RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 DISP2A7MBM2 1401 aa17.67■□□□□ 0.42
CSNK1E-201ENST00000359867 WNK3Q9BYP7 1800 aa17.67■□□□□ 0.42
CSNK1E-201ENST00000359867 ZNF853P0CG23 659 aa17.67■□□□□ 0.42
CSNK1E-201ENST00000359867 FAM98CQ17RN3 349 aaKnown RBP17.67■□□□□ 0.42
CSNK1E-201ENST00000359867 AKAP4Q5JQC9 854 aa17.67■□□□□ 0.42
CSNK1E-201ENST00000359867 IL17REQ8NFR9 667 aa17.67■□□□□ 0.42
CSNK1E-201ENST00000359867 ZCRB1Q8TBF4 217 aaKnown RBP17.67■□□□□ 0.42
CSNK1E-201ENST00000359867 ALDH1L2Q3SY69 923 aa17.66■□□□□ 0.42
CSNK1E-201ENST00000359867 DDX54Q8TDD1 881 aaKnown RBP17.66■□□□□ 0.42
CSNK1E-201ENST00000359867 LGR6Q9HBX8 967 aa17.66■□□□□ 0.42
CSNK1E-201ENST00000359867 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.66■□□□□ 0.42
CSNK1E-201ENST00000359867 SHANK3Q9BYB0 1731 aa17.66■□□□□ 0.42
CSNK1E-201ENST00000359867 ZKSCAN2Q63HK3 967 aa17.66■□□□□ 0.42
CSNK1E-201ENST00000359867 PANK1Q8TE04 598 aa17.66■□□□□ 0.42
CSNK1E-201ENST00000359867 PHKG2P15735 406 aa17.65■□□□□ 0.42
CSNK1E-201ENST00000359867 CFAP44Q96MT7 982 aa17.64■□□□□ 0.41
CSNK1E-201ENST00000359867 BCL2L13Q9BXK5 485 aa17.64■□□□□ 0.41
CSNK1E-201ENST00000359867 SMC4Q9NTJ3 1288 aa17.64■□□□□ 0.41
CSNK1E-201ENST00000359867 COG6Q9Y2V7 657 aa17.64■□□□□ 0.41
CSNK1E-201ENST00000359867 IFNL2Q8IZJ0 200 aa17.64■□□□□ 0.41
CSNK1E-201ENST00000359867 THRAP3Q9Y2W1 955 aaKnown RBP17.64■□□□□ 0.41
CSNK1E-201ENST00000359867 VIRMAQ69YN4 1812 aaKnown RBP17.64■□□□□ 0.41
CSNK1E-201ENST00000359867 PCDH11XQ9BZA7 1347 aa17.63■□□□□ 0.41
CSNK1E-201ENST00000359867 PCDH11YQ9BZA8 1340 aa17.63■□□□□ 0.41
CSNK1E-201ENST00000359867 BRPF1P55201 1214 aaPredicted RBP17.63■□□□□ 0.41
CSNK1E-201ENST00000359867 SSH1Q8WYL5 1049 aa17.63■□□□□ 0.41
CSNK1E-201ENST00000359867 CLUAP1Q96AJ1 413 aa17.63■□□□□ 0.41
CSNK1E-201ENST00000359867 BACH2Q9BYV9 841 aa17.63■□□□□ 0.41
CSNK1E-201ENST00000359867 GLI3P10071 1580 aa17.63■□□□□ 0.41
CSNK1E-201ENST00000359867 A0A0G2JS52 829 aa17.63■□□□□ 0.41
CSNK1E-201ENST00000359867 KDM6AO15550 1401 aaPredicted RBP17.62■□□□□ 0.41
CSNK1E-201ENST00000359867 GJD4Q96KN9 370 aaPredicted RBP17.62■□□□□ 0.41
CSNK1E-201ENST00000359867 MIS18AQ9NYP9 233 aa17.62■□□□□ 0.41
CSNK1E-201ENST00000359867 HTATSF1O43719 755 aaKnown RBP17.62■□□□□ 0.41
CSNK1E-201ENST00000359867 BARGINQ6ZT62 677 aa17.62■□□□□ 0.41
CSNK1E-201ENST00000359867 QTRT2Q9H974 415 aaKnown RBP17.62■□□□□ 0.41
CSNK1E-201ENST00000359867 TRPC5Q9UL62 973 aaPredicted RBP17.62■□□□□ 0.41
CSNK1E-201ENST00000359867 KIF16BQ96L93 1317 aa17.62■□□□□ 0.41
CSNK1E-201ENST00000359867 ATRNO75882 1429 aa17.61■□□□□ 0.41
CSNK1E-201ENST00000359867 DZIP1LQ8IYY4 767 aaKnown RBP17.61■□□□□ 0.41
CSNK1E-201ENST00000359867 LRRC37A3O60309 1634 aa17.61■□□□□ 0.41
CSNK1E-201ENST00000359867 PLEKHG2Q9H7P9 1386 aa17.61■□□□□ 0.41
CSNK1E-201ENST00000359867 EXOC5O00471 708 aa17.61■□□□□ 0.41
CSNK1E-201ENST00000359867 IPO8O15397 1037 aaKnown RBP17.61■□□□□ 0.41
CSNK1E-201ENST00000359867 RNMTO43148 476 aaKnown RBP17.61■□□□□ 0.41
CSNK1E-201ENST00000359867 CEMIPQ8WUJ3 1361 aa17.61■□□□□ 0.41
CSNK1E-201ENST00000359867 RLBP1P12271 317 aa17.6■□□□□ 0.41
CSNK1E-201ENST00000359867 DDB1Q16531 1140 aa17.6■□□□□ 0.41
CSNK1E-201ENST00000359867 MBIPQ9NS73 344 aa17.6■□□□□ 0.41
CSNK1E-201ENST00000359867 TNS2Q63HR2 1409 aa17.6■□□□□ 0.41
CSNK1E-201ENST00000359867 MVPQ14764 893 aaKnown RBP17.59■□□□□ 0.41
CSNK1E-201ENST00000359867 CDCA7Q9BWT1 371 aaPredicted RBP17.59■□□□□ 0.41
CSNK1E-201ENST00000359867 VAMP4O75379 141 aa17.59■□□□□ 0.41
CSNK1E-201ENST00000359867 ATF7IPQ6VMQ6 1270 aa17.59■□□□□ 0.41
CSNK1E-201ENST00000359867 SCN11AQ9UI33 1791 aa17.58■□□□□ 0.41
CSNK1E-201ENST00000359867 FTSJ3Q8IY81 847 aaKnown RBP17.58■□□□□ 0.41
CSNK1E-201ENST00000359867 TEFQ10587 303 aa17.58■□□□□ 0.4
CSNK1E-201ENST00000359867 DCAF5Q96JK2 942 aa17.57■□□□□ 0.4
CSNK1E-201ENST00000359867 NOB1Q9ULX3 412 aaKnown RBP17.57■□□□□ 0.4
CSNK1E-201ENST00000359867 TNNQ9UQP3 1299 aa17.57■□□□□ 0.4
CSNK1E-201ENST00000359867 ADAMTS7Q9UKP4 1686 aa17.57■□□□□ 0.4
CSNK1E-201ENST00000359867 TRIM27P14373 513 aa17.57■□□□□ 0.4
CSNK1E-201ENST00000359867 ILDR1Q86SU0 546 aaPredicted RBP17.56■□□□□ 0.4
CSNK1E-201ENST00000359867 TSPYL4Q9UJ04 414 aa17.56■□□□□ 0.4
CSNK1E-201ENST00000359867 KAT6BQ8WYB5 2073 aa17.56■□□□□ 0.4
CSNK1E-201ENST00000359867 CHL1O00533 1208 aa17.55■□□□□ 0.4
CSNK1E-201ENST00000359867 ARHGAP45Q92619 1136 aa17.55■□□□□ 0.4
CSNK1E-201ENST00000359867 HSP90AB1P08238 724 aaKnown RBP17.55■□□□□ 0.4
CSNK1E-201ENST00000359867 TAF7Q15545 349 aaPredicted RBP17.55■□□□□ 0.4
CSNK1E-201ENST00000359867 KRT24Q2M2I5 525 aa17.55■□□□□ 0.4
CSNK1E-201ENST00000359867 ZNF772Q68DY9 489 aaPredicted RBP17.55■□□□□ 0.4
CSNK1E-201ENST00000359867 MARCH10Q8NA82 808 aaPredicted RBP17.55■□□□□ 0.4
CSNK1E-201ENST00000359867 NFATC2IPQ8NCF5 419 aa17.55■□□□□ 0.4
CSNK1E-201ENST00000359867 THSD7AQ9UPZ6 1657 aa17.55■□□□□ 0.4
CSNK1E-201ENST00000359867 TOGARAM1Q9Y4F4 1720 aa17.54■□□□□ 0.4
CSNK1E-201ENST00000359867 TWISTNBQ3B726 338 aaPredicted RBP17.54■□□□□ 0.4
CSNK1E-201ENST00000359867 DDX19BQ9UMR2 479 aa17.54■□□□□ 0.4
CSNK1E-201ENST00000359867 ELL2O00472 640 aaPredicted RBP17.54■□□□□ 0.4
CSNK1E-201ENST00000359867 NKX1-1Q15270 411 aaPredicted RBP17.54■□□□□ 0.4
CSNK1E-201ENST00000359867 RGS17Q9UGC6 210 aaPredicted RBP17.54■□□□□ 0.4
CSNK1E-201ENST00000359867 IGHDP01880 384 aa17.53■□□□□ 0.4
CSNK1E-201ENST00000359867 FAM182BQ5T319 152 aa17.53■□□□□ 0.4
CSNK1E-201ENST00000359867 MRPL50Q8N5N7 158 aaKnown RBP17.53■□□□□ 0.4
CSNK1E-201ENST00000359867 SLC52A2Q9HAB3 445 aa17.53■□□□□ 0.4
CSNK1E-201ENST00000359867 TSPYL6Q8N831 410 aa17.53■□□□□ 0.4
CSNK1E-201ENST00000359867 SIPA1L3O60292 1781 aaPredicted RBP17.53■□□□□ 0.4
CSNK1E-201ENST00000359867 BTBD11A6QL63 1104 aa17.52■□□□□ 0.4
CSNK1E-201ENST00000359867 KCNQ3O43525 872 aa17.52■□□□□ 0.4
CSNK1E-201ENST00000359867 SEPT12Q8IYM1 358 aa17.52■□□□□ 0.4
CSNK1E-201ENST00000359867 SLC4A3P48751 1232 aa17.52■□□□□ 0.4
CSNK1E-201ENST00000359867 CABP4P57796 275 aa17.52■□□□□ 0.4
CSNK1E-201ENST00000359867 EP400Q96L91 3159 aa17.52■□□□□ 0.39
CSNK1E-201ENST00000359867 C8orf58Q8NAV2 365 aa17.51■□□□□ 0.39
CSNK1E-201ENST00000359867 SLC39A6Q13433 755 aa17.51■□□□□ 0.39
CSNK1E-201ENST00000359867 RWDD1Q9H446 243 aaPredicted RBP17.51■□□□□ 0.39
CSNK1E-201ENST00000359867 MRC1P22897 1456 aa17.5■□□□□ 0.39
CSNK1E-201ENST00000359867 ONECUT3O60422 494 aaPredicted RBP17.5■□□□□ 0.39
CSNK1E-201ENST00000359867 SYTL4Q96C24 671 aaPredicted RBP17.5■□□□□ 0.39
CSNK1E-201ENST00000359867 PCDHB15Q9Y5E8 787 aa17.5■□□□□ 0.39
CSNK1E-201ENST00000359867 ACSBG1Q96GR2 724 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms