RNA–Protein interactions for RNA: ENST00000361762.3

PCDH7-201, Transcript of protocadherin 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDH7, Length 6,403 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7-201ENST00000361762 TMOD3Q9NYL9 352 aa20.4■□□□□ 0.86
PCDH7-201ENST00000361762 DAPK1P53355 1430 aa20.4■□□□□ 0.86
PCDH7-201ENST00000361762 MINDY4BA8MYZ0 360 aa20.4■□□□□ 0.86
PCDH7-201ENST00000361762 CASTP20810 708 aaKnown RBP20.4■□□□□ 0.86
PCDH7-201ENST00000361762 TMPOP42166 694 aaKnown RBP20.39■□□□□ 0.86
PCDH7-201ENST00000361762 NME9Q86XW9 330 aa20.39■□□□□ 0.85
PCDH7-201ENST00000361762 AIDAQ96BJ3 306 aa20.39■□□□□ 0.85
PCDH7-201ENST00000361762 ANKRD1Q15327 319 aa20.39■□□□□ 0.85
PCDH7-201ENST00000361762 TRMT1Q9NXH9 659 aaKnown RBP20.39■□□□□ 0.85
PCDH7-201ENST00000361762 STARD3NLO95772 234 aa20.39■□□□□ 0.85
PCDH7-201ENST00000361762 ENOX2Q16206 610 aaKnown RBP20.38■□□□□ 0.85
PCDH7-201ENST00000361762 SLC4A8Q2Y0W8 1093 aa20.38■□□□□ 0.85
PCDH7-201ENST00000361762 DYDC1Q8WWB3 177 aa20.38■□□□□ 0.85
PCDH7-201ENST00000361762 LRRFIP2Q9Y608 721 aaKnown RBP20.38■□□□□ 0.85
PCDH7-201ENST00000361762 CEBPAP49715 358 aaPredicted RBP20.38■□□□□ 0.85
PCDH7-201ENST00000361762 NFE2L2Q16236 605 aa20.38■□□□□ 0.85
PCDH7-201ENST00000361762 UPF3BQ9BZI7 483 aaKnown RBP20.38■□□□□ 0.85
PCDH7-201ENST00000361762 ANKIB1Q9P2G1 1089 aa20.38■□□□□ 0.85
PCDH7-201ENST00000361762 MYO6Q9UM54 1294 aa20.38■□□□□ 0.85
PCDH7-201ENST00000361762 GOLGA6L7A0A1B0GV03 622 aa20.38■□□□□ 0.85
PCDH7-201ENST00000361762 RBM27Q9P2N5 1060 aaKnown RBP20.38■□□□□ 0.85
PCDH7-201ENST00000361762 FERMT3Q86UX7 667 aa20.38■□□□□ 0.85
PCDH7-201ENST00000361762 PANK2Q9BZ23 570 aa20.38■□□□□ 0.85
PCDH7-201ENST00000361762 BOLA2Q9H3K6 86 aa20.37■□□□□ 0.85
PCDH7-201ENST00000361762 F6X3S4 739 aa20.37■□□□□ 0.85
PCDH7-201ENST00000361762 ZPR1O75312 459 aa20.37■□□□□ 0.85
PCDH7-201ENST00000361762 MAP3K11Q16584 847 aa20.37■□□□□ 0.85
PCDH7-201ENST00000361762 NEFHP12036 1026 aa20.37■□□□□ 0.85
PCDH7-201ENST00000361762 JMYQ8N9B5 988 aa20.36■□□□□ 0.85
PCDH7-201ENST00000361762 ZNHIT6Q9NWK9 470 aaKnown RBP20.36■□□□□ 0.85
PCDH7-201ENST00000361762 ARHGEF11O15085 1522 aa20.36■□□□□ 0.85
PCDH7-201ENST00000361762 SUPT6HQ7KZ85 1726 aaKnown RBP20.36■□□□□ 0.85
PCDH7-201ENST00000361762 CCDC82Q8N4S0 544 aa20.36■□□□□ 0.85
PCDH7-201ENST00000361762 NOL7Q9UMY1 257 aaKnown RBP20.36■□□□□ 0.85
PCDH7-201ENST00000361762 ANKRD62A6NC57 917 aa20.35■□□□□ 0.85
PCDH7-201ENST00000361762 DHX8Q14562 1220 aaKnown RBP20.35■□□□□ 0.85
PCDH7-201ENST00000361762 CEP57L1Q8IYX8 460 aa20.35■□□□□ 0.85
PCDH7-201ENST00000361762 CC2D2AQ9P2K1 1620 aa20.35■□□□□ 0.85
PCDH7-201ENST00000361762 NCAPD3P42695 1498 aa20.35■□□□□ 0.85
PCDH7-201ENST00000361762 LARP6Q9BRS8 491 aaKnown RBP20.35■□□□□ 0.85
PCDH7-201ENST00000361762 FOXO3O43524 673 aa20.35■□□□□ 0.85
PCDH7-201ENST00000361762 TROQ12816 1431 aaPredicted RBP20.35■□□□□ 0.85
PCDH7-201ENST00000361762 IFT140Q96RY7 1462 aa20.35■□□□□ 0.85
PCDH7-201ENST00000361762 POLR3DP05423 398 aaPredicted RBP20.34■□□□□ 0.85
PCDH7-201ENST00000361762 STIM1Q13586 685 aa20.34■□□□□ 0.85
PCDH7-201ENST00000361762 GDPD2Q9HCC8 539 aa20.34■□□□□ 0.85
PCDH7-201ENST00000361762 URI1O94763 535 aaPredicted RBP20.34■□□□□ 0.85
PCDH7-201ENST00000361762 FCHSD2O94868 740 aa20.34■□□□□ 0.85
PCDH7-201ENST00000361762 PLEKHH2Q8IVE3 1493 aa20.34■□□□□ 0.85
PCDH7-201ENST00000361762 ZNF830Q96NB3 372 aaPredicted RBP20.34■□□□□ 0.85
PCDH7-201ENST00000361762 FBXO31Q5XUX0 539 aaPredicted RBP20.34■□□□□ 0.85
PCDH7-201ENST00000361762 CBFA2T2O43439 604 aa20.33■□□□□ 0.85
PCDH7-201ENST00000361762 MYCNP04198 464 aaPredicted RBP20.33■□□□□ 0.85
PCDH7-201ENST00000361762 CCDC8Q9H0W5 538 aaPredicted RBP20.33■□□□□ 0.85
PCDH7-201ENST00000361762 GPTP24298 496 aa20.33■□□□□ 0.85
PCDH7-201ENST00000361762 PLCD3Q8N3E9 789 aa20.33■□□□□ 0.85
PCDH7-201ENST00000361762 EMILIN1Q9Y6C2 1016 aa20.33■□□□□ 0.85
PCDH7-201ENST00000361762 ATAD2Q6PL18 1390 aa20.33■□□□□ 0.84
PCDH7-201ENST00000361762 GUCY1B3Q02153 619 aa20.33■□□□□ 0.84
PCDH7-201ENST00000361762 IMMTQ16891 758 aaKnown RBP20.33■□□□□ 0.84
PCDH7-201ENST00000361762 ANKRD30BQ9BXX2 1392 aa20.32■□□□□ 0.84
PCDH7-201ENST00000361762 CCDC83Q8IWF9 413 aa20.32■□□□□ 0.84
PCDH7-201ENST00000361762 PRPF40BQ6NWY9 871 aaKnown RBP20.32■□□□□ 0.84
PCDH7-201ENST00000361762 CFAP100Q494V2 611 aa20.32■□□□□ 0.84
PCDH7-201ENST00000361762 CCDC61Q9Y6R9 512 aa20.32■□□□□ 0.84
PCDH7-201ENST00000361762 CRACR2BQ8N4Y2 399 aaPredicted RBP20.32■□□□□ 0.84
PCDH7-201ENST00000361762 SHTN1A0MZ66 631 aa20.31■□□□□ 0.84
PCDH7-201ENST00000361762 CLIP2Q9UDT6 1046 aa20.31■□□□□ 0.84
PCDH7-201ENST00000361762 POGZQ7Z3K3 1410 aa20.31■□□□□ 0.84
PCDH7-201ENST00000361762 JARID2Q92833 1246 aaPredicted RBP20.31■□□□□ 0.84
PCDH7-201ENST00000361762 TOPBP1Q92547 1522 aa20.31■□□□□ 0.84
PCDH7-201ENST00000361762 CCDC183Q5T5S1 534 aa20.31■□□□□ 0.84
PCDH7-201ENST00000361762 KIF18AQ8NI77 898 aa20.31■□□□□ 0.84
PCDH7-201ENST00000361762 XRCC6P12956 609 aaKnown RBP eCLIP20.31■□□□□ 0.84
PCDH7-201ENST00000361762 DYNC1I1O14576 645 aa20.31■□□□□ 0.84
PCDH7-201ENST00000361762 ERLIN2O94905 339 aa20.31■□□□□ 0.84
PCDH7-201ENST00000361762 IGSF3O75054 1194 aa20.3■□□□□ 0.84
PCDH7-201ENST00000361762 CKAP2LQ8IYA6 745 aa20.3■□□□□ 0.84
PCDH7-201ENST00000361762 TIGD1Q96MW7 591 aa20.3■□□□□ 0.84
PCDH7-201ENST00000361762 ADCY5O95622 1261 aa20.3■□□□□ 0.84
PCDH7-201ENST00000361762 SLFN5Q08AF3 891 aa20.3■□□□□ 0.84
PCDH7-201ENST00000361762 TRMT1LQ7Z2T5 733 aaKnown RBP20.3■□□□□ 0.84
PCDH7-201ENST00000361762 CTNNA3Q9UI47 895 aa20.3■□□□□ 0.84
PCDH7-201ENST00000361762 MKNK2Q9HBH9 465 aa20.3■□□□□ 0.84
PCDH7-201ENST00000361762 TAF7Q15545 349 aaPredicted RBP20.29■□□□□ 0.84
PCDH7-201ENST00000361762 KCNH5Q8NCM2 988 aa20.29■□□□□ 0.84
PCDH7-201ENST00000361762 CDKL5O76039 1030 aa20.29■□□□□ 0.84
PCDH7-201ENST00000361762 ZRSR2Q15696 482 aaKnown RBP20.29■□□□□ 0.84
PCDH7-201ENST00000361762 CAVIN4Q5BKX8 364 aa20.29■□□□□ 0.84
PCDH7-201ENST00000361762 RNF187Q5TA31 235 aaPredicted RBP20.29■□□□□ 0.84
PCDH7-201ENST00000361762 SSR1P43307 286 aaKnown RBP20.29■□□□□ 0.84
PCDH7-201ENST00000361762 GTF2A1P52655 376 aaPredicted RBP20.29■□□□□ 0.84
PCDH7-201ENST00000361762 DACH1Q9UI36 760 aa20.29■□□□□ 0.84
PCDH7-201ENST00000361762 CLCN1P35523 988 aa20.28■□□□□ 0.84
PCDH7-201ENST00000361762 PIP4K2AP48426 406 aaPredicted RBP20.28■□□□□ 0.84
PCDH7-201ENST00000361762 CRACR2AQ9BSW2 395 aa20.28■□□□□ 0.84
PCDH7-201ENST00000361762 TRMT112Q9UI30 125 aaKnown RBP20.28■□□□□ 0.84
PCDH7-201ENST00000361762 IFIT1P09914 478 aaKnown RBP20.28■□□□□ 0.84
PCDH7-201ENST00000361762 CASQ1P31415 396 aa20.28■□□□□ 0.84
PCDH7-201ENST00000361762 LMAN1P49257 510 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms