RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 HFM1A2PYH4 1435 aa21.45■■□□□ 1.02
SHANK1-202ENST00000359082 SCLT1Q96NL6 688 aa21.45■■□□□ 1.02
SHANK1-202ENST00000359082 ANKRD30BQ9BXX2 1392 aa21.44■■□□□ 1.02
SHANK1-202ENST00000359082 CCDC178Q5BJE1 867 aa21.44■■□□□ 1.02
SHANK1-202ENST00000359082 GOPCQ9HD26 462 aa21.44■■□□□ 1.02
SHANK1-202ENST00000359082 PPP1R12BO60237 982 aaPredicted RBP21.44■■□□□ 1.02
SHANK1-202ENST00000359082 MCM4P33991 863 aa21.44■■□□□ 1.02
SHANK1-202ENST00000359082 DYDC1Q8WWB3 177 aa21.44■■□□□ 1.02
SHANK1-202ENST00000359082 TSG101Q99816 390 aa21.44■■□□□ 1.02
SHANK1-202ENST00000359082 TNIP1Q15025 636 aa21.44■■□□□ 1.02
SHANK1-202ENST00000359082 PRDM11Q9NQV5 511 aa21.44■■□□□ 1.02
SHANK1-202ENST00000359082 MAP2K1Q02750 393 aaPredicted RBP21.43■■□□□ 1.02
SHANK1-202ENST00000359082 TRIM21P19474 475 aaKnown RBP21.43■■□□□ 1.02
SHANK1-202ENST00000359082 CCDC91Q7Z6B0 441 aa21.43■■□□□ 1.02
SHANK1-202ENST00000359082 GUCY1B3Q02153 619 aa21.43■■□□□ 1.02
SHANK1-202ENST00000359082 CRACR2BQ8N4Y2 399 aaPredicted RBP21.42■■□□□ 1.02
SHANK1-202ENST00000359082 DNA2P51530 1060 aa21.42■■□□□ 1.02
SHANK1-202ENST00000359082 MYD88Q99836 296 aa21.42■■□□□ 1.02
SHANK1-202ENST00000359082 RRP9O43818 475 aaKnown RBP21.42■■□□□ 1.02
SHANK1-202ENST00000359082 UBXN4Q92575 508 aa21.42■■□□□ 1.02
SHANK1-202ENST00000359082 ANAPC15P60006 121 aa21.42■■□□□ 1.02
SHANK1-202ENST00000359082 MKNK2Q9HBH9 465 aa21.42■■□□□ 1.02
SHANK1-202ENST00000359082 TMOD2Q9NZR1 351 aa21.42■■□□□ 1.02
SHANK1-202ENST00000359082 FKBP15Q5T1M5 1219 aa21.42■■□□□ 1.02
SHANK1-202ENST00000359082 INCENPQ9NQS7 918 aa21.41■■□□□ 1.02
SHANK1-202ENST00000359082 C9orf84Q5VXU9 1444 aa21.41■■□□□ 1.02
SHANK1-202ENST00000359082 HMGXB3Q12766 1538 aa21.41■■□□□ 1.02
SHANK1-202ENST00000359082 ZC3H6P61129 1189 aaKnown RBP21.41■■□□□ 1.02
SHANK1-202ENST00000359082 MCM10Q7L590 875 aa21.41■■□□□ 1.02
SHANK1-202ENST00000359082 BOLA2Q9H3K6 86 aa21.41■■□□□ 1.02
SHANK1-202ENST00000359082 SLC26A8Q96RN1 970 aa21.41■■□□□ 1.02
SHANK1-202ENST00000359082 CACNA2D4Q7Z3S7 1137 aa21.4■■□□□ 1.02
SHANK1-202ENST00000359082 PDCL2Q8N4E4 241 aa21.4■■□□□ 1.02
SHANK1-202ENST00000359082 SNAPC4Q5SXM2 1469 aa21.4■■□□□ 1.02
SHANK1-202ENST00000359082 POGZQ7Z3K3 1410 aa21.4■■□□□ 1.02
SHANK1-202ENST00000359082 MX1P20591 662 aa21.4■■□□□ 1.02
SHANK1-202ENST00000359082 CRACR2AQ9BSW2 395 aa21.4■■□□□ 1.02
SHANK1-202ENST00000359082 RPAP2Q8IXW5 612 aaPredicted RBP21.4■■□□□ 1.02
SHANK1-202ENST00000359082 TOPBP1Q92547 1522 aa21.4■■□□□ 1.02
SHANK1-202ENST00000359082 STARD3NLO95772 234 aa21.4■■□□□ 1.02
SHANK1-202ENST00000359082 NFE2L2Q16236 605 aa21.4■■□□□ 1.02
SHANK1-202ENST00000359082 CAVIN4Q5BKX8 364 aa21.39■■□□□ 1.02
SHANK1-202ENST00000359082 AKAP2Q9Y2D5 859 aa21.39■■□□□ 1.02
SHANK1-202ENST00000359082 GOLGA6L10A0A0M3HER8 536 aa21.39■■□□□ 1.02
SHANK1-202ENST00000359082 U3KPZ7 1027 aaPredicted RBP21.39■■□□□ 1.02
SHANK1-202ENST00000359082 CIZ1Q9ULV3 898 aaPredicted RBP21.39■■□□□ 1.01
SHANK1-202ENST00000359082 KIAA1107Q9UPP5 1409 aa21.39■■□□□ 1.01
SHANK1-202ENST00000359082 NESP48681 1621 aa21.39■■□□□ 1.01
SHANK1-202ENST00000359082 TMCO3Q6UWJ1 677 aa21.39■■□□□ 1.01
SHANK1-202ENST00000359082 NBPF8Q3BBV2 869 aa21.39■■□□□ 1.01
SHANK1-202ENST00000359082 PPP4R3AQ6IN85 833 aa21.39■■□□□ 1.01
SHANK1-202ENST00000359082 CTNNBL1Q8WYA6 563 aaPredicted RBP21.39■■□□□ 1.01
SHANK1-202ENST00000359082 CETN2P41208 172 aa21.38■■□□□ 1.01
SHANK1-202ENST00000359082 ANKIB1Q9P2G1 1089 aa21.38■■□□□ 1.01
SHANK1-202ENST00000359082 NSD3Q9BZ95 1437 aa21.38■■□□□ 1.01
SHANK1-202ENST00000359082 MAPK8IP2Q13387 824 aaPredicted RBP21.38■■□□□ 1.01
SHANK1-202ENST00000359082 DUSP27Q5VZP5 1158 aa21.38■■□□□ 1.01
SHANK1-202ENST00000359082 BCCIPQ9P287 314 aaKnown RBP eCLIP21.38■■□□□ 1.01
SHANK1-202ENST00000359082 PTPN14Q15678 1187 aa21.38■■□□□ 1.01
SHANK1-202ENST00000359082 CCDC82Q8N4S0 544 aa21.38■■□□□ 1.01
SHANK1-202ENST00000359082 KIF5CO60282 957 aa21.38■■□□□ 1.01
SHANK1-202ENST00000359082 KIF1BPQ96EK5 621 aa21.38■■□□□ 1.01
SHANK1-202ENST00000359082 THUMPD2Q9BTF0 503 aaKnown RBP21.38■■□□□ 1.01
SHANK1-202ENST00000359082 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.38■■□□□ 1.01
SHANK1-202ENST00000359082 IFIT1P09914 478 aaKnown RBP21.37■■□□□ 1.01
SHANK1-202ENST00000359082 CCDC96Q2M329 555 aa21.37■■□□□ 1.01
SHANK1-202ENST00000359082 ZNF287Q9HBT7 754 aa21.37■■□□□ 1.01
SHANK1-202ENST00000359082 TNNT1P13805 278 aa21.37■■□□□ 1.01
SHANK1-202ENST00000359082 PODXL2Q9NZ53 605 aa21.37■■□□□ 1.01
SHANK1-202ENST00000359082 SHTN1A0MZ66 631 aa21.37■■□□□ 1.01
SHANK1-202ENST00000359082 FCHSD2O94868 740 aa21.37■■□□□ 1.01
SHANK1-202ENST00000359082 LIG1P18858 919 aa21.37■■□□□ 1.01
SHANK1-202ENST00000359082 ZSCAN12O43309 604 aa21.37■■□□□ 1.01
SHANK1-202ENST00000359082 SFPQP23246 707 aaKnown RBP eCLIP21.37■■□□□ 1.01
SHANK1-202ENST00000359082 PPM1FP49593 454 aaPredicted RBP21.36■■□□□ 1.01
SHANK1-202ENST00000359082 SLC52A1Q9NWF4 448 aa21.36■■□□□ 1.01
SHANK1-202ENST00000359082 RAB11FIP3O75154 756 aa21.36■■□□□ 1.01
SHANK1-202ENST00000359082 TMPOP42166 694 aaKnown RBP21.36■■□□□ 1.01
SHANK1-202ENST00000359082 NAPBQ9H115 298 aa21.36■■□□□ 1.01
SHANK1-202ENST00000359082 ESPNB1AK53 854 aa21.36■■□□□ 1.01
SHANK1-202ENST00000359082 USP8P40818 1118 aa21.36■■□□□ 1.01
SHANK1-202ENST00000359082 DZIP1Q86YF9 867 aaKnown RBP21.36■■□□□ 1.01
SHANK1-202ENST00000359082 NUP88Q99567 741 aaPredicted RBP21.36■■□□□ 1.01
SHANK1-202ENST00000359082 ANO10Q9NW15 660 aa21.36■■□□□ 1.01
SHANK1-202ENST00000359082 RANBP6O60518 1105 aaKnown RBP21.36■■□□□ 1.01
SHANK1-202ENST00000359082 PTCD1O75127 700 aaKnown RBP21.36■■□□□ 1.01
SHANK1-202ENST00000359082 CCDC183Q5T5S1 534 aa21.36■■□□□ 1.01
SHANK1-202ENST00000359082 SYNJ1O43426 1573 aa21.36■■□□□ 1.01
SHANK1-202ENST00000359082 TOP1P11387 765 aaKnown RBP21.36■■□□□ 1.01
SHANK1-202ENST00000359082 TROQ12816 1431 aaPredicted RBP21.36■■□□□ 1.01
SHANK1-202ENST00000359082 CPLX3Q8WVH0 158 aa21.36■■□□□ 1.01
SHANK1-202ENST00000359082 USHBP1Q8N6Y0 703 aa21.36■■□□□ 1.01
SHANK1-202ENST00000359082 IFFO1Q0D2I5 559 aa21.35■■□□□ 1.01
SHANK1-202ENST00000359082 CLIP2Q9UDT6 1046 aa21.35■■□□□ 1.01
SHANK1-202ENST00000359082 ZPR1O75312 459 aa21.35■■□□□ 1.01
SHANK1-202ENST00000359082 SSRP1Q08945 709 aaKnown RBP21.35■■□□□ 1.01
SHANK1-202ENST00000359082 LUZP1Q86V48 1076 aa21.35■■□□□ 1.01
SHANK1-202ENST00000359082 C8orf76Q96K31 380 aa21.35■■□□□ 1.01
SHANK1-202ENST00000359082 URI1O94763 535 aaPredicted RBP21.35■■□□□ 1.01
SHANK1-202ENST00000359082 TMOD3Q9NYL9 352 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms