RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 ATG3Q9NT62 314 aa13.97□□□□□ -0.17
YBX3-203ENST00000366286 C4AP0C0L4 1744 aa13.96□□□□□ -0.17
YBX3-203ENST00000366286 U2SURPO15042 1029 aaKnown RBP13.96□□□□□ -0.17
YBX3-203ENST00000366286 PPP2R1AP30153 589 aa13.96□□□□□ -0.17
YBX3-203ENST00000366286 MYH14Q7Z406 1995 aaKnown RBP13.96□□□□□ -0.18
YBX3-203ENST00000366286 AKAP4Q5JQC9 854 aa13.95□□□□□ -0.18
YBX3-203ENST00000366286 CFAP53Q96M91 514 aa13.95□□□□□ -0.18
YBX3-203ENST00000366286 DLG5Q8TDM6 1919 aa13.95□□□□□ -0.18
YBX3-203ENST00000366286 CABP4P57796 275 aa13.94□□□□□ -0.18
YBX3-203ENST00000366286 ITPK1Q13572 414 aa13.94□□□□□ -0.18
YBX3-203ENST00000366286 COL23A1Q86Y22 540 aaPredicted RBP13.94□□□□□ -0.18
YBX3-203ENST00000366286 LINC00116Q8NCU8 138 aa13.94□□□□□ -0.18
YBX3-203ENST00000366286 SLC16A10Q8TF71 515 aa13.94□□□□□ -0.18
YBX3-203ENST00000366286 AK7Q96M32 723 aa13.94□□□□□ -0.18
YBX3-203ENST00000366286 MSH5O43196 834 aa13.93□□□□□ -0.18
YBX3-203ENST00000366286 HMGB2P26583 209 aaKnown RBP13.93□□□□□ -0.18
YBX3-203ENST00000366286 ATP6V1AP38606 617 aa13.93□□□□□ -0.18
YBX3-203ENST00000366286 MTHFSDQ2M296 383 aaKnown RBP13.93□□□□□ -0.18
YBX3-203ENST00000366286 KCPQ6ZWJ8 1503 aa13.92□□□□□ -0.18
YBX3-203ENST00000366286 AMIGO3Q86WK7 504 aa13.92□□□□□ -0.18
YBX3-203ENST00000366286 SLC4A9Q96Q91 983 aa13.92□□□□□ -0.18
YBX3-203ENST00000366286 FHDC1Q9C0D6 1143 aaPredicted RBP13.92□□□□□ -0.18
YBX3-203ENST00000366286 RNMTO43148 476 aaKnown RBP13.91□□□□□ -0.18
YBX3-203ENST00000366286 NFATC2IPQ8NCF5 419 aa13.91□□□□□ -0.18
YBX3-203ENST00000366286 ARXQ96QS3 562 aa13.91□□□□□ -0.18
YBX3-203ENST00000366286 RBM42Q9BTD8 480 aaKnown RBP13.91□□□□□ -0.18
YBX3-203ENST00000366286 MAP3K5Q99683 1374 aa13.91□□□□□ -0.18
YBX3-203ENST00000366286 PHF14O94880 888 aa13.9□□□□□ -0.18
YBX3-203ENST00000366286 MSL1Q68DK7 614 aa13.9□□□□□ -0.18
YBX3-203ENST00000366286 SMIM5Q71RC9 77 aa13.9□□□□□ -0.18
YBX3-203ENST00000366286 FLAD1Q8NFF5 587 aa13.9□□□□□ -0.18
YBX3-203ENST00000366286 RSPH6AQ9H0K4 717 aa13.9□□□□□ -0.18
YBX3-203ENST00000366286 SLC52A2Q9HAB3 445 aa13.9□□□□□ -0.18
YBX3-203ENST00000366286 LGR6Q9HBX8 967 aa13.9□□□□□ -0.18
YBX3-203ENST00000366286 GNPATO15228 680 aa13.89□□□□□ -0.19
YBX3-203ENST00000366286 POLD1P28340 1107 aa13.89□□□□□ -0.19
YBX3-203ENST00000366286 PRKAR2BP31323 418 aa13.89□□□□□ -0.19
YBX3-203ENST00000366286 GAS2L2Q8NHY3 880 aa13.89□□□□□ -0.19
YBX3-203ENST00000366286 NUDCQ9Y266 331 aa13.89□□□□□ -0.19
YBX3-203ENST00000366286 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.88□□□□□ -0.19
YBX3-203ENST00000366286 PTCD1O75127 700 aaKnown RBP13.88□□□□□ -0.19
YBX3-203ENST00000366286 U2AF1L5P0DN76 240 aaPredicted RBP13.88□□□□□ -0.19
YBX3-203ENST00000366286 SSFA2P28290 1259 aa13.88□□□□□ -0.19
YBX3-203ENST00000366286 U2AF1Q01081 240 aaKnown RBP eCLIP13.88□□□□□ -0.19
YBX3-203ENST00000366286 CNTNAP4Q9C0A0 1308 aa13.88□□□□□ -0.19
YBX3-203ENST00000366286 DDX10Q13206 875 aaKnown RBP13.87□□□□□ -0.19
YBX3-203ENST00000366286 PHACTR3Q96KR7 559 aa13.87□□□□□ -0.19
YBX3-203ENST00000366286 SYT17Q9BSW7 474 aa13.87□□□□□ -0.19
YBX3-203ENST00000366286 CHD4Q14839 1912 aa13.87□□□□□ -0.19
YBX3-203ENST00000366286 KIF13BQ9NQT8 1826 aa13.86□□□□□ -0.19
YBX3-203ENST00000366286 GNAT3A8MTJ3 354 aa13.86□□□□□ -0.19
YBX3-203ENST00000366286 KLHL34Q8N239 644 aa13.86□□□□□ -0.19
YBX3-203ENST00000366286 SLC39A6Q13433 755 aa13.85□□□□□ -0.19
YBX3-203ENST00000366286 CEMIPQ8WUJ3 1361 aa13.84□□□□□ -0.19
YBX3-203ENST00000366286 RC3H1Q5TC82 1133 aaKnown RBP13.84□□□□□ -0.19
YBX3-203ENST00000366286 RTCBQ9Y3I0 505 aaKnown RBP13.84□□□□□ -0.19
YBX3-203ENST00000366286 FCHSD2O94868 740 aa13.83□□□□□ -0.2
YBX3-203ENST00000366286 CRKLP46109 303 aaKnown RBP13.83□□□□□ -0.2
YBX3-203ENST00000366286 IL17REQ8NFR9 667 aa13.83□□□□□ -0.2
YBX3-203ENST00000366286 KIAA1551Q9HCM1 1747 aa13.83□□□□□ -0.2
YBX3-203ENST00000366286 KDM3BQ7LBC6 1761 aa13.83□□□□□ -0.2
YBX3-203ENST00000366286 LAMB4A4D0S4 1761 aa13.82□□□□□ -0.2
YBX3-203ENST00000366286 DCAF8L1A6NGE4 600 aa13.82□□□□□ -0.2
YBX3-203ENST00000366286 TEFQ10587 303 aa13.82□□□□□ -0.2
YBX3-203ENST00000366286 RALBP1Q15311 655 aa13.82□□□□□ -0.2
YBX3-203ENST00000366286 DNAJC10Q8IXB1 793 aa13.82□□□□□ -0.2
YBX3-203ENST00000366286 SCN7AQ01118 1682 aa13.82□□□□□ -0.2
YBX3-203ENST00000366286 N4BP2Q86UW6 1770 aaPredicted RBP13.81□□□□□ -0.2
YBX3-203ENST00000366286 RPS6KA4O75676 772 aa13.81□□□□□ -0.2
YBX3-203ENST00000366286 ADRA2BP18089 450 aa13.81□□□□□ -0.2
YBX3-203ENST00000366286 NLGN2Q8NFZ4 835 aa13.81□□□□□ -0.2
YBX3-203ENST00000366286 ZEB1P37275 1124 aaPredicted RBP13.8□□□□□ -0.2
YBX3-203ENST00000366286 TRAPPC3LQ5T215 181 aa13.8□□□□□ -0.2
YBX3-203ENST00000366286 TTC5Q8N0Z6 440 aa13.8□□□□□ -0.2
YBX3-203ENST00000366286 ARHGEF1Q92888 912 aaKnown RBP13.8□□□□□ -0.2
YBX3-203ENST00000366286 MYBBP1AQ9BQG0 1328 aaKnown RBP13.8□□□□□ -0.2
YBX3-203ENST00000366286 BCORQ6W2J9 1755 aa13.8□□□□□ -0.2
YBX3-203ENST00000366286 BRCA1P38398 1863 aaKnown RBP13.8□□□□□ -0.2
YBX3-203ENST00000366286 AFDNP55196 1824 aaKnown RBP13.79□□□□□ -0.2
YBX3-203ENST00000366286 INTS5Q6P9B9 1019 aaKnown RBP13.79□□□□□ -0.2
YBX3-203ENST00000366286 MCM10Q7L590 875 aa13.79□□□□□ -0.2
YBX3-203ENST00000366286 CCDC87Q9NVE4 849 aa13.79□□□□□ -0.2
YBX3-203ENST00000366286 HEG1Q9ULI3 1381 aa13.79□□□□□ -0.2
YBX3-203ENST00000366286 CYP19A1P11511 503 aaPredicted RBP13.78□□□□□ -0.2
YBX3-203ENST00000366286 RFC4P35249 363 aa13.78□□□□□ -0.2
YBX3-203ENST00000366286 ZNF790Q6PG37 636 aa13.78□□□□□ -0.2
YBX3-203ENST00000366286 VSIG10Q8N0Z9 540 aa13.78□□□□□ -0.2
YBX3-203ENST00000366286 ZNF496Q96IT1 587 aaPredicted RBP13.78□□□□□ -0.2
YBX3-203ENST00000366286 PLEKHF1Q96S99 279 aa13.78□□□□□ -0.2
YBX3-203ENST00000366286 SOS1Q07889 1333 aaPredicted RBP13.78□□□□□ -0.2
YBX3-203ENST00000366286 MMP10P09238 476 aa13.77□□□□□ -0.21
YBX3-203ENST00000366286 GYS1P13807 737 aa13.77□□□□□ -0.21
YBX3-203ENST00000366286 COL15A1P39059 1388 aa13.77□□□□□ -0.21
YBX3-203ENST00000366286 DCTN1Q14203 1278 aa13.77□□□□□ -0.21
YBX3-203ENST00000366286 RTF1Q92541 710 aaKnown RBP13.77□□□□□ -0.21
YBX3-203ENST00000366286 USP42Q9H9J4 1324 aaKnown RBP13.77□□□□□ -0.21
YBX3-203ENST00000366286 NRXN2Q9P2S2 1712 aa13.76□□□□□ -0.21
YBX3-203ENST00000366286 C10orf71Q711Q0 1435 aa13.76□□□□□ -0.21
YBX3-203ENST00000366286 KCNQ3O43525 872 aa13.76□□□□□ -0.21
YBX3-203ENST00000366286 NEFMP07197 916 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 629.7 ms