RNA–Protein interactions for RNA: ENST00000366576.3

MTR-201, Transcript of 5-methyltetrahydrofolate-homocysteine methyltransferase, humanhuman

TSL 1 (best)

Gene MTR, Length 5,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTR-201ENST00000366576 IL27Q8NEV9 243 aa12.59□□□□□ -0.39
MTR-201ENST00000366576 CENPHQ9H3R5 247 aa12.59□□□□□ -0.39
MTR-201ENST00000366576 SYCE3A1L190 88 aa12.59□□□□□ -0.39
MTR-201ENST00000366576 ZC3H6P61129 1189 aaKnown RBP12.59□□□□□ -0.39
MTR-201ENST00000366576 ZNF397Q8NF99 534 aaPredicted RBP12.59□□□□□ -0.39
MTR-201ENST00000366576 TMOD2Q9NZR1 351 aa12.59□□□□□ -0.39
MTR-201ENST00000366576 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.59□□□□□ -0.39
MTR-201ENST00000366576 TAF7Q15545 349 aaPredicted RBP12.58□□□□□ -0.39
MTR-201ENST00000366576 TAX1BP1Q86VP1 789 aa12.58□□□□□ -0.39
MTR-201ENST00000366576 CCDC83Q8IWF9 413 aa12.58□□□□□ -0.39
MTR-201ENST00000366576 RAPGEF3O95398 923 aa12.58□□□□□ -0.4
MTR-201ENST00000366576 CETN2P41208 172 aa12.58□□□□□ -0.4
MTR-201ENST00000366576 ENOX2Q16206 610 aaKnown RBP12.58□□□□□ -0.4
MTR-201ENST00000366576 AMOTQ4VCS5 1084 aa12.58□□□□□ -0.4
MTR-201ENST00000366576 SEPT11Q9NVA2 429 aaKnown RBP12.58□□□□□ -0.4
MTR-201ENST00000366576 PRPF40BQ6NWY9 871 aaKnown RBP12.58□□□□□ -0.4
MTR-201ENST00000366576 ZNF652Q9Y2D9 606 aa12.58□□□□□ -0.4
MTR-201ENST00000366576 ZSCAN12O43309 604 aa12.57□□□□□ -0.4
MTR-201ENST00000366576 CCDC85AQ96PX6 553 aaPredicted RBP12.57□□□□□ -0.4
MTR-201ENST00000366576 USP8P40818 1118 aa12.57□□□□□ -0.4
MTR-201ENST00000366576 THUMPD2Q9BTF0 503 aaKnown RBP12.57□□□□□ -0.4
MTR-201ENST00000366576 NAPBQ9H115 298 aa12.57□□□□□ -0.4
MTR-201ENST00000366576 CCDC148Q8NFR7 591 aa12.57□□□□□ -0.4
MTR-201ENST00000366576 DAPK1P53355 1430 aa12.57□□□□□ -0.4
MTR-201ENST00000366576 BOLA2Q9H3K6 86 aa12.57□□□□□ -0.4
MTR-201ENST00000366576 NUTM2BA6NNL0 878 aaPredicted RBP12.56□□□□□ -0.4
MTR-201ENST00000366576 NUTM2EB1AL46 878 aaPredicted RBP12.56□□□□□ -0.4
MTR-201ENST00000366576 USP5P45974 858 aa12.56□□□□□ -0.4
MTR-201ENST00000366576 PTPN14Q15678 1187 aa12.56□□□□□ -0.4
MTR-201ENST00000366576 CAVIN4Q5BKX8 364 aa12.56□□□□□ -0.4
MTR-201ENST00000366576 JAKMIP3Q5VZ66 844 aa12.56□□□□□ -0.4
MTR-201ENST00000366576 MCM10Q7L590 875 aa12.56□□□□□ -0.4
MTR-201ENST00000366576 NUTM2AQ8IVF1 878 aaPredicted RBP12.56□□□□□ -0.4
MTR-201ENST00000366576 CTCFLQ8NI51 663 aaPredicted RBP12.56□□□□□ -0.4
MTR-201ENST00000366576 C8orf76Q96K31 380 aa12.56□□□□□ -0.4
MTR-201ENST00000366576 PHAXQ9H814 394 aaKnown RBP12.56□□□□□ -0.4
MTR-201ENST00000366576 PPP1R1BQ9UD71 204 aaPredicted RBP12.56□□□□□ -0.4
MTR-201ENST00000366576 POLA1P09884 1462 aaPredicted RBP12.56□□□□□ -0.4
MTR-201ENST00000366576 CCDC183Q5T5S1 534 aa12.56□□□□□ -0.4
MTR-201ENST00000366576 POGZQ7Z3K3 1410 aa12.56□□□□□ -0.4
MTR-201ENST00000366576 PLEKHH1Q9ULM0 1364 aa12.56□□□□□ -0.4
MTR-201ENST00000366576 CTAGE5O15320 804 aa12.56□□□□□ -0.4
MTR-201ENST00000366576 CCDC102AQ96A19 550 aa12.56□□□□□ -0.4
MTR-201ENST00000366576 CRACR2AQ9BSW2 395 aa12.56□□□□□ -0.4
MTR-201ENST00000366576 POTEJP0CG39 1038 aa12.56□□□□□ -0.4
MTR-201ENST00000366576 PTCD1O75127 700 aaKnown RBP12.55□□□□□ -0.4
MTR-201ENST00000366576 MAP3K12Q12852 859 aa12.55□□□□□ -0.4
MTR-201ENST00000366576 SPA17Q15506 151 aa12.55□□□□□ -0.4
MTR-201ENST00000366576 RAB34Q9BZG1 259 aa12.55□□□□□ -0.4
MTR-201ENST00000366576 SEC63Q9UGP8 760 aaKnown RBP12.55□□□□□ -0.4
MTR-201ENST00000366576 PRXQ9BXM0 1461 aa12.55□□□□□ -0.4
MTR-201ENST00000366576 MPHOSPH10O00566 681 aaKnown RBP12.55□□□□□ -0.4
MTR-201ENST00000366576 TMCO3Q6UWJ1 677 aa12.55□□□□□ -0.4
MTR-201ENST00000366576 IQCA1Q86XH1 822 aa12.55□□□□□ -0.4
MTR-201ENST00000366576 KIF18AQ8NI77 898 aa12.55□□□□□ -0.4
MTR-201ENST00000366576 MIS18AQ9NYP9 233 aa12.55□□□□□ -0.4
MTR-201ENST00000366576 LIMCH1Q9UPQ0 1083 aa12.55□□□□□ -0.4
MTR-201ENST00000366576 MKNK2Q9HBH9 465 aa12.55□□□□□ -0.4
MTR-201ENST00000366576 PIBF1Q8WXW3 757 aa12.55□□□□□ -0.4
MTR-201ENST00000366576 MINDY4BA8MYZ0 360 aa12.54□□□□□ -0.4
MTR-201ENST00000366576 IFIT5Q13325 482 aaKnown RBP12.54□□□□□ -0.4
MTR-201ENST00000366576 HSP90AB3PQ58FF7 597 aa12.54□□□□□ -0.4
MTR-201ENST00000366576 FKBP15Q5T1M5 1219 aa12.54□□□□□ -0.4
MTR-201ENST00000366576 VPS36Q86VN1 386 aa12.54□□□□□ -0.4
MTR-201ENST00000366576 RNF41Q9H4P4 317 aaPredicted RBP12.54□□□□□ -0.4
MTR-201ENST00000366576 RRP9O43818 475 aaKnown RBP12.54□□□□□ -0.4
MTR-201ENST00000366576 CAMK4Q16566 473 aa12.54□□□□□ -0.4
MTR-201ENST00000366576 DNAAF4Q8WXU2 420 aa12.54□□□□□ -0.4
MTR-201ENST00000366576 DBF4Q9UBU7 674 aaPredicted RBP12.54□□□□□ -0.4
MTR-201ENST00000366576 TNIP1Q15025 636 aa12.54□□□□□ -0.4
MTR-201ENST00000366576 KIF20AO95235 890 aa12.53□□□□□ -0.4
MTR-201ENST00000366576 FGFR1OPO95684 399 aaKnown RBP12.53□□□□□ -0.4
MTR-201ENST00000366576 POLR3DP05423 398 aaPredicted RBP12.53□□□□□ -0.4
MTR-201ENST00000366576 FAM193AP78312 1265 aa12.53□□□□□ -0.4
MTR-201ENST00000366576 BICDL1Q6ZP65 573 aa12.53□□□□□ -0.4
MTR-201ENST00000366576 ZNF213O14771 459 aa12.53□□□□□ -0.4
MTR-201ENST00000366576 SMARCA5O60264 1052 aaPredicted RBP12.53□□□□□ -0.4
MTR-201ENST00000366576 KIF5CO60282 957 aa12.53□□□□□ -0.4
MTR-201ENST00000366576 TOP1P11387 765 aaKnown RBP12.53□□□□□ -0.4
MTR-201ENST00000366576 GBP2P32456 591 aaPredicted RBP12.53□□□□□ -0.4
MTR-201ENST00000366576 TMOD3Q9NYL9 352 aa12.53□□□□□ -0.4
MTR-201ENST00000366576 XPCQ01831 940 aaPredicted RBP12.53□□□□□ -0.4
MTR-201ENST00000366576 SPINK5Q9NQ38 1064 aaPredicted RBP12.53□□□□□ -0.4
MTR-201ENST00000366576 MAP9Q49MG5 647 aa12.52□□□□□ -0.4
MTR-201ENST00000366576 MYD88Q99836 296 aa12.52□□□□□ -0.4
MTR-201ENST00000366576 PLCD4Q9BRC7 762 aa12.52□□□□□ -0.4
MTR-201ENST00000366576 DDX19AQ9NUU7 478 aaKnown RBP12.52□□□□□ -0.4
MTR-201ENST00000366576 NAIPQ13075 1403 aa12.52□□□□□ -0.4
MTR-201ENST00000366576 NKTRP30414 1462 aaKnown RBP12.52□□□□□ -0.41
MTR-201ENST00000366576 TRIM21P19474 475 aaKnown RBP12.52□□□□□ -0.41
MTR-201ENST00000366576 KLHL10Q6JEL2 608 aa12.52□□□□□ -0.41
MTR-201ENST00000366576 CACNA2D4Q7Z3S7 1137 aa12.52□□□□□ -0.41
MTR-201ENST00000366576 HYPKQ9NX55 129 aa12.52□□□□□ -0.41
MTR-201ENST00000366576 KIF4BQ2VIQ3 1234 aa12.52□□□□□ -0.41
MTR-201ENST00000366576 TSG101Q99816 390 aa12.52□□□□□ -0.41
MTR-201ENST00000366576 NEMFO60524 1076 aa12.52□□□□□ -0.41
MTR-201ENST00000366576 ECHDC1Q9NTX5 307 aa12.51□□□□□ -0.41
MTR-201ENST00000366576 PTPRCP08575 1304 aa12.51□□□□□ -0.41
MTR-201ENST00000366576 CRACR2BQ8N4Y2 399 aaPredicted RBP12.51□□□□□ -0.41
MTR-201ENST00000366576 SLC12A7Q9Y666 1083 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms