RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 OVOS2A0A0G2JMS6 1433 aa18.69■□□□□ 0.58
GABPB1-202ENST00000359031 NBPF6Q5VWK0 638 aa18.69■□□□□ 0.58
GABPB1-202ENST00000359031 KRT28Q7Z3Y7 464 aa18.69■□□□□ 0.58
GABPB1-202ENST00000359031 USHBP1Q8N6Y0 703 aa18.69■□□□□ 0.58
GABPB1-202ENST00000359031 IL17REQ8NFR9 667 aa18.69■□□□□ 0.58
GABPB1-202ENST00000359031 NGLY1Q96IV0 654 aa18.69■□□□□ 0.58
GABPB1-202ENST00000359031 NBPF4Q96M43 638 aa18.69■□□□□ 0.58
GABPB1-202ENST00000359031 DAXXQ9UER7 740 aaPredicted RBP18.69■□□□□ 0.58
GABPB1-202ENST00000359031 SEC24BO95487 1268 aa18.68■□□□□ 0.58
GABPB1-202ENST00000359031 SLC4A2P04920 1241 aa18.68■□□□□ 0.58
GABPB1-202ENST00000359031 TAF7Q15545 349 aaPredicted RBP18.68■□□□□ 0.58
GABPB1-202ENST00000359031 STK31Q9BXU1 1019 aa18.68■□□□□ 0.58
GABPB1-202ENST00000359031 PXDNLA1KZ92 1463 aa18.68■□□□□ 0.58
GABPB1-202ENST00000359031 ABCC6O95255 1503 aa18.68■□□□□ 0.58
GABPB1-202ENST00000359031 SIRT2Q8IXJ6 389 aa18.67■□□□□ 0.58
GABPB1-202ENST00000359031 RGPD5Q99666 1765 aa18.67■□□□□ 0.58
GABPB1-202ENST00000359031 CCDC30Q5VVM6 783 aa18.67■□□□□ 0.58
GABPB1-202ENST00000359031 LNPKQ9C0E8 428 aa18.67■□□□□ 0.58
GABPB1-202ENST00000359031 CCT4P50991 539 aaKnown RBP18.66■□□□□ 0.58
GABPB1-202ENST00000359031 XPCQ01831 940 aaPredicted RBP18.66■□□□□ 0.58
GABPB1-202ENST00000359031 ADAMTS7Q9UKP4 1686 aa18.65■□□□□ 0.58
GABPB1-202ENST00000359031 ZBTB7CA1YPR0 619 aa18.65■□□□□ 0.58
GABPB1-202ENST00000359031 AMOTQ4VCS5 1084 aa18.65■□□□□ 0.58
GABPB1-202ENST00000359031 RPAP2Q8IXW5 612 aaPredicted RBP18.65■□□□□ 0.58
GABPB1-202ENST00000359031 ANKRD44Q8N8A2 993 aa18.65■□□□□ 0.58
GABPB1-202ENST00000359031 TBC1D32Q96NH3 1257 aa18.65■□□□□ 0.58
GABPB1-202ENST00000359031 CRYBG1Q9Y4K1 1723 aa18.64■□□□□ 0.58
GABPB1-202ENST00000359031 PLEKHO1Q53GL0 409 aaPredicted RBP18.64■□□□□ 0.57
GABPB1-202ENST00000359031 SIPA1L3O60292 1781 aaPredicted RBP18.64■□□□□ 0.57
GABPB1-202ENST00000359031 AKAP4Q5JQC9 854 aa18.63■□□□□ 0.57
GABPB1-202ENST00000359031 ANKRD45Q5TZF3 282 aa18.63■□□□□ 0.57
GABPB1-202ENST00000359031 ANKRD24Q8TF21 1146 aa18.63■□□□□ 0.57
GABPB1-202ENST00000359031 BMP2KLQ5H9B9 411 aa18.63■□□□□ 0.57
GABPB1-202ENST00000359031 LMOD2Q6P5Q4 547 aa18.63■□□□□ 0.57
GABPB1-202ENST00000359031 USP21Q9UK80 565 aa18.63■□□□□ 0.57
GABPB1-202ENST00000359031 COL18A1P39060 1754 aa18.62■□□□□ 0.57
GABPB1-202ENST00000359031 G2E3Q7L622 706 aa18.62■□□□□ 0.57
GABPB1-202ENST00000359031 CHMP4AQ9BY43 222 aa18.62■□□□□ 0.57
GABPB1-202ENST00000359031 DCTPP1Q9H773 170 aa18.62■□□□□ 0.57
GABPB1-202ENST00000359031 PXDNQ92626 1479 aa18.62■□□□□ 0.57
GABPB1-202ENST00000359031 HOXB7P09629 217 aa18.61■□□□□ 0.57
GABPB1-202ENST00000359031 CEP85Q6P2H3 762 aa18.61■□□□□ 0.57
GABPB1-202ENST00000359031 ZNF530Q6P9A1 599 aaPredicted RBP18.61■□□□□ 0.57
GABPB1-202ENST00000359031 TNS3Q68CZ2 1445 aa18.61■□□□□ 0.57
GABPB1-202ENST00000359031 FLIIQ13045 1269 aa18.6■□□□□ 0.57
GABPB1-202ENST00000359031 BECN1Q14457 450 aa18.6■□□□□ 0.57
GABPB1-202ENST00000359031 MEIS3Q99687 375 aa18.6■□□□□ 0.57
GABPB1-202ENST00000359031 TRPC5Q9UL62 973 aaPredicted RBP18.6■□□□□ 0.57
GABPB1-202ENST00000359031 PLEKHG2Q9H7P9 1386 aa18.6■□□□□ 0.57
GABPB1-202ENST00000359031 NPHP3Q7Z494 1330 aa18.6■□□□□ 0.57
GABPB1-202ENST00000359031 NBR1Q14596 966 aa18.59■□□□□ 0.57
GABPB1-202ENST00000359031 ERBB3P21860 1342 aa18.58■□□□□ 0.57
GABPB1-202ENST00000359031 HMMRO75330 724 aa18.58■□□□□ 0.56
GABPB1-202ENST00000359031 RTL5Q5HYW3 569 aaPredicted RBP18.58■□□□□ 0.56
GABPB1-202ENST00000359031 C1orf141Q5JVX7 400 aa18.58■□□□□ 0.56
GABPB1-202ENST00000359031 FKBP5Q13451 457 aaPredicted RBP18.57■□□□□ 0.56
GABPB1-202ENST00000359031 HDGFL1Q5TGJ6 251 aa18.57■□□□□ 0.56
GABPB1-202ENST00000359031 F6X3S4 739 aa18.56■□□□□ 0.56
GABPB1-202ENST00000359031 TEFQ10587 303 aa18.56■□□□□ 0.56
GABPB1-202ENST00000359031 SLC4A10Q6U841 1118 aa18.56■□□□□ 0.56
GABPB1-202ENST00000359031 SCN11AQ9UI33 1791 aa18.56■□□□□ 0.56
GABPB1-202ENST00000359031 SOS2Q07890 1332 aaPredicted RBP18.56■□□□□ 0.56
GABPB1-202ENST00000359031 SLC4A3P48751 1232 aa18.56■□□□□ 0.56
GABPB1-202ENST00000359031 EIF4A1P60842 406 aaKnown RBP18.56■□□□□ 0.56
GABPB1-202ENST00000359031 LGR6Q9HBX8 967 aa18.56■□□□□ 0.56
GABPB1-202ENST00000359031 USP35Q9P2H5 1018 aa18.56■□□□□ 0.56
GABPB1-202ENST00000359031 RNMTO43148 476 aaKnown RBP18.55■□□□□ 0.56
GABPB1-202ENST00000359031 GNAI3P08754 354 aa18.55■□□□□ 0.56
GABPB1-202ENST00000359031 MFAP1P55081 439 aaKnown RBP18.55■□□□□ 0.56
GABPB1-202ENST00000359031 C22orf23Q9BZE7 217 aa18.55■□□□□ 0.56
GABPB1-202ENST00000359031 AXIN2Q9Y2T1 843 aa18.55■□□□□ 0.56
GABPB1-202ENST00000359031 GNAI2P04899 355 aa18.54■□□□□ 0.56
GABPB1-202ENST00000359031 PKD1L3Q7Z443 1732 aa18.53■□□□□ 0.56
GABPB1-202ENST00000359031 EIF5BO60841 1220 aaKnown RBP18.53■□□□□ 0.56
GABPB1-202ENST00000359031 BTBD11A6QL63 1104 aa18.52■□□□□ 0.56
GABPB1-202ENST00000359031 ATRNO75882 1429 aa18.52■□□□□ 0.56
GABPB1-202ENST00000359031 PLEKHG5O94827 1062 aa18.52■□□□□ 0.55
GABPB1-202ENST00000359031 FNBP4Q8N3X1 1017 aaPredicted RBP18.52■□□□□ 0.55
GABPB1-202ENST00000359031 NECTIN2Q92692 538 aa18.52■□□□□ 0.55
GABPB1-202ENST00000359031 ZC3H6P61129 1189 aaKnown RBP18.51■□□□□ 0.55
GABPB1-202ENST00000359031 MPRIPQ6WCQ1 1025 aa18.51■□□□□ 0.55
GABPB1-202ENST00000359031 PLEKHM2Q8IWE5 1019 aa18.51■□□□□ 0.55
GABPB1-202ENST00000359031 CPDO75976 1380 aa18.51■□□□□ 0.55
GABPB1-202ENST00000359031 SPATA31A3Q5VYP0 1347 aa18.51■□□□□ 0.55
GABPB1-202ENST00000359031 PARP4Q9UKK3 1724 aaKnown RBP18.5■□□□□ 0.55
GABPB1-202ENST00000359031 HEG1Q9ULI3 1381 aa18.49■□□□□ 0.55
GABPB1-202ENST00000359031 CDC45O75419 566 aa18.49■□□□□ 0.55
GABPB1-202ENST00000359031 RBM25P49756 843 aaKnown RBP18.49■□□□□ 0.55
GABPB1-202ENST00000359031 MRC1P22897 1456 aa18.49■□□□□ 0.55
GABPB1-202ENST00000359031 TTC22Q5TAA0 569 aa18.49■□□□□ 0.55
GABPB1-202ENST00000359031 RAPGEF4Q8WZA2 1011 aa18.49■□□□□ 0.55
GABPB1-202ENST00000359031 COL22A1Q8NFW1 1626 aaPredicted RBP18.48■□□□□ 0.55
GABPB1-202ENST00000359031 MEGF6O75095 1541 aa18.48■□□□□ 0.55
GABPB1-202ENST00000359031 CCDC125Q86Z20 511 aa18.48■□□□□ 0.55
GABPB1-202ENST00000359031 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.48■□□□□ 0.55
GABPB1-202ENST00000359031 ABCA3Q99758 1704 aa18.47■□□□□ 0.55
GABPB1-202ENST00000359031 GSPT1P15170 499 aaKnown RBP18.47■□□□□ 0.55
GABPB1-202ENST00000359031 TATP17735 454 aaPredicted RBP18.47■□□□□ 0.55
GABPB1-202ENST00000359031 TBC1D9Q6ZT07 1266 aa18.47■□□□□ 0.55
GABPB1-202ENST00000359031 TUBGCP6Q96RT7 1819 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms