RNA–Protein interactions for RNA: ENST00000361580.6

KIFAP3-201, Transcript of kinesin associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KIFAP3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFAP3-201ENST00000361580 PLEKHO1Q53GL0 409 aaPredicted RBP13.72□□□□□ -0.21
KIFAP3-201ENST00000361580 LRRC37A3O60309 1634 aa13.72□□□□□ -0.21
KIFAP3-201ENST00000361580 CCDC30Q5VVM6 783 aa13.71□□□□□ -0.21
KIFAP3-201ENST00000361580 CADPS2Q86UW7 1296 aa13.71□□□□□ -0.21
KIFAP3-201ENST00000361580 PTPRCP08575 1304 aa13.71□□□□□ -0.21
KIFAP3-201ENST00000361580 AKAP4Q5JQC9 854 aa13.71□□□□□ -0.21
KIFAP3-201ENST00000361580 C1orf141Q5JVX7 400 aa13.71□□□□□ -0.21
KIFAP3-201ENST00000361580 EXOC6BQ9Y2D4 811 aa13.71□□□□□ -0.21
KIFAP3-201ENST00000361580 VIRMAQ69YN4 1812 aaKnown RBP13.71□□□□□ -0.22
KIFAP3-201ENST00000361580 PNMA6EA0A0J9YXQ4 647 aa13.71□□□□□ -0.22
KIFAP3-201ENST00000361580 XIRP1Q702N8 1843 aaKnown RBP13.7□□□□□ -0.22
KIFAP3-201ENST00000361580 LMTK3Q96Q04 1460 aa13.7□□□□□ -0.22
KIFAP3-201ENST00000361580 ANKRD44Q8N8A2 993 aa13.7□□□□□ -0.22
KIFAP3-201ENST00000361580 ALS2Q96Q42 1657 aa13.7□□□□□ -0.22
KIFAP3-201ENST00000361580 STRCQ7RTU9 1775 aa13.69□□□□□ -0.22
KIFAP3-201ENST00000361580 GSPT1P15170 499 aaKnown RBP13.69□□□□□ -0.22
KIFAP3-201ENST00000361580 DCTPP1Q9H773 170 aa13.69□□□□□ -0.22
KIFAP3-201ENST00000361580 NFATC2IPQ8NCF5 419 aa13.69□□□□□ -0.22
KIFAP3-201ENST00000361580 GCC1Q96CN9 775 aa13.68□□□□□ -0.22
KIFAP3-201ENST00000361580 LRRFIP2Q9Y608 721 aaKnown RBP13.68□□□□□ -0.22
KIFAP3-201ENST00000361580 SPATA31A3Q5VYP0 1347 aa13.68□□□□□ -0.22
KIFAP3-201ENST00000361580 NPHP3Q7Z494 1330 aa13.68□□□□□ -0.22
KIFAP3-201ENST00000361580 MEGF6O75095 1541 aa13.68□□□□□ -0.22
KIFAP3-201ENST00000361580 TBC1D32Q96NH3 1257 aa13.68□□□□□ -0.22
KIFAP3-201ENST00000361580 SLAIN2Q9P270 581 aa13.68□□□□□ -0.22
KIFAP3-201ENST00000361580 PI4KAP2A4QPH2 592 aa13.68□□□□□ -0.22
KIFAP3-201ENST00000361580 PLEKHM2Q8IWE5 1019 aa13.68□□□□□ -0.22
KIFAP3-201ENST00000361580 PI4KAP1Q8N8J0 262 aa13.68□□□□□ -0.22
KIFAP3-201ENST00000361580 USP35Q9P2H5 1018 aa13.68□□□□□ -0.22
KIFAP3-201ENST00000361580 AIMP1Q12904 312 aaKnown RBP13.67□□□□□ -0.22
KIFAP3-201ENST00000361580 RAPGEF4Q8WZA2 1011 aa13.67□□□□□ -0.22
KIFAP3-201ENST00000361580 USP44Q9H0E7 712 aa13.67□□□□□ -0.22
KIFAP3-201ENST00000361580 NBPF7P0C2Y1 421 aaPredicted RBP13.67□□□□□ -0.22
KIFAP3-201ENST00000361580 SLKQ9H2G2 1235 aaPredicted RBP13.67□□□□□ -0.22
KIFAP3-201ENST00000361580 FAM208AQ9UK61 1670 aaKnown RBP13.67□□□□□ -0.22
KIFAP3-201ENST00000361580 CYP27B1O15528 508 aa13.66□□□□□ -0.22
KIFAP3-201ENST00000361580 DDRGK1Q96HY6 314 aa13.66□□□□□ -0.22
KIFAP3-201ENST00000361580 HAP1P54257 671 aaPredicted RBP13.65□□□□□ -0.22
KIFAP3-201ENST00000361580 AMOTQ4VCS5 1084 aa13.65□□□□□ -0.22
KIFAP3-201ENST00000361580 STRN4Q9NRL3 753 aa13.65□□□□□ -0.22
KIFAP3-201ENST00000361580 DAXXQ9UER7 740 aaPredicted RBP13.65□□□□□ -0.22
KIFAP3-201ENST00000361580 TNS3Q68CZ2 1445 aa13.65□□□□□ -0.22
KIFAP3-201ENST00000361580 GIGYF1O75420 1035 aaPredicted RBP13.65□□□□□ -0.22
KIFAP3-201ENST00000361580 C22orf23Q9BZE7 217 aa13.65□□□□□ -0.22
KIFAP3-201ENST00000361580 KIF1AQ12756 1690 aa13.65□□□□□ -0.22
KIFAP3-201ENST00000361580 CCT4P50991 539 aaKnown RBP13.65□□□□□ -0.22
KIFAP3-201ENST00000361580 TBC1D9Q6ZT07 1266 aa13.65□□□□□ -0.22
KIFAP3-201ENST00000361580 KDM6AO15550 1401 aaPredicted RBP13.64□□□□□ -0.23
KIFAP3-201ENST00000361580 PHRF1Q9P1Y6 1649 aaKnown RBP13.64□□□□□ -0.23
KIFAP3-201ENST00000361580 MYL6BP14649 208 aa13.64□□□□□ -0.23
KIFAP3-201ENST00000361580 CWF19L2Q2TBE0 894 aaKnown RBP13.64□□□□□ -0.23
KIFAP3-201ENST00000361580 JARID2Q92833 1246 aaPredicted RBP13.64□□□□□ -0.23
KIFAP3-201ENST00000361580 PHKG2P15735 406 aa13.64□□□□□ -0.23
KIFAP3-201ENST00000361580 PRDM11Q9NQV5 511 aa13.64□□□□□ -0.23
KIFAP3-201ENST00000361580 GNAI2P04899 355 aa13.63□□□□□ -0.23
KIFAP3-201ENST00000361580 RPAP2Q8IXW5 612 aaPredicted RBP13.63□□□□□ -0.23
KIFAP3-201ENST00000361580 RBM42Q9BTD8 480 aaKnown RBP13.63□□□□□ -0.23
KIFAP3-201ENST00000361580 TBC1D2Q9BYX2 928 aa13.63□□□□□ -0.23
KIFAP3-201ENST00000361580 TATP17735 454 aaPredicted RBP13.63□□□□□ -0.23
KIFAP3-201ENST00000361580 CHMP4BQ9H444 224 aaKnown RBP13.63□□□□□ -0.23
KIFAP3-201ENST00000361580 IL1RAPL2Q9NP60 686 aa13.63□□□□□ -0.23
KIFAP3-201ENST00000361580 LMO7Q8WWI1 1683 aa13.63□□□□□ -0.23
KIFAP3-201ENST00000361580 NCAPD2Q15021 1401 aa13.62□□□□□ -0.23
KIFAP3-201ENST00000361580 ADCY9O60503 1353 aa13.62□□□□□ -0.23
KIFAP3-201ENST00000361580 COL18A1P39060 1754 aa13.62□□□□□ -0.23
KIFAP3-201ENST00000361580 BMP2KLQ5H9B9 411 aa13.62□□□□□ -0.23
KIFAP3-201ENST00000361580 ZNF496Q96IT1 587 aaPredicted RBP13.62□□□□□ -0.23
KIFAP3-201ENST00000361580 UPF2Q9HAU5 1272 aaKnown RBP13.62□□□□□ -0.23
KIFAP3-201ENST00000361580 MAP3K2Q9Y2U5 619 aa13.62□□□□□ -0.23
KIFAP3-201ENST00000361580 USP16Q9Y5T5 823 aa13.62□□□□□ -0.23
KIFAP3-201ENST00000361580 KDM3BQ7LBC6 1761 aa13.61□□□□□ -0.23
KIFAP3-201ENST00000361580 TOM1L2Q6ZVM7 507 aa13.61□□□□□ -0.23
KIFAP3-201ENST00000361580 BEND3Q5T5X7 828 aa13.61□□□□□ -0.23
KIFAP3-201ENST00000361580 LARP1Q6PKG0 1096 aaKnown RBP13.61□□□□□ -0.23
KIFAP3-201ENST00000361580 ZNF790Q6PG37 636 aa13.6□□□□□ -0.23
KIFAP3-201ENST00000361580 DDX54Q8TDD1 881 aaKnown RBP13.6□□□□□ -0.23
KIFAP3-201ENST00000361580 SLC52A2Q9HAB3 445 aa13.6□□□□□ -0.23
KIFAP3-201ENST00000361580 UBTFL1P0CB47 393 aaPredicted RBP13.6□□□□□ -0.23
KIFAP3-201ENST00000361580 PDIA6Q15084 440 aa13.6□□□□□ -0.23
KIFAP3-201ENST00000361580 DNAAF4Q8WXU2 420 aa13.6□□□□□ -0.23
KIFAP3-201ENST00000361580 DCCP43146 1447 aa13.6□□□□□ -0.23
KIFAP3-201ENST00000361580 CAMTA1Q9Y6Y1 1673 aa13.6□□□□□ -0.23
KIFAP3-201ENST00000361580 CD2BP2O95400 341 aaKnown RBP13.59□□□□□ -0.23
KIFAP3-201ENST00000361580 SDSP20132 328 aa13.59□□□□□ -0.23
KIFAP3-201ENST00000361580 TTC22Q5TAA0 569 aa13.59□□□□□ -0.23
KIFAP3-201ENST00000361580 PPP1R42Q7Z4L9 355 aa13.59□□□□□ -0.23
KIFAP3-201ENST00000361580 SRCIN1Q9C0H9 1055 aa13.59□□□□□ -0.23
KIFAP3-201ENST00000361580 BABAM1Q9NWV8 329 aa13.59□□□□□ -0.23
KIFAP3-201ENST00000361580 MAP4K4O95819 1239 aaPredicted RBP13.59□□□□□ -0.23
KIFAP3-201ENST00000361580 ATP8B2P98198 1209 aa13.59□□□□□ -0.23
KIFAP3-201ENST00000361580 NUTM1Q86Y26 1132 aa13.59□□□□□ -0.23
KIFAP3-201ENST00000361580 FRAT2O75474 233 aaPredicted RBP13.58□□□□□ -0.24
KIFAP3-201ENST00000361580 NFKBIBQ15653 356 aa13.58□□□□□ -0.24
KIFAP3-201ENST00000361580 KIF2CQ99661 725 aa13.58□□□□□ -0.24
KIFAP3-201ENST00000361580 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.58□□□□□ -0.24
KIFAP3-201ENST00000361580 SOS2Q07890 1332 aaPredicted RBP13.58□□□□□ -0.24
KIFAP3-201ENST00000361580 KAT6BQ8WYB5 2073 aa13.58□□□□□ -0.24
KIFAP3-201ENST00000361580 CRYBG1Q9Y4K1 1723 aa13.57□□□□□ -0.24
KIFAP3-201ENST00000361580 IFNL2Q8IZJ0 200 aa13.57□□□□□ -0.24
KIFAP3-201ENST00000361580 FOXD4L1Q9NU39 408 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms