□□ 1.18
PRKN-202ENST00000366892 PLEKHF1Q96S99 279 aa22.44■■□□□ 1.18
PRKN-202ENST00000366892 SOS1Q07889 1333 aaPredicted RBP22.44■■□□□ 1.18
PRKN-202ENST00000366892 KCNQ3O43525 872 aa22.43■■□□□ 1.18
PRKN-202ENST00000366892 STARD3NLO95772 234 aa22.43■■□□□ 1.18
PRKN-202ENST00000366892 HEG1Q9ULI3 1381 aa22.43■■□□□ 1.18
PRKN-202ENST00000366892 NEFMP07197 916 aa22.42■■□□□ 1.18
PRKN-202ENST00000366892 FKBP8Q14318 412 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms