RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 NBPF14Q5TI25 921 aa25.21■■□□□ 1.63
HLA-DRB1-201ENST00000360004 IL17REQ8NFR9 667 aa25.21■■□□□ 1.63
HLA-DRB1-201ENST00000360004 CCNL1Q9UK58 526 aaPredicted RBP25.21■■□□□ 1.63
HLA-DRB1-201ENST00000360004 ASAP1Q9ULH1 1129 aa25.21■■□□□ 1.63
HLA-DRB1-201ENST00000360004 DCTN1Q14203 1278 aa25.2■■□□□ 1.62
HLA-DRB1-201ENST00000360004 RBM42Q9BTD8 480 aaKnown RBP25.2■■□□□ 1.62
HLA-DRB1-201ENST00000360004 RGPD3A6NKT7 1758 aaPredicted RBP25.19■■□□□ 1.62
HLA-DRB1-201ENST00000360004 RGPD4Q7Z3J3 1758 aa25.19■■□□□ 1.62
HLA-DRB1-201ENST00000360004 SLC27A3Q5K4L6 730 aa25.19■■□□□ 1.62
HLA-DRB1-201ENST00000360004 TTC5Q8N0Z6 440 aa25.19■■□□□ 1.62
HLA-DRB1-201ENST00000360004 MIER1Q8N108 512 aa25.19■■□□□ 1.62
HLA-DRB1-201ENST00000360004 APAF1O14727 1248 aa25.18■■□□□ 1.62
HLA-DRB1-201ENST00000360004 ATG3Q9NT62 314 aa25.18■■□□□ 1.62
HLA-DRB1-201ENST00000360004 HMGB2P26583 209 aaKnown RBP25.17■■□□□ 1.62
HLA-DRB1-201ENST00000360004 MRC1P22897 1456 aa25.15■■□□□ 1.62
HLA-DRB1-201ENST00000360004 BTBD11A6QL63 1104 aa25.15■■□□□ 1.62
HLA-DRB1-201ENST00000360004 PTCD1O75127 700 aaKnown RBP25.15■■□□□ 1.62
HLA-DRB1-201ENST00000360004 STK32BQ9NY57 414 aa25.15■■□□□ 1.62
HLA-DRB1-201ENST00000360004 CEMIPQ8WUJ3 1361 aa25.15■■□□□ 1.62
HLA-DRB1-201ENST00000360004 LOC102724428A0A0B4J2F2 783 aa25.14■■□□□ 1.62
HLA-DRB1-201ENST00000360004 KCNQ4P56696 695 aa25.14■■□□□ 1.62
HLA-DRB1-201ENST00000360004 SIK1P57059 783 aa25.14■■□□□ 1.62
HLA-DRB1-201ENST00000360004 SLC39A6Q13433 755 aa25.14■■□□□ 1.62
HLA-DRB1-201ENST00000360004 PROM2Q8N271 834 aa25.14■■□□□ 1.62
HLA-DRB1-201ENST00000360004 VIRMAQ69YN4 1812 aaKnown RBP25.14■■□□□ 1.61
HLA-DRB1-201ENST00000360004 RREB1Q92766 1687 aa25.13■■□□□ 1.61
HLA-DRB1-201ENST00000360004 ADAMTS7Q9UKP4 1686 aa25.13■■□□□ 1.61
HLA-DRB1-201ENST00000360004 ATP6V1AP38606 617 aa25.13■■□□□ 1.61
HLA-DRB1-201ENST00000360004 THUMPD2Q9BTF0 503 aaKnown RBP25.13■■□□□ 1.61
HLA-DRB1-201ENST00000360004 DLG5Q8TDM6 1919 aa25.12■■□□□ 1.61
HLA-DRB1-201ENST00000360004 SENP3-EIF4A1A0A087X0R7 540 aa25.11■■□□□ 1.61
HLA-DRB1-201ENST00000360004 TAF7Q15545 349 aaPredicted RBP25.11■■□□□ 1.61
HLA-DRB1-201ENST00000360004 NUP188Q5SRE5 1749 aa25.1■■□□□ 1.61
HLA-DRB1-201ENST00000360004 LRRC4BQ9NT99 713 aa25.1■■□□□ 1.61
HLA-DRB1-201ENST00000360004 LY75O60449 1722 aa25.09■■□□□ 1.61
HLA-DRB1-201ENST00000360004 ZNF790Q6PG37 636 aa25.08■■□□□ 1.61
HLA-DRB1-201ENST00000360004 LAS1LQ9Y4W2 734 aaKnown RBP25.08■■□□□ 1.61
HLA-DRB1-201ENST00000360004 PSDA5PKW4 1024 aaPredicted RBP25.07■■□□□ 1.6
HLA-DRB1-201ENST00000360004 CALD1Q05682 793 aaKnown RBP25.07■■□□□ 1.6
HLA-DRB1-201ENST00000360004 R3HDM1Q15032 1099 aaKnown RBP25.07■■□□□ 1.6
HLA-DRB1-201ENST00000360004 SALL2Q9Y467 1007 aaPredicted RBP25.07■■□□□ 1.6
HLA-DRB1-201ENST00000360004 AK7Q96M32 723 aa25.06■■□□□ 1.6
HLA-DRB1-201ENST00000360004 FMNL2Q96PY5 1086 aa25.06■■□□□ 1.6
HLA-DRB1-201ENST00000360004 MIS18AQ9NYP9 233 aa25.05■■□□□ 1.6
HLA-DRB1-201ENST00000360004 TFCP2L1Q9NZI6 479 aa25.05■■□□□ 1.6
HLA-DRB1-201ENST00000360004 TSPYL4Q9UJ04 414 aa25.05■■□□□ 1.6
HLA-DRB1-201ENST00000360004 TRIM35Q9UPQ4 493 aa25.05■■□□□ 1.6
HLA-DRB1-201ENST00000360004 SLC15A2Q16348 729 aa25.04■■□□□ 1.6
HLA-DRB1-201ENST00000360004 ANO8Q9HCE9 1232 aaPredicted RBP25.04■■□□□ 1.6
HLA-DRB1-201ENST00000360004 PAPPAQ13219 1627 aa25.02■■□□□ 1.6
HLA-DRB1-201ENST00000360004 ITPK1Q13572 414 aa25.02■■□□□ 1.6
HLA-DRB1-201ENST00000360004 SIPA1L3O60292 1781 aaPredicted RBP25.02■■□□□ 1.6
HLA-DRB1-201ENST00000360004 ZNF827Q17R98 1081 aa25.01■■□□□ 1.59
HLA-DRB1-201ENST00000360004 LINC00116Q8NCU8 138 aa25.01■■□□□ 1.59
HLA-DRB1-201ENST00000360004 ZNF496Q96IT1 587 aaPredicted RBP25.01■■□□□ 1.59
HLA-DRB1-201ENST00000360004 C5P01031 1676 aa25.01■■□□□ 1.59
HLA-DRB1-201ENST00000360004 MSH5O43196 834 aa25■■□□□ 1.59
HLA-DRB1-201ENST00000360004 KCNQ3O43525 872 aa25■■□□□ 1.59
HLA-DRB1-201ENST00000360004 KCPQ6ZWJ8 1503 aa24.99■■□□□ 1.59
HLA-DRB1-201ENST00000360004 DNAJC10Q8IXB1 793 aa24.99■■□□□ 1.59
HLA-DRB1-201ENST00000360004 VSIG10Q8N0Z9 540 aa24.99■■□□□ 1.59
HLA-DRB1-201ENST00000360004 SLC4A9Q96Q91 983 aa24.99■■□□□ 1.59
HLA-DRB1-201ENST00000360004 HEG1Q9ULI3 1381 aa24.98■■□□□ 1.59
HLA-DRB1-201ENST00000360004 AKT1S1Q96B36 256 aa24.98■■□□□ 1.59
HLA-DRB1-201ENST00000360004 TEX13AQ9BXU3 409 aaPredicted RBP24.98■■□□□ 1.59
HLA-DRB1-201ENST00000360004 GNPATO15228 680 aa24.97■■□□□ 1.59
HLA-DRB1-201ENST00000360004 STARD3NLO95772 234 aa24.97■■□□□ 1.59
HLA-DRB1-201ENST00000360004 CCDC27Q2M243 656 aa24.97■■□□□ 1.59
HLA-DRB1-201ENST00000360004 BABAM1Q9NWV8 329 aa24.97■■□□□ 1.59
HLA-DRB1-201ENST00000360004 PHF14O94880 888 aa24.96■■□□□ 1.59
HLA-DRB1-201ENST00000360004 GNAI1P63096 354 aa24.96■■□□□ 1.59
HLA-DRB1-201ENST00000360004 NGEFQ8N5V2 710 aa24.96■■□□□ 1.59
HLA-DRB1-201ENST00000360004 C4BP0C0L5 1744 aa24.95■■□□□ 1.59
HLA-DRB1-201ENST00000360004 SNRPA1P09661 255 aaKnown RBP24.95■■□□□ 1.58
HLA-DRB1-201ENST00000360004 WWC1Q8IX03 1113 aa24.95■■□□□ 1.58
HLA-DRB1-201ENST00000360004 CRKLP46109 303 aaKnown RBP24.94■■□□□ 1.58
HLA-DRB1-201ENST00000360004 NCBP3Q53F19 620 aaKnown RBP24.94■■□□□ 1.58
HLA-DRB1-201ENST00000360004 CFAP44Q96MT7 982 aa24.94■■□□□ 1.58
HLA-DRB1-201ENST00000360004 RTCBQ9Y3I0 505 aaKnown RBP24.94■■□□□ 1.58
HLA-DRB1-201ENST00000360004 UBR2Q8IWV8 1755 aa24.94■■□□□ 1.58
HLA-DRB1-201ENST00000360004 ZNF831Q5JPB2 1677 aa24.94■■□□□ 1.58
HLA-DRB1-201ENST00000360004 TAF1LQ8IZX4 1826 aa24.93■■□□□ 1.58
HLA-DRB1-201ENST00000360004 CNTNAP4Q9C0A0 1308 aa24.93■■□□□ 1.58
HLA-DRB1-201ENST00000360004 NPM2Q86SE8 214 aaKnown RBP24.93■■□□□ 1.58
HLA-DRB1-201ENST00000360004 FLAD1Q8NFF5 587 aa24.93■■□□□ 1.58
HLA-DRB1-201ENST00000360004 CCDC87Q9NVE4 849 aa24.93■■□□□ 1.58
HLA-DRB1-201ENST00000360004 IFT57Q9NWB7 429 aa24.93■■□□□ 1.58
HLA-DRB1-201ENST00000360004 CHL1O00533 1208 aa24.92■■□□□ 1.58
HLA-DRB1-201ENST00000360004 EIF4A1P60842 406 aaKnown RBP24.92■■□□□ 1.58
HLA-DRB1-201ENST00000360004 RC3H1Q5TC82 1133 aaKnown RBP24.92■■□□□ 1.58
HLA-DRB1-201ENST00000360004 TJP1Q07157 1748 aa24.91■■□□□ 1.58
HLA-DRB1-201ENST00000360004 KDM3BQ7LBC6 1761 aa24.9■■□□□ 1.58
HLA-DRB1-201ENST00000360004 CYP19A1P11511 503 aaPredicted RBP24.9■■□□□ 1.58
HLA-DRB1-201ENST00000360004 CANXP27824 592 aaKnown RBP24.89■■□□□ 1.58
HLA-DRB1-201ENST00000360004 MBIPQ9NS73 344 aa24.89■■□□□ 1.58
HLA-DRB1-201ENST00000360004 ZNF330Q9Y3S2 320 aaPredicted RBP24.89■■□□□ 1.58
HLA-DRB1-201ENST00000360004 PNPLA7Q6ZV29 1317 aa24.88■■□□□ 1.57
HLA-DRB1-201ENST00000360004 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.88■■□□□ 1.57
HLA-DRB1-201ENST00000360004 SSFA2P28290 1259 aa24.88■■□□□ 1.57
HLA-DRB1-201ENST00000360004 TRAPPC3LQ5T215 181 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms