RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 SIPA1L3O60292 1781 aaPredicted RBP26.88■■□□□ 1.89
MAP1LC3A-201ENST00000360668 IPO8O15397 1037 aaKnown RBP26.88■■□□□ 1.89
MAP1LC3A-201ENST00000360668 KRT24Q2M2I5 525 aa26.88■■□□□ 1.89
MAP1LC3A-201ENST00000360668 ZCRB1Q8TBF4 217 aaKnown RBP26.88■■□□□ 1.89
MAP1LC3A-201ENST00000360668 QTRT2Q9H974 415 aaKnown RBP26.88■■□□□ 1.89
MAP1LC3A-201ENST00000360668 CYP27B1O15528 508 aa26.87■■□□□ 1.89
MAP1LC3A-201ENST00000360668 RXRBP28702 533 aa26.87■■□□□ 1.89
MAP1LC3A-201ENST00000360668 USP21Q9UK80 565 aa26.87■■□□□ 1.89
MAP1LC3A-201ENST00000360668 KDM6AO15550 1401 aaPredicted RBP26.86■■□□□ 1.89
MAP1LC3A-201ENST00000360668 B4GALNT3Q6L9W6 998 aa26.86■■□□□ 1.89
MAP1LC3A-201ENST00000360668 NOB1Q9ULX3 412 aaKnown RBP26.86■■□□□ 1.89
MAP1LC3A-201ENST00000360668 NRAPQ86VF7 1730 aa26.86■■□□□ 1.89
MAP1LC3A-201ENST00000360668 PCDH11XQ9BZA7 1347 aa26.86■■□□□ 1.89
MAP1LC3A-201ENST00000360668 PCDH11YQ9BZA8 1340 aa26.86■■□□□ 1.89
MAP1LC3A-201ENST00000360668 NWD2Q9ULI1 1742 aa26.85■■□□□ 1.89
MAP1LC3A-201ENST00000360668 ATF7IPQ6VMQ6 1270 aa26.85■■□□□ 1.89
MAP1LC3A-201ENST00000360668 DCAF5Q96JK2 942 aa26.85■■□□□ 1.89
MAP1LC3A-201ENST00000360668 PANK1Q8TE04 598 aa26.84■■□□□ 1.89
MAP1LC3A-201ENST00000360668 CCDC136Q96JN2 1154 aa26.84■■□□□ 1.89
MAP1LC3A-201ENST00000360668 BTBD11A6QL63 1104 aa26.84■■□□□ 1.89
MAP1LC3A-201ENST00000360668 ARHGAP45Q92619 1136 aa26.84■■□□□ 1.89
MAP1LC3A-201ENST00000360668 MRC1P22897 1456 aa26.83■■□□□ 1.89
MAP1LC3A-201ENST00000360668 DZIP1LQ8IYY4 767 aaKnown RBP26.83■■□□□ 1.89
MAP1LC3A-201ENST00000360668 TRIM27P14373 513 aa26.82■■□□□ 1.88
MAP1LC3A-201ENST00000360668 SHANK3Q9BYB0 1731 aa26.82■■□□□ 1.88
MAP1LC3A-201ENST00000360668 SLIT2O94813 1529 aa26.82■■□□□ 1.88
MAP1LC3A-201ENST00000360668 DISP2A7MBM2 1401 aa26.81■■□□□ 1.88
MAP1LC3A-201ENST00000360668 RLBP1P12271 317 aa26.81■■□□□ 1.88
MAP1LC3A-201ENST00000360668 FTSJ3Q8IY81 847 aaKnown RBP26.81■■□□□ 1.88
MAP1LC3A-201ENST00000360668 SLC52A2Q9HAB3 445 aa26.81■■□□□ 1.88
MAP1LC3A-201ENST00000360668 BCL9LQ86UU0 1499 aa26.81■■□□□ 1.88
MAP1LC3A-201ENST00000360668 EIF4A1P60842 406 aaKnown RBP26.8■■□□□ 1.88
MAP1LC3A-201ENST00000360668 TNNQ9UQP3 1299 aa26.8■■□□□ 1.88
MAP1LC3A-201ENST00000360668 RBM6P78332 1123 aaKnown RBP26.8■■□□□ 1.88
MAP1LC3A-201ENST00000360668 USP35Q9P2H5 1018 aa26.8■■□□□ 1.88
MAP1LC3A-201ENST00000360668 TRPC5Q9UL62 973 aaPredicted RBP26.8■■□□□ 1.88
MAP1LC3A-201ENST00000360668 COG6Q9Y2V7 657 aa26.8■■□□□ 1.88
MAP1LC3A-201ENST00000360668 AAMPQ13685 434 aa26.79■■□□□ 1.88
MAP1LC3A-201ENST00000360668 NKX1-1Q15270 411 aaPredicted RBP26.79■■□□□ 1.88
MAP1LC3A-201ENST00000360668 WNK3Q9BYP7 1800 aa26.78■■□□□ 1.88
MAP1LC3A-201ENST00000360668 HOXB7P09629 217 aa26.78■■□□□ 1.88
MAP1LC3A-201ENST00000360668 CLUAP1Q96AJ1 413 aa26.78■■□□□ 1.88
MAP1LC3A-201ENST00000360668 TCERG1O14776 1098 aaKnown RBP26.77■■□□□ 1.88
MAP1LC3A-201ENST00000360668 MVPQ14764 893 aaKnown RBP26.76■■□□□ 1.87
MAP1LC3A-201ENST00000360668 CHMP4AQ9BY43 222 aa26.76■■□□□ 1.87
MAP1LC3A-201ENST00000360668 ATRNO75882 1429 aa26.76■■□□□ 1.87
MAP1LC3A-201ENST00000360668 CCDC30Q5VVM6 783 aa26.75■■□□□ 1.87
MAP1LC3A-201ENST00000360668 THRAP3Q9Y2W1 955 aaKnown RBP26.75■■□□□ 1.87
MAP1LC3A-201ENST00000360668 KCNQ3O43525 872 aa26.75■■□□□ 1.87
MAP1LC3A-201ENST00000360668 UNC5CLQ8IV45 518 aa26.75■■□□□ 1.87
MAP1LC3A-201ENST00000360668 API5Q9BZZ5 524 aaKnown RBP26.75■■□□□ 1.87
MAP1LC3A-201ENST00000360668 SPATA31A1Q5TZJ5 1347 aa26.74■■□□□ 1.87
MAP1LC3A-201ENST00000360668 CDCA7Q9BWT1 371 aaPredicted RBP26.74■■□□□ 1.87
MAP1LC3A-201ENST00000360668 CACNA1FO60840 1977 aa26.73■■□□□ 1.87
MAP1LC3A-201ENST00000360668 HEG1Q9ULI3 1381 aa26.73■■□□□ 1.87
MAP1LC3A-201ENST00000360668 NFATC2IPQ8NCF5 419 aa26.73■■□□□ 1.87
MAP1LC3A-201ENST00000360668 ERVV-2B6SEH9 535 aa26.72■■□□□ 1.87
MAP1LC3A-201ENST00000360668 STK31Q9BXU1 1019 aa26.72■■□□□ 1.87
MAP1LC3A-201ENST00000360668 PTPRCP08575 1304 aa26.72■■□□□ 1.87
MAP1LC3A-201ENST00000360668 SLC4A2P04920 1241 aa26.71■■□□□ 1.87
MAP1LC3A-201ENST00000360668 CABP4P57796 275 aa26.71■■□□□ 1.87
MAP1LC3A-201ENST00000360668 DDX54Q8TDD1 881 aaKnown RBP26.71■■□□□ 1.87
MAP1LC3A-201ENST00000360668 SPATA31A5Q5VU36 1347 aa26.71■■□□□ 1.87
MAP1LC3A-201ENST00000360668 SPATA31A7Q8IWB4 1347 aa26.71■■□□□ 1.87
MAP1LC3A-201ENST00000360668 ABCC4O15439 1325 aa26.7■■□□□ 1.87
MAP1LC3A-201ENST00000360668 ZNF790Q6PG37 636 aa26.7■■□□□ 1.86
MAP1LC3A-201ENST00000360668 TMEM57Q8N5G2 664 aa26.7■■□□□ 1.86
MAP1LC3A-201ENST00000360668 DDX19BQ9UMR2 479 aa26.7■■□□□ 1.86
MAP1LC3A-201ENST00000360668 HDGFL1Q5TGJ6 251 aa26.69■■□□□ 1.86
MAP1LC3A-201ENST00000360668 GJD4Q96KN9 370 aaPredicted RBP26.68■■□□□ 1.86
MAP1LC3A-201ENST00000360668 RGS12O14924 1447 aa26.68■■□□□ 1.86
MAP1LC3A-201ENST00000360668 ITPRIPQ8IWB1 547 aa26.67■■□□□ 1.86
MAP1LC3A-201ENST00000360668 TNS2Q63HR2 1409 aa26.67■■□□□ 1.86
MAP1LC3A-201ENST00000360668 EXOC5O00471 708 aa26.67■■□□□ 1.86
MAP1LC3A-201ENST00000360668 GIGYF1O75420 1035 aaPredicted RBP26.67■■□□□ 1.86
MAP1LC3A-201ENST00000360668 BARGINQ6ZT62 677 aa26.65■■□□□ 1.86
MAP1LC3A-201ENST00000360668 SLC39A6Q13433 755 aa26.64■■□□□ 1.86
MAP1LC3A-201ENST00000360668 TTC5Q8N0Z6 440 aa26.64■■□□□ 1.86
MAP1LC3A-201ENST00000360668 TOGARAM1Q9Y4F4 1720 aa26.64■■□□□ 1.85
MAP1LC3A-201ENST00000360668 VPS72Q15906 364 aa26.63■■□□□ 1.85
MAP1LC3A-201ENST00000360668 CHMP4BQ9H444 224 aaKnown RBP26.63■■□□□ 1.85
MAP1LC3A-201ENST00000360668 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.63■■□□□ 1.85
MAP1LC3A-201ENST00000360668 NECTIN2Q92692 538 aa26.63■■□□□ 1.85
MAP1LC3A-201ENST00000360668 EIF2S2P20042 333 aaKnown RBP26.62■■□□□ 1.85
MAP1LC3A-201ENST00000360668 G2E3Q7L622 706 aa26.62■■□□□ 1.85
MAP1LC3A-201ENST00000360668 CCDC9Q9Y3X0 531 aaKnown RBP26.62■■□□□ 1.85
MAP1LC3A-201ENST00000360668 PAPPAQ13219 1627 aa26.61■■□□□ 1.85
MAP1LC3A-201ENST00000360668 KDM2BQ8NHM5 1336 aa26.6■■□□□ 1.85
MAP1LC3A-201ENST00000360668 FLIIQ13045 1269 aa26.6■■□□□ 1.85
MAP1LC3A-201ENST00000360668 INTS3Q68E01 1043 aaKnown RBP26.6■■□□□ 1.85
MAP1LC3A-201ENST00000360668 FMNL2Q96PY5 1086 aa26.6■■□□□ 1.85
MAP1LC3A-201ENST00000360668 CENPQQ7L2Z9 268 aaPredicted RBP26.59■■□□□ 1.85
MAP1LC3A-201ENST00000360668 DDB1Q16531 1140 aa26.58■■□□□ 1.85
MAP1LC3A-201ENST00000360668 ZNF496Q96IT1 587 aaPredicted RBP26.58■■□□□ 1.85
MAP1LC3A-201ENST00000360668 UBR2Q8IWV8 1755 aa26.58■■□□□ 1.85
MAP1LC3A-201ENST00000360668 C5P01031 1676 aa26.58■■□□□ 1.85
MAP1LC3A-201ENST00000360668 ZBTB40Q9NUA8 1239 aa26.58■■□□□ 1.85
MAP1LC3A-201ENST00000360668 DBF4Q9UBU7 674 aaPredicted RBP26.58■■□□□ 1.85
MAP1LC3A-201ENST00000360668 SNRPA1P09661 255 aaKnown RBP26.57■■□□□ 1.84
MAP1LC3A-201ENST00000360668 TMOD3Q9NYL9 352 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms