RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 SCARF2Q96GP6 870 aaPredicted RBP5.71□□□□□ -1.5
RNU4-42P-201ENST00000364738 ENAMQ9NRM1 1142 aa5.71□□□□□ -1.5
RNU4-42P-201ENST00000364738 HRH3Q9Y5N1 445 aa5.71□□□□□ -1.5
RNU4-42P-201ENST00000364738 STAU1O95793 577 aaKnown RBP5.7□□□□□ -1.5
RNU4-42P-201ENST00000364738 USP4Q13107 963 aa5.7□□□□□ -1.5
RNU4-42P-201ENST00000364738 TSGA10IPQ3SY00 556 aa5.7□□□□□ -1.5
RNU4-42P-201ENST00000364738 PHTF2Q8N3S3 785 aa5.7□□□□□ -1.5
RNU4-42P-201ENST00000364738 XAGE2Q96GT9 111 aa5.7□□□□□ -1.5
RNU4-42P-201ENST00000364738 FHDC1Q9C0D6 1143 aaPredicted RBP5.7□□□□□ -1.5
RNU4-42P-201ENST00000364738 ETNK1Q9HBU6 452 aa5.7□□□□□ -1.5
RNU4-42P-201ENST00000364738 NSFL1CQ9UNZ2 370 aaKnown RBP5.7□□□□□ -1.5
RNU4-42P-201ENST00000364738 BCRP11274 1271 aa5.69□□□□□ -1.5
RNU4-42P-201ENST00000364738 TLR1Q15399 786 aa5.69□□□□□ -1.5
RNU4-42P-201ENST00000364738 C4orf17Q53FE4 359 aa5.69□□□□□ -1.5
RNU4-42P-201ENST00000364738 KANK3Q6NY19 840 aa5.69□□□□□ -1.5
RNU4-42P-201ENST00000364738 NEDD1Q8NHV4 660 aa5.69□□□□□ -1.5
RNU4-42P-201ENST00000364738 SIRT1Q96EB6 747 aa5.69□□□□□ -1.5
RNU4-42P-201ENST00000364738 DNMT3AQ9Y6K1 912 aaPredicted RBP5.69□□□□□ -1.5
RNU4-42P-201ENST00000364738 THBS1P07996 1170 aa5.68□□□□□ -1.5
RNU4-42P-201ENST00000364738 CSB-PGBD3P0DP91 1061 aa5.68□□□□□ -1.5
RNU4-42P-201ENST00000364738 MCM6Q14566 821 aa5.68□□□□□ -1.5
RNU4-42P-201ENST00000364738 WASHC4Q2M389 1173 aa5.68□□□□□ -1.5
RNU4-42P-201ENST00000364738 PGBD3Q8N328 593 aa5.68□□□□□ -1.5
RNU4-42P-201ENST00000364738 RHBDD1Q8TEB9 315 aa5.68□□□□□ -1.5
RNU4-42P-201ENST00000364738 ACDQ96AP0 544 aa5.68□□□□□ -1.5
RNU4-42P-201ENST00000364738 RUBCNLQ9H714 662 aa5.68□□□□□ -1.5
RNU4-42P-201ENST00000364738 PHF24Q9UPV7 400 aa5.68□□□□□ -1.5
RNU4-42P-201ENST00000364738 MSX1P28360 303 aa5.67□□□□□ -1.5
RNU4-42P-201ENST00000364738 MAP2K3P46734 347 aa5.67□□□□□ -1.5
RNU4-42P-201ENST00000364738 SEMA3FQ13275 785 aa5.67□□□□□ -1.5
RNU4-42P-201ENST00000364738 EFHC2Q5JST6 749 aa5.67□□□□□ -1.5
RNU4-42P-201ENST00000364738 PODNQ7Z5L7 613 aa5.67□□□□□ -1.5
RNU4-42P-201ENST00000364738 CHIC2Q9UKJ5 165 aa5.67□□□□□ -1.5
RNU4-42P-201ENST00000364738 PHF20L1A8MW92 1017 aa5.66□□□□□ -1.5
RNU4-42P-201ENST00000364738 SOX11P35716 441 aa5.66□□□□□ -1.5
RNU4-42P-201ENST00000364738 PLA2G4AP47712 749 aa5.66□□□□□ -1.5
RNU4-42P-201ENST00000364738 SCNN1DP51172 638 aa5.66□□□□□ -1.5
RNU4-42P-201ENST00000364738 GDF10P55107 478 aa5.66□□□□□ -1.5
RNU4-42P-201ENST00000364738 LBRQ14739 615 aaKnown RBP5.66□□□□□ -1.5
RNU4-42P-201ENST00000364738 MAP7D1Q3KQU3 841 aa5.66□□□□□ -1.5
RNU4-42P-201ENST00000364738 GPAT2Q6NUI2 795 aa5.66□□□□□ -1.5
RNU4-42P-201ENST00000364738 PPARGC1BQ86YN6 1023 aaKnown RBP5.66□□□□□ -1.5
RNU4-42P-201ENST00000364738 PLPP7Q8NBV4 271 aa5.66□□□□□ -1.5
RNU4-42P-201ENST00000364738 CFHR5Q9BXR6 569 aa5.66□□□□□ -1.5
RNU4-42P-201ENST00000364738 OXCT2Q9BYC2 517 aaPredicted RBP5.66□□□□□ -1.5
RNU4-42P-201ENST00000364738 INHAP05111 366 aa5.65□□□□□ -1.5
RNU4-42P-201ENST00000364738 TBC1D9Q6ZT07 1266 aa5.65□□□□□ -1.5
RNU4-42P-201ENST00000364738 LRRC4BQ9NT99 713 aa5.65□□□□□ -1.5
RNU4-42P-201ENST00000364738 CNTNAP5Q8WYK1 1306 aa5.65□□□□□ -1.51
RNU4-42P-201ENST00000364738 OIP5O43482 229 aa5.64□□□□□ -1.51
RNU4-42P-201ENST00000364738 UBAP2LQ14157 1087 aaKnown RBP5.64□□□□□ -1.51
RNU4-42P-201ENST00000364738 BEND7Q8N7W2 519 aaPredicted RBP5.64□□□□□ -1.51
RNU4-42P-201ENST00000364738 ATXN7L1Q9ULK2 861 aaPredicted RBP5.64□□□□□ -1.51
RNU4-42P-201ENST00000364738 PIK3CDO00329 1044 aa5.63□□□□□ -1.51
RNU4-42P-201ENST00000364738 IGHA1P01876 353 aa5.63□□□□□ -1.51
RNU4-42P-201ENST00000364738 BMP4P12644 408 aa5.63□□□□□ -1.51
RNU4-42P-201ENST00000364738 FOXK2Q01167 660 aa5.63□□□□□ -1.51
RNU4-42P-201ENST00000364738 ABHD17AQ96GS6 310 aa5.63□□□□□ -1.51
RNU4-42P-201ENST00000364738 NIFKQ9BYG3 293 aaKnown RBP5.63□□□□□ -1.51
RNU4-42P-201ENST00000364738 CRISPLD1Q9H336 500 aa5.63□□□□□ -1.51
RNU4-42P-201ENST00000364738 GDF2Q9UK05 429 aaPredicted RBP5.63□□□□□ -1.51
RNU4-42P-201ENST00000364738 COG6Q9Y2V7 657 aa5.63□□□□□ -1.51
RNU4-42P-201ENST00000364738 PRKCSHP14314 528 aaPredicted RBP5.62□□□□□ -1.51
RNU4-42P-201ENST00000364738 ATP4AP20648 1035 aa5.62□□□□□ -1.51
RNU4-42P-201ENST00000364738 FGFR3P22607 806 aa5.62□□□□□ -1.51
RNU4-42P-201ENST00000364738 SMTNP53814 917 aa5.62□□□□□ -1.51
RNU4-42P-201ENST00000364738 SUZ12Q15022 739 aaKnown RBP5.62□□□□□ -1.51
RNU4-42P-201ENST00000364738 WWC1Q8IX03 1113 aa5.62□□□□□ -1.51
RNU4-42P-201ENST00000364738 C1orf216Q8TAB5 229 aa5.62□□□□□ -1.51
RNU4-42P-201ENST00000364738 KLRG1Q96E93 195 aa5.62□□□□□ -1.51
RNU4-42P-201ENST00000364738 SERTAD1Q9UHV2 236 aa5.62□□□□□ -1.51
RNU4-42P-201ENST00000364738 SHISA8B8ZZ34 492 aa5.61□□□□□ -1.51
RNU4-42P-201ENST00000364738 BNIP3LO60238 219 aa5.61□□□□□ -1.51
RNU4-42P-201ENST00000364738 NBPF1Q3BBV0 1214 aa5.61□□□□□ -1.51
RNU4-42P-201ENST00000364738 FIGNL1Q6PIW4 674 aa5.61□□□□□ -1.51
RNU4-42P-201ENST00000364738 GOLGA6L1Q8N7Z2 621 aa5.61□□□□□ -1.51
RNU4-42P-201ENST00000364738 GALNT6Q8NCL4 622 aa5.61□□□□□ -1.51
RNU4-42P-201ENST00000364738 AIDAQ96BJ3 306 aa5.61□□□□□ -1.51
RNU4-42P-201ENST00000364738 DCAF5Q96JK2 942 aa5.61□□□□□ -1.51
RNU4-42P-201ENST00000364738 NDFIP2Q9NV92 336 aa5.61□□□□□ -1.51
RNU4-42P-201ENST00000364738 TMEM229AB2RXF0 380 aa5.6□□□□□ -1.51
RNU4-42P-201ENST00000364738 SKIP12755 728 aa5.6□□□□□ -1.51
RNU4-42P-201ENST00000364738 SNRPNP63162 240 aaKnown RBP5.6□□□□□ -1.51
RNU4-42P-201ENST00000364738 PSME1Q06323 249 aa5.6□□□□□ -1.51
RNU4-42P-201ENST00000364738 EML3Q32P44 896 aa5.6□□□□□ -1.51
RNU4-42P-201ENST00000364738 ARSJQ5FYB0 599 aaPredicted RBP5.6□□□□□ -1.51
RNU4-42P-201ENST00000364738 SLCO4C1Q6ZQN7 724 aa5.6□□□□□ -1.51
RNU4-42P-201ENST00000364738 RRAGCQ9HB90 399 aa5.6□□□□□ -1.51
RNU4-42P-201ENST00000364738 PCDHGC4Q9Y5F7 938 aa5.6□□□□□ -1.51
RNU4-42P-201ENST00000364738 A6NJY4 79 aa5.59□□□□□ -1.51
RNU4-42P-201ENST00000364738 TATP17735 454 aaPredicted RBP5.59□□□□□ -1.51
RNU4-42P-201ENST00000364738 AMPD1P23109 780 aa5.59□□□□□ -1.51
RNU4-42P-201ENST00000364738 CTBSQ01459 385 aa5.59□□□□□ -1.51
RNU4-42P-201ENST00000364738 PLA2G4EQ3MJ16 856 aa5.59□□□□□ -1.51
RNU4-42P-201ENST00000364738 C1orf229Q6ZS94 237 aaPredicted RBP5.59□□□□□ -1.51
RNU4-42P-201ENST00000364738 NLRP8Q86W28 1048 aa5.59□□□□□ -1.51
RNU4-42P-201ENST00000364738 EDARADDQ8WWZ3 215 aa5.59□□□□□ -1.51
RNU4-42P-201ENST00000364738 POM121Q96HA1 1249 aa5.59□□□□□ -1.51
RNU4-42P-201ENST00000364738 SLC4A9Q96Q91 983 aa5.59□□□□□ -1.51
RNU4-42P-201ENST00000364738 ZCCHC2Q9C0B9 1178 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms