RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 IRX3P78415 501 aaPredicted RBP13.61□□□□□ -0.23
CNOT3-202ENST00000358389 AEBP2Q6ZN18 517 aaPredicted RBP13.61□□□□□ -0.23
CNOT3-202ENST00000358389 ARHGAP45Q92619 1136 aa13.61□□□□□ -0.23
CNOT3-202ENST00000358389 INTS4Q96HW7 963 aaKnown RBP13.61□□□□□ -0.23
CNOT3-202ENST00000358389 TNMDQ9H2S6 317 aa13.61□□□□□ -0.23
CNOT3-202ENST00000358389 MBIPQ9NS73 344 aa13.61□□□□□ -0.23
CNOT3-202ENST00000358389 RPAP2Q8IXW5 612 aaPredicted RBP13.61□□□□□ -0.23
CNOT3-202ENST00000358389 ESYT1Q9BSJ8 1104 aa13.61□□□□□ -0.23
CNOT3-202ENST00000358389 ANKRD44Q8N8A2 993 aa13.6□□□□□ -0.23
CNOT3-202ENST00000358389 NGDNQ8NEJ9 315 aaKnown RBP13.6□□□□□ -0.23
CNOT3-202ENST00000358389 FAM200AQ8TCP9 573 aa13.6□□□□□ -0.23
CNOT3-202ENST00000358389 DDX54Q8TDD1 881 aaKnown RBP13.6□□□□□ -0.23
CNOT3-202ENST00000358389 ZNF518AQ6AHZ1 1483 aa13.6□□□□□ -0.23
CNOT3-202ENST00000358389 ARHGAP5Q13017 1502 aa13.6□□□□□ -0.23
CNOT3-202ENST00000358389 PDE1AP54750 535 aa13.6□□□□□ -0.23
CNOT3-202ENST00000358389 KRT24Q2M2I5 525 aa13.6□□□□□ -0.23
CNOT3-202ENST00000358389 MEIS3Q99687 375 aa13.6□□□□□ -0.23
CNOT3-202ENST00000358389 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.6□□□□□ -0.23
CNOT3-202ENST00000358389 PTPRTO14522 1441 aa13.6□□□□□ -0.23
CNOT3-202ENST00000358389 SYNJ2O15056 1496 aa13.6□□□□□ -0.23
CNOT3-202ENST00000358389 CROCC2H7BZ55 1655 aa13.59□□□□□ -0.23
CNOT3-202ENST00000358389 SYT1P21579 422 aa13.59□□□□□ -0.23
CNOT3-202ENST00000358389 TEX35Q5T0J7 233 aa13.59□□□□□ -0.23
CNOT3-202ENST00000358389 CCDC83Q8IWF9 413 aa13.59□□□□□ -0.23
CNOT3-202ENST00000358389 BICD2Q8TD16 824 aa13.59□□□□□ -0.23
CNOT3-202ENST00000358389 TMX1Q9H3N1 280 aa13.59□□□□□ -0.23
CNOT3-202ENST00000358389 IQSEC2Q5JU85 1478 aa13.59□□□□□ -0.23
CNOT3-202ENST00000358389 ANO6Q4KMQ2 910 aa13.59□□□□□ -0.23
CNOT3-202ENST00000358389 CD109Q6YHK3 1445 aa13.59□□□□□ -0.23
CNOT3-202ENST00000358389 AMPHP49418 695 aa13.58□□□□□ -0.23
CNOT3-202ENST00000358389 CUL4AQ13619 759 aa13.58□□□□□ -0.23
CNOT3-202ENST00000358389 CEP85Q6P2H3 762 aa13.58□□□□□ -0.23
CNOT3-202ENST00000358389 ATP10BO94823 1461 aa13.58□□□□□ -0.23
CNOT3-202ENST00000358389 BECN2A8MW95 431 aa13.58□□□□□ -0.24
CNOT3-202ENST00000358389 TULP1O00294 542 aaPredicted RBP13.58□□□□□ -0.24
CNOT3-202ENST00000358389 PHACTR3Q96KR7 559 aa13.58□□□□□ -0.24
CNOT3-202ENST00000358389 KDM5AP29375 1690 aaKnown RBP13.58□□□□□ -0.24
CNOT3-202ENST00000358389 FAM83GA6ND36 823 aa13.58□□□□□ -0.24
CNOT3-202ENST00000358389 F13A1P00488 732 aa13.58□□□□□ -0.24
CNOT3-202ENST00000358389 TYRO3Q06418 890 aa13.58□□□□□ -0.24
CNOT3-202ENST00000358389 KMT5BQ4FZB7 885 aa13.58□□□□□ -0.24
CNOT3-202ENST00000358389 MORC2Q9Y6X9 1032 aaPredicted RBP13.58□□□□□ -0.24
CNOT3-202ENST00000358389 SYTL4Q96C24 671 aaPredicted RBP13.57□□□□□ -0.24
CNOT3-202ENST00000358389 LAMC1P11047 1609 aa13.57□□□□□ -0.24
CNOT3-202ENST00000358389 IFT140Q96RY7 1462 aa13.57□□□□□ -0.24
CNOT3-202ENST00000358389 CFAP74Q9C0B2 1584 aa13.57□□□□□ -0.24
CNOT3-202ENST00000358389 VGFO15240 615 aaPredicted RBP13.57□□□□□ -0.24
CNOT3-202ENST00000358389 FCHSD2O94868 740 aa13.57□□□□□ -0.24
CNOT3-202ENST00000358389 ZSCAN25Q6NSZ9 544 aa13.57□□□□□ -0.24
CNOT3-202ENST00000358389 MRC2Q9UBG0 1479 aa13.57□□□□□ -0.24
CNOT3-202ENST00000358389 CPA1P15085 419 aa13.57□□□□□ -0.24
CNOT3-202ENST00000358389 NFE2L2Q16236 605 aa13.57□□□□□ -0.24
CNOT3-202ENST00000358389 FAM173BQ6P4H8 233 aa13.57□□□□□ -0.24
CNOT3-202ENST00000358389 CCDC9Q9Y3X0 531 aaKnown RBP13.57□□□□□ -0.24
CNOT3-202ENST00000358389 HNRNPH2P55795 449 aaKnown RBP13.56□□□□□ -0.24
CNOT3-202ENST00000358389 FBXO38Q6PIJ6 1188 aa13.56□□□□□ -0.24
CNOT3-202ENST00000358389 TFIP11Q9UBB9 837 aaKnown RBP13.56□□□□□ -0.24
CNOT3-202ENST00000358389 SYCP2Q9BX26 1530 aa13.56□□□□□ -0.24
CNOT3-202ENST00000358389 ZNF165P49910 485 aa13.56□□□□□ -0.24
CNOT3-202ENST00000358389 HOMER1Q86YM7 354 aa13.56□□□□□ -0.24
CNOT3-202ENST00000358389 IL1RAPL2Q9NP60 686 aa13.56□□□□□ -0.24
CNOT3-202ENST00000358389 ABCC4O15439 1325 aa13.55□□□□□ -0.24
CNOT3-202ENST00000358389 GJB2P29033 226 aa13.55□□□□□ -0.24
CNOT3-202ENST00000358389 BMS1Q14692 1282 aaKnown RBP13.55□□□□□ -0.24
CNOT3-202ENST00000358389 NEK11Q8NG66 645 aa13.55□□□□□ -0.24
CNOT3-202ENST00000358389 DNAJC25Q9H1X3 360 aa13.55□□□□□ -0.24
CNOT3-202ENST00000358389 F6X3S4 739 aa13.55□□□□□ -0.24
CNOT3-202ENST00000358389 SKILP12757 684 aa13.55□□□□□ -0.24
CNOT3-202ENST00000358389 DACT1Q9NYF0 836 aa13.55□□□□□ -0.24
CNOT3-202ENST00000358389 ADAMTS12P58397 1594 aa13.55□□□□□ -0.24
CNOT3-202ENST00000358389 KRT85P78386 507 aa13.54□□□□□ -0.24
CNOT3-202ENST00000358389 C10orf67Q8IYJ2 551 aa13.54□□□□□ -0.24
CNOT3-202ENST00000358389 CACTINQ8WUQ7 758 aaKnown RBP13.54□□□□□ -0.24
CNOT3-202ENST00000358389 CBX8Q9HC52 389 aa13.54□□□□□ -0.24
CNOT3-202ENST00000358389 ARHGAP31Q2M1Z3 1444 aa13.54□□□□□ -0.24
CNOT3-202ENST00000358389 TSPYL1Q9H0U9 437 aa13.54□□□□□ -0.24
CNOT3-202ENST00000358389 CDC42BPAQ5VT25 1732 aa13.54□□□□□ -0.24
CNOT3-202ENST00000358389 LARP1BQ659C4 914 aaKnown RBP13.54□□□□□ -0.24
CNOT3-202ENST00000358389 LRRCC1Q9C099 1032 aa13.54□□□□□ -0.24
CNOT3-202ENST00000358389 CASTP20810 708 aaKnown RBP13.54□□□□□ -0.24
CNOT3-202ENST00000358389 GNL2Q13823 731 aaKnown RBP13.54□□□□□ -0.24
CNOT3-202ENST00000358389 NCBP3Q53F19 620 aaKnown RBP13.54□□□□□ -0.24
CNOT3-202ENST00000358389 LIMCH1Q9UPQ0 1083 aa13.54□□□□□ -0.24
CNOT3-202ENST00000358389 SLU7O95391 586 aaKnown RBP13.53□□□□□ -0.24
CNOT3-202ENST00000358389 SLC4A2P04920 1241 aa13.53□□□□□ -0.24
CNOT3-202ENST00000358389 CHMLP26374 656 aa13.53□□□□□ -0.24
CNOT3-202ENST00000358389 AK2P54819 239 aa13.53□□□□□ -0.24
CNOT3-202ENST00000358389 CSB-PGBD3P0DP91 1061 aa13.53□□□□□ -0.24
CNOT3-202ENST00000358389 ZNF75DP51815 510 aa13.53□□□□□ -0.24
CNOT3-202ENST00000358389 CEBPZQ03701 1054 aaKnown RBP13.53□□□□□ -0.24
CNOT3-202ENST00000358389 RSPH14Q9UHP6 348 aa13.53□□□□□ -0.24
CNOT3-202ENST00000358389 ANAPC15P60006 121 aa13.53□□□□□ -0.24
CNOT3-202ENST00000358389 ARID5BQ14865 1188 aa13.53□□□□□ -0.24
CNOT3-202ENST00000358389 ERCC6LQ2NKX8 1250 aa13.53□□□□□ -0.24
CNOT3-202ENST00000358389 COG3Q96JB2 828 aa13.53□□□□□ -0.24
CNOT3-202ENST00000358389 LIG1P18858 919 aa13.52□□□□□ -0.24
CNOT3-202ENST00000358389 GPS2Q13227 327 aa13.52□□□□□ -0.24
CNOT3-202ENST00000358389 NECAB1Q8N987 351 aa13.52□□□□□ -0.24
CNOT3-202ENST00000358389 FYB1O15117 783 aa13.52□□□□□ -0.25
CNOT3-202ENST00000358389 CAPN2P17655 700 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms