RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 POLD1P28340 1107 aa18.57■□□□□ 0.56
TNFRSF1A-202ENST00000366159 SLC4A9Q96Q91 983 aa18.57■□□□□ 0.56
TNFRSF1A-202ENST00000366159 COL3A1P02461 1466 aaPredicted RBP18.57■□□□□ 0.56
TNFRSF1A-202ENST00000366159 GOLGB1Q14789 3259 aaKnown RBP18.55■□□□□ 0.56
TNFRSF1A-202ENST00000366159 DCAF8L1A6NGE4 600 aa18.54■□□□□ 0.56
TNFRSF1A-202ENST00000366159 ATP6V1AP38606 617 aa18.54■□□□□ 0.56
TNFRSF1A-202ENST00000366159 AK7Q96M32 723 aa18.54■□□□□ 0.56
TNFRSF1A-202ENST00000366159 MSH5O43196 834 aa18.53■□□□□ 0.56
TNFRSF1A-202ENST00000366159 DIAPH1O60610 1272 aaKnown RBP18.53■□□□□ 0.56
TNFRSF1A-202ENST00000366159 SSFA2P28290 1259 aa18.53■□□□□ 0.56
TNFRSF1A-202ENST00000366159 C1orf141Q5JVX7 400 aa18.53■□□□□ 0.56
TNFRSF1A-202ENST00000366159 SMIM5Q71RC9 77 aa18.53■□□□□ 0.56
TNFRSF1A-202ENST00000366159 SCN11AQ9UI33 1791 aa18.53■□□□□ 0.56
TNFRSF1A-202ENST00000366159 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.52■□□□□ 0.56
TNFRSF1A-202ENST00000366159 CABP4P57796 275 aa18.52■□□□□ 0.56
TNFRSF1A-202ENST00000366159 AKAP4Q5JQC9 854 aa18.52■□□□□ 0.56
TNFRSF1A-202ENST00000366159 HMOX1P09601 288 aa18.51■□□□□ 0.55
TNFRSF1A-202ENST00000366159 YY1P25490 414 aa18.51■□□□□ 0.55
TNFRSF1A-202ENST00000366159 MSL1Q68DK7 614 aa18.51■□□□□ 0.55
TNFRSF1A-202ENST00000366159 NFATC2IPQ8NCF5 419 aa18.51■□□□□ 0.55
TNFRSF1A-202ENST00000366159 COL5A3P25940 1745 aaPredicted RBP18.51■□□□□ 0.55
TNFRSF1A-202ENST00000366159 ADAMTS7Q9UKP4 1686 aa18.51■□□□□ 0.55
TNFRSF1A-202ENST00000366159 RC3H1Q5TC82 1133 aaKnown RBP18.49■□□□□ 0.55
TNFRSF1A-202ENST00000366159 NLGN2Q8NFZ4 835 aa18.49■□□□□ 0.55
TNFRSF1A-202ENST00000366159 LGR6Q9HBX8 967 aa18.49■□□□□ 0.55
TNFRSF1A-202ENST00000366159 CICQ96RK0 1608 aaPredicted RBP18.49■□□□□ 0.55
TNFRSF1A-202ENST00000366159 PHF14O94880 888 aa18.49■□□□□ 0.55
TNFRSF1A-202ENST00000366159 MTHFSDQ2M296 383 aaKnown RBP18.49■□□□□ 0.55
TNFRSF1A-202ENST00000366159 RBM42Q9BTD8 480 aaKnown RBP18.49■□□□□ 0.55
TNFRSF1A-202ENST00000366159 MRC1P22897 1456 aa18.48■□□□□ 0.55
TNFRSF1A-202ENST00000366159 GNPATO15228 680 aa18.48■□□□□ 0.55
TNFRSF1A-202ENST00000366159 CNTNAP4Q9C0A0 1308 aa18.47■□□□□ 0.55
TNFRSF1A-202ENST00000366159 RNMTO43148 476 aaKnown RBP18.47■□□□□ 0.55
TNFRSF1A-202ENST00000366159 SLC52A2Q9HAB3 445 aa18.47■□□□□ 0.55
TNFRSF1A-202ENST00000366159 MYH14Q7Z406 1995 aaKnown RBP18.46■□□□□ 0.55
TNFRSF1A-202ENST00000366159 CD2APQ9Y5K6 639 aa18.46■□□□□ 0.55
TNFRSF1A-202ENST00000366159 VIRMAQ69YN4 1812 aaKnown RBP18.45■□□□□ 0.54
TNFRSF1A-202ENST00000366159 TJP1Q07157 1748 aa18.45■□□□□ 0.54
TNFRSF1A-202ENST00000366159 CNGB1Q14028 1251 aaPredicted RBP18.45■□□□□ 0.54
TNFRSF1A-202ENST00000366159 KLHL34Q8N239 644 aa18.45■□□□□ 0.54
TNFRSF1A-202ENST00000366159 PTCD1O75127 700 aaKnown RBP18.44■□□□□ 0.54
TNFRSF1A-202ENST00000366159 RPS6KA4O75676 772 aa18.44■□□□□ 0.54
TNFRSF1A-202ENST00000366159 RTCBQ9Y3I0 505 aaKnown RBP18.44■□□□□ 0.54
TNFRSF1A-202ENST00000366159 PPP2R1AP30153 589 aa18.43■□□□□ 0.54
TNFRSF1A-202ENST00000366159 TRAPPC3LQ5T215 181 aa18.43■□□□□ 0.54
TNFRSF1A-202ENST00000366159 ARHGEF1Q92888 912 aaKnown RBP18.43■□□□□ 0.54
TNFRSF1A-202ENST00000366159 CHD4Q14839 1912 aa18.43■□□□□ 0.54
TNFRSF1A-202ENST00000366159 GPR162Q16538 588 aa18.42■□□□□ 0.54
TNFRSF1A-202ENST00000366159 U2SURPO15042 1029 aaKnown RBP18.41■□□□□ 0.54
TNFRSF1A-202ENST00000366159 KCPQ6ZWJ8 1503 aa18.41■□□□□ 0.54
TNFRSF1A-202ENST00000366159 YBX3P16989 372 aaKnown RBP eCLIP18.4■□□□□ 0.54
TNFRSF1A-202ENST00000366159 CRKLP46109 303 aaKnown RBP18.4■□□□□ 0.54
TNFRSF1A-202ENST00000366159 C4AP0C0L4 1744 aa18.39■□□□□ 0.53
TNFRSF1A-202ENST00000366159 GYS1P13807 737 aa18.39■□□□□ 0.53
TNFRSF1A-202ENST00000366159 SLC39A6Q13433 755 aa18.39■□□□□ 0.53
TNFRSF1A-202ENST00000366159 INTS5Q6P9B9 1019 aaKnown RBP18.39■□□□□ 0.53
TNFRSF1A-202ENST00000366159 IL17REQ8NFR9 667 aa18.39■□□□□ 0.53
TNFRSF1A-202ENST00000366159 RSPH6AQ9H0K4 717 aa18.39■□□□□ 0.53
TNFRSF1A-202ENST00000366159 NLGN1Q8N2Q7 840 aa18.38■□□□□ 0.53
TNFRSF1A-202ENST00000366159 GAS2L2Q8NHY3 880 aa18.38■□□□□ 0.53
TNFRSF1A-202ENST00000366159 PHACTR3Q96KR7 559 aa18.38■□□□□ 0.53
TNFRSF1A-202ENST00000366159 CFAP53Q96M91 514 aa18.38■□□□□ 0.53
TNFRSF1A-202ENST00000366159 UBR2Q8IWV8 1755 aa18.38■□□□□ 0.53
TNFRSF1A-202ENST00000366159 MMP10P09238 476 aa18.37■□□□□ 0.53
TNFRSF1A-202ENST00000366159 DNAJC10Q8IXB1 793 aa18.37■□□□□ 0.53
TNFRSF1A-202ENST00000366159 KIF13BQ9NQT8 1826 aa18.37■□□□□ 0.53
TNFRSF1A-202ENST00000366159 SIPA1L3O60292 1781 aaPredicted RBP18.37■□□□□ 0.53
TNFRSF1A-202ENST00000366159 GNAT3A8MTJ3 354 aa18.36■□□□□ 0.53
TNFRSF1A-202ENST00000366159 VSIG10Q8N0Z9 540 aa18.36■□□□□ 0.53
TNFRSF1A-202ENST00000366159 ZNF784Q8NCA9 323 aaPredicted RBP18.36■□□□□ 0.53
TNFRSF1A-202ENST00000366159 CEMIPQ8WUJ3 1361 aa18.35■□□□□ 0.53
TNFRSF1A-202ENST00000366159 GRIN3BO60391 1043 aa18.35■□□□□ 0.53
TNFRSF1A-202ENST00000366159 CYP19A1P11511 503 aaPredicted RBP18.35■□□□□ 0.53
TNFRSF1A-202ENST00000366159 PRKAR2BP31323 418 aa18.35■□□□□ 0.53
TNFRSF1A-202ENST00000366159 RFC4P35249 363 aa18.35■□□□□ 0.53
TNFRSF1A-202ENST00000366159 KIAA1551Q9HCM1 1747 aa18.34■□□□□ 0.53
TNFRSF1A-202ENST00000366159 CCDC87Q9NVE4 849 aa18.34■□□□□ 0.53
TNFRSF1A-202ENST00000366159 NUDCQ9Y266 331 aa18.34■□□□□ 0.53
TNFRSF1A-202ENST00000366159 USP42Q9H9J4 1324 aaKnown RBP18.33■□□□□ 0.53
TNFRSF1A-202ENST00000366159 FCHSD2O94868 740 aa18.33■□□□□ 0.53
TNFRSF1A-202ENST00000366159 PELP1Q8IZL8 1130 aaKnown RBP18.33■□□□□ 0.53
TNFRSF1A-202ENST00000366159 SOS1Q07889 1333 aaPredicted RBP18.32■□□□□ 0.52
TNFRSF1A-202ENST00000366159 C10orf71Q711Q0 1435 aa18.31■□□□□ 0.52
TNFRSF1A-202ENST00000366159 ZNF790Q6PG37 636 aa18.31■□□□□ 0.52
TNFRSF1A-202ENST00000366159 SRP68Q9UHB9 627 aaKnown RBP18.31■□□□□ 0.52
TNFRSF1A-202ENST00000366159 PXDNLA1KZ92 1463 aa18.31■□□□□ 0.52
TNFRSF1A-202ENST00000366159 U2AF1L5P0DN76 240 aaPredicted RBP18.3■□□□□ 0.52
TNFRSF1A-202ENST00000366159 U2AF1Q01081 240 aaKnown RBP eCLIP18.3■□□□□ 0.52
TNFRSF1A-202ENST00000366159 FKBP8Q14318 412 aa18.3■□□□□ 0.52
TNFRSF1A-202ENST00000366159 TM4SF1P30408 202 aa18.29■□□□□ 0.52
TNFRSF1A-202ENST00000366159 TGFB2P61812 414 aa18.29■□□□□ 0.52
TNFRSF1A-202ENST00000366159 TEFQ10587 303 aa18.29■□□□□ 0.52
TNFRSF1A-202ENST00000366159 ZNF496Q96IT1 587 aaPredicted RBP18.29■□□□□ 0.52
TNFRSF1A-202ENST00000366159 ZBTB1Q9Y2K1 713 aa18.29■□□□□ 0.52
TNFRSF1A-202ENST00000366159 HEG1Q9ULI3 1381 aa18.27■□□□□ 0.52
TNFRSF1A-202ENST00000366159 DDR1Q08345 913 aa18.27■□□□□ 0.52
TNFRSF1A-202ENST00000366159 TTC5Q8N0Z6 440 aa18.27■□□□□ 0.52
TNFRSF1A-202ENST00000366159 NARFQ9UHQ1 456 aa18.27■□□□□ 0.52
TNFRSF1A-202ENST00000366159 PARP3Q9Y6F1 533 aa18.27■□□□□ 0.52
TNFRSF1A-202ENST00000366159 COL15A1P39059 1388 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms