RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 PPM1EQ8WY54 764 aa7.64□□□□□ -1.19
VPS13B-202ENST00000357162 IBTKQ9P2D0 1353 aaPredicted RBP7.64□□□□□ -1.19
VPS13B-202ENST00000357162 HSPA4P34932 840 aa7.64□□□□□ -1.19
VPS13B-202ENST00000357162 NAIPQ13075 1403 aa7.64□□□□□ -1.19
VPS13B-202ENST00000357162 ARFGAP2Q8N6H7 521 aa7.64□□□□□ -1.19
VPS13B-202ENST00000357162 PTPRCP08575 1304 aa7.64□□□□□ -1.19
VPS13B-202ENST00000357162 SEPT7Q16181 437 aaKnown RBP7.64□□□□□ -1.19
VPS13B-202ENST00000357162 TOMM22Q9NS69 142 aa7.64□□□□□ -1.19
VPS13B-202ENST00000357162 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.64□□□□□ -1.19
VPS13B-202ENST00000357162 TAF4BQ92750 862 aa7.64□□□□□ -1.19
VPS13B-202ENST00000357162 LNPKQ9C0E8 428 aa7.64□□□□□ -1.19
VPS13B-202ENST00000357162 NINQ8N4C6 2090 aa7.64□□□□□ -1.19
VPS13B-202ENST00000357162 TRIM21P19474 475 aaKnown RBP7.64□□□□□ -1.19
VPS13B-202ENST00000357162 CEP112Q8N8E3 955 aa7.64□□□□□ -1.19
VPS13B-202ENST00000357162 CCDC57Q2TAC2 916 aa7.64□□□□□ -1.19
VPS13B-202ENST00000357162 CCDC102AQ96A19 550 aa7.64□□□□□ -1.19
VPS13B-202ENST00000357162 C6orf163Q5TEZ5 329 aa7.64□□□□□ -1.19
VPS13B-202ENST00000357162 HSP90AB2PQ58FF8 381 aa7.63□□□□□ -1.19
VPS13B-202ENST00000357162 C10orf67Q8IYJ2 551 aa7.63□□□□□ -1.19
VPS13B-202ENST00000357162 CCDC43Q96MW1 224 aaKnown RBP7.63□□□□□ -1.19
VPS13B-202ENST00000357162 NPHP3Q7Z494 1330 aa7.63□□□□□ -1.19
VPS13B-202ENST00000357162 POTEJP0CG39 1038 aa7.63□□□□□ -1.19
VPS13B-202ENST00000357162 PLIN1O60240 522 aa7.63□□□□□ -1.19
VPS13B-202ENST00000357162 AIMP1Q12904 312 aaKnown RBP7.63□□□□□ -1.19
VPS13B-202ENST00000357162 RAB34Q9BZG1 259 aa7.63□□□□□ -1.19
VPS13B-202ENST00000357162 LIMCH1Q9UPQ0 1083 aa7.63□□□□□ -1.19
VPS13B-202ENST00000357162 AMER1Q5JTC6 1135 aaPredicted RBP7.63□□□□□ -1.19
VPS13B-202ENST00000357162 GRIN2BQ13224 1484 aa7.63□□□□□ -1.19
VPS13B-202ENST00000357162 CLGNO14967 610 aa7.63□□□□□ -1.19
VPS13B-202ENST00000357162 CCDC27Q2M243 656 aa7.63□□□□□ -1.19
VPS13B-202ENST00000357162 YEATS4O95619 227 aa7.63□□□□□ -1.19
VPS13B-202ENST00000357162 CHMP3Q9Y3E7 222 aa7.63□□□□□ -1.19
VPS13B-202ENST00000357162 SH2D4BQ5SQS7 431 aa7.63□□□□□ -1.19
VPS13B-202ENST00000357162 SMC5Q8IY18 1101 aa7.63□□□□□ -1.19
VPS13B-202ENST00000357162 ZNF287Q9HBT7 754 aa7.63□□□□□ -1.19
VPS13B-202ENST00000357162 RPRD2Q5VT52 1461 aaKnown RBP7.63□□□□□ -1.19
VPS13B-202ENST00000357162 IRX3P78415 501 aaPredicted RBP7.63□□□□□ -1.19
VPS13B-202ENST00000357162 SYCP1Q15431 976 aa7.63□□□□□ -1.19
VPS13B-202ENST00000357162 CCDC38Q502W7 563 aa7.63□□□□□ -1.19
VPS13B-202ENST00000357162 DHX37Q8IY37 1157 aaKnown RBP7.63□□□□□ -1.19
VPS13B-202ENST00000357162 BLOC1S2Q6QNY1 142 aa7.63□□□□□ -1.19
VPS13B-202ENST00000357162 RBM27Q9P2N5 1060 aaKnown RBP7.63□□□□□ -1.19
VPS13B-202ENST00000357162 SPTA1P02549 2419 aa7.62□□□□□ -1.19
VPS13B-202ENST00000357162 PAXIP1Q6ZW49 1069 aaPredicted RBP7.62□□□□□ -1.19
VPS13B-202ENST00000357162 PANK1Q8TE04 598 aa7.62□□□□□ -1.19
VPS13B-202ENST00000357162 FSD1Q9BTV5 496 aa7.62□□□□□ -1.19
VPS13B-202ENST00000357162 HSP90AB3PQ58FF7 597 aa7.62□□□□□ -1.19
VPS13B-202ENST00000357162 LRRC27Q9C0I9 530 aa7.62□□□□□ -1.19
VPS13B-202ENST00000357162 PAFAH1B1P43034 410 aa7.62□□□□□ -1.19
VPS13B-202ENST00000357162 JAKMIP2Q96AA8 810 aa7.62□□□□□ -1.19
VPS13B-202ENST00000357162 STAMBPO95630 424 aa7.62□□□□□ -1.19
VPS13B-202ENST00000357162 FOXD1Q16676 465 aa7.62□□□□□ -1.19
VPS13B-202ENST00000357162 ARHGAP25P42331 645 aa7.62□□□□□ -1.19
VPS13B-202ENST00000357162 EBAG9O00559 213 aa7.62□□□□□ -1.19
VPS13B-202ENST00000357162 RPGRIP1Q96KN7 1286 aa7.62□□□□□ -1.19
VPS13B-202ENST00000357162 CDK5RAP3Q96JB5 506 aa7.62□□□□□ -1.19
VPS13B-202ENST00000357162 ZNF692Q9BU19 519 aaPredicted RBP7.62□□□□□ -1.19
VPS13B-202ENST00000357162 PEG3Q9GZU2 1588 aa7.62□□□□□ -1.19
VPS13B-202ENST00000357162 PLCD4Q9BRC7 762 aa7.61□□□□□ -1.19
VPS13B-202ENST00000357162 ZMYND15Q9H091 742 aa7.61□□□□□ -1.19
VPS13B-202ENST00000357162 PPP2R5EQ16537 467 aa7.61□□□□□ -1.19
VPS13B-202ENST00000357162 PDILTQ8N807 584 aa7.61□□□□□ -1.19
VPS13B-202ENST00000357162 NGDNQ8NEJ9 315 aaKnown RBP7.61□□□□□ -1.19
VPS13B-202ENST00000357162 SMARCC1Q92922 1105 aaPredicted RBP7.61□□□□□ -1.19
VPS13B-202ENST00000357162 SLFN5Q08AF3 891 aa7.61□□□□□ -1.19
VPS13B-202ENST00000357162 NDC80O14777 642 aa7.61□□□□□ -1.19
VPS13B-202ENST00000357162 PPP4R3BQ5MIZ7 849 aa7.61□□□□□ -1.19
VPS13B-202ENST00000357162 TEX14Q8IWB6 1497 aa7.61□□□□□ -1.19
VPS13B-202ENST00000357162 CLIP2Q9UDT6 1046 aa7.61□□□□□ -1.19
VPS13B-202ENST00000357162 ANKRD18BA2A2Z9 1011 aa7.61□□□□□ -1.19
VPS13B-202ENST00000357162 CETN1Q12798 172 aa7.61□□□□□ -1.19
VPS13B-202ENST00000357162 DNMBPQ6XZF7 1577 aa7.61□□□□□ -1.19
VPS13B-202ENST00000357162 LRSAM1Q6UWE0 723 aa7.61□□□□□ -1.19
VPS13B-202ENST00000357162 UHRF1BP1Q6BDS2 1440 aa7.61□□□□□ -1.19
VPS13B-202ENST00000357162 MNAT1P51948 309 aa7.6□□□□□ -1.19
VPS13B-202ENST00000357162 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.6□□□□□ -1.197e-7■■□□□ 13.2
VPS13B-202ENST00000357162 KIF1BPQ96EK5 621 aa7.6□□□□□ -1.19
VPS13B-202ENST00000357162 RSRC1Q96IZ7 334 aaKnown RBP7.6□□□□□ -1.19
VPS13B-202ENST00000357162 FOXD4L1Q9NU39 408 aa7.6□□□□□ -1.19
VPS13B-202ENST00000357162 CPSF2Q9P2I0 782 aaKnown RBP7.6□□□□□ -1.19
VPS13B-202ENST00000357162 SYCE3A1L190 88 aa7.6□□□□□ -1.19
VPS13B-202ENST00000357162 SREK1Q8WXA9 508 aaKnown RBP7.6□□□□□ -1.19
VPS13B-202ENST00000357162 FYB1O15117 783 aa7.6□□□□□ -1.19
VPS13B-202ENST00000357162 CASTP20810 708 aaKnown RBP7.6□□□□□ -1.19
VPS13B-202ENST00000357162 TOP1P11387 765 aaKnown RBP7.6□□□□□ -1.19
VPS13B-202ENST00000357162 AOX1Q06278 1338 aa7.6□□□□□ -1.19
VPS13B-202ENST00000357162 CASQ1P31415 396 aa7.6□□□□□ -1.19
VPS13B-202ENST00000357162 SARNPP82979 210 aaKnown RBP7.6□□□□□ -1.19
VPS13B-202ENST00000357162 TNPO1Q92973 898 aaKnown RBP7.6□□□□□ -1.19
VPS13B-202ENST00000357162 IFT74Q96LB3 600 aa7.6□□□□□ -1.19
VPS13B-202ENST00000357162 CFAP57Q96MR6 1250 aa7.6□□□□□ -1.19
VPS13B-202ENST00000357162 RASAL2Q9UJF2 1139 aa7.6□□□□□ -1.19
VPS13B-202ENST00000357162 CEP83Q9Y592 693 aa7.6□□□□□ -1.19
VPS13B-202ENST00000357162 SLC4A3P48751 1232 aa7.6□□□□□ -1.19
VPS13B-202ENST00000357162 ENOX2Q16206 610 aaKnown RBP7.6□□□□□ -1.19
VPS13B-202ENST00000357162 TSGA10Q9BZW7 698 aa7.6□□□□□ -1.19
VPS13B-202ENST00000357162 KIF14Q15058 1648 aa7.6□□□□□ -1.19
VPS13B-202ENST00000357162 NOL8Q76FK4 1167 aaKnown RBP7.6□□□□□ -1.19
VPS13B-202ENST00000357162 JPH4Q96JJ6 628 aa7.6□□□□□ -1.19
VPS13B-202ENST00000357162 RMND1Q9NWS8 449 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms