RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 GBP3Q9H0R5 595 aa18.75■□□□□ 0.59
RXRA-201ENST00000356384 CIZ1Q9ULV3 898 aaPredicted RBP18.75■□□□□ 0.59
RXRA-201ENST00000356384 SFPQP23246 707 aaKnown RBP eCLIP18.75■□□□□ 0.592e-6■■■■□ 24
RXRA-201ENST00000356384 ANAPC15P60006 121 aa18.75■□□□□ 0.59
RXRA-201ENST00000356384 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.75■□□□□ 0.592e-6■■■■□ 21.1
RXRA-201ENST00000356384 CABP1Q9NZU7 370 aa18.75■□□□□ 0.59
RXRA-201ENST00000356384 RRBP1Q9P2E9 1410 aaKnown RBP18.75■□□□□ 0.59
RXRA-201ENST00000356384 CDK19Q9BWU1 502 aa18.74■□□□□ 0.59
RXRA-201ENST00000356384 PTPN14Q15678 1187 aa18.74■□□□□ 0.59
RXRA-201ENST00000356384 ABCF2Q9UG63 623 aa18.74■□□□□ 0.59
RXRA-201ENST00000356384 BTBD11A6QL63 1104 aa18.74■□□□□ 0.59
RXRA-201ENST00000356384 CCDC83Q8IWF9 413 aa18.74■□□□□ 0.59
RXRA-201ENST00000356384 WDR63Q8IWG1 891 aa18.74■□□□□ 0.59
RXRA-201ENST00000356384 BIVM-ERCC5R4GMW8 1640 aa18.73■□□□□ 0.59
RXRA-201ENST00000356384 SYNJ2O15056 1496 aa18.73■□□□□ 0.59
RXRA-201ENST00000356384 DNA2P51530 1060 aa18.73■□□□□ 0.59
RXRA-201ENST00000356384 GIMAP7Q8NHV1 300 aa18.73■□□□□ 0.59
RXRA-201ENST00000356384 CASQ1P31415 396 aa18.72■□□□□ 0.59
RXRA-201ENST00000356384 FKBP15Q5T1M5 1219 aa18.72■□□□□ 0.59
RXRA-201ENST00000356384 TRIM21P19474 475 aaKnown RBP18.72■□□□□ 0.59
RXRA-201ENST00000356384 IGHMBP2P38935 993 aaKnown RBP18.72■□□□□ 0.59
RXRA-201ENST00000356384 CCDC178Q5BJE1 867 aa18.72■□□□□ 0.59
RXRA-201ENST00000356384 GOPCQ9HD26 462 aa18.72■□□□□ 0.59
RXRA-201ENST00000356384 GSTTP1A0A1W2PQM5 241 aa18.72■□□□□ 0.59
RXRA-201ENST00000356384 ZSCAN12O43309 604 aa18.72■□□□□ 0.59
RXRA-201ENST00000356384 CACNA2D4Q7Z3S7 1137 aa18.72■□□□□ 0.59
RXRA-201ENST00000356384 KIF5CO60282 957 aa18.72■□□□□ 0.59
RXRA-201ENST00000356384 NBPF1Q3BBV0 1214 aa18.72■□□□□ 0.59
RXRA-201ENST00000356384 UBA5Q9GZZ9 404 aa18.72■□□□□ 0.59
RXRA-201ENST00000356384 URI1O94763 535 aaPredicted RBP18.72■□□□□ 0.59
RXRA-201ENST00000356384 KIF4BQ2VIQ3 1234 aa18.72■□□□□ 0.59
RXRA-201ENST00000356384 LUZP1Q86V48 1076 aa18.72■□□□□ 0.59
RXRA-201ENST00000356384 SEC63Q9UGP8 760 aaKnown RBP18.71■□□□□ 0.59
RXRA-201ENST00000356384 IFFO1Q0D2I5 559 aa18.71■□□□□ 0.59
RXRA-201ENST00000356384 ZSCAN30Q86W11 494 aa18.71■□□□□ 0.59
RXRA-201ENST00000356384 SCAPERQ9BY12 1400 aa18.71■□□□□ 0.59
RXRA-201ENST00000356384 CHMP4BP1P59074 171 aa18.71■□□□□ 0.59
RXRA-201ENST00000356384 SCLT1Q96NL6 688 aa18.7■□□□□ 0.58
RXRA-201ENST00000356384 EXOC6BQ9Y2D4 811 aa18.7■□□□□ 0.58
RXRA-201ENST00000356384 ARHGAP5Q13017 1502 aa18.7■□□□□ 0.58
RXRA-201ENST00000356384 CUL7Q14999 1698 aa18.7■□□□□ 0.58
RXRA-201ENST00000356384 CTNNBL1Q8WYA6 563 aaPredicted RBP18.7■□□□□ 0.58
RXRA-201ENST00000356384 TSG101Q99816 390 aa18.7■□□□□ 0.58
RXRA-201ENST00000356384 PRPF40BQ6NWY9 871 aaKnown RBP18.7■□□□□ 0.58
RXRA-201ENST00000356384 KIF2AO00139 706 aaPredicted RBP18.7■□□□□ 0.58
RXRA-201ENST00000356384 NF2P35240 595 aa18.69■□□□□ 0.58
RXRA-201ENST00000356384 MINDY4BA8MYZ0 360 aa18.69■□□□□ 0.58
RXRA-201ENST00000356384 RRP9O43818 475 aaKnown RBP18.69■□□□□ 0.58
RXRA-201ENST00000356384 CBX1P83916 185 aa18.69■□□□□ 0.58
RXRA-201ENST00000356384 MAP9Q49MG5 647 aa18.69■□□□□ 0.58
RXRA-201ENST00000356384 HECW1Q76N89 1606 aa18.69■□□□□ 0.58
RXRA-201ENST00000356384 ZNF692Q9BU19 519 aaPredicted RBP18.69■□□□□ 0.58
RXRA-201ENST00000356384 BCCIPQ9P287 314 aaKnown RBP eCLIP18.69■□□□□ 0.58
RXRA-201ENST00000356384 TIAM1Q13009 1591 aa18.69■□□□□ 0.58
RXRA-201ENST00000356384 TNIP1Q15025 636 aa18.69■□□□□ 0.58
RXRA-201ENST00000356384 ANO10Q9NW15 660 aa18.69■□□□□ 0.58
RXRA-201ENST00000356384 MACROD2A1Z1Q3 448 aa18.69■□□□□ 0.58
RXRA-201ENST00000356384 UBE4AQ14139 1066 aa18.69■□□□□ 0.58
RXRA-201ENST00000356384 RRS1Q15050 365 aaKnown RBP18.69■□□□□ 0.58
RXRA-201ENST00000356384 METTL24Q5JXM2 366 aa18.69■□□□□ 0.58
RXRA-201ENST00000356384 RPAP2Q8IXW5 612 aaPredicted RBP18.69■□□□□ 0.58
RXRA-201ENST00000356384 TOP1P11387 765 aaKnown RBP18.68■□□□□ 0.58
RXRA-201ENST00000356384 TMX1Q9H3N1 280 aa18.68■□□□□ 0.58
RXRA-201ENST00000356384 PRDM11Q9NQV5 511 aa18.68■□□□□ 0.58
RXRA-201ENST00000356384 KIF18AQ8NI77 898 aa18.68■□□□□ 0.58
RXRA-201ENST00000356384 PRDM10Q9NQV6 1147 aa18.68■□□□□ 0.58
RXRA-201ENST00000356384 EHBP1L1Q8N3D4 1523 aa18.68■□□□□ 0.58
RXRA-201ENST00000356384 PDIA4P13667 645 aaKnown RBP18.68■□□□□ 0.58
RXRA-201ENST00000356384 TMOD2Q9NZR1 351 aa18.68■□□□□ 0.58
RXRA-201ENST00000356384 VPS36Q86VN1 386 aa18.68■□□□□ 0.58
RXRA-201ENST00000356384 U3KPZ7 1027 aaPredicted RBP18.68■□□□□ 0.58
RXRA-201ENST00000356384 STAMBPO95630 424 aa18.67■□□□□ 0.58
RXRA-201ENST00000356384 POLR3DP05423 398 aaPredicted RBP18.67■□□□□ 0.58
RXRA-201ENST00000356384 GUCY1B3Q02153 619 aa18.67■□□□□ 0.58
RXRA-201ENST00000356384 TICAM2Q86XR7 235 aa18.67■□□□□ 0.58
RXRA-201ENST00000356384 IQGAP2Q13576 1575 aa18.67■□□□□ 0.58
RXRA-201ENST00000356384 CPLX3Q8WVH0 158 aa18.66■□□□□ 0.58
RXRA-201ENST00000356384 RNF187Q5TA31 235 aaPredicted RBP18.66■□□□□ 0.58
RXRA-201ENST00000356384 TMEM57Q8N5G2 664 aa18.66■□□□□ 0.58
RXRA-201ENST00000356384 MKNK2Q9HBH9 465 aa18.66■□□□□ 0.58
RXRA-201ENST00000356384 TNNT1P13805 278 aa18.66■□□□□ 0.58
RXRA-201ENST00000356384 PPM1FP49593 454 aaPredicted RBP18.66■□□□□ 0.58
RXRA-201ENST00000356384 ZC3H6P61129 1189 aaKnown RBP18.66■□□□□ 0.58
RXRA-201ENST00000356384 LARP1Q6PKG0 1096 aaKnown RBP18.66■□□□□ 0.58
RXRA-201ENST00000356384 CLIP2Q9UDT6 1046 aa18.66■□□□□ 0.58
RXRA-201ENST00000356384 KIAA0586Q9BVV6 1533 aa18.65■□□□□ 0.58
RXRA-201ENST00000356384 POLR3GO15318 223 aaPredicted RBP18.65■□□□□ 0.58
RXRA-201ENST00000356384 CCDC82Q8N4S0 544 aa18.65■□□□□ 0.58
RXRA-201ENST00000356384 NUP88Q99567 741 aaPredicted RBP18.65■□□□□ 0.58
RXRA-201ENST00000356384 SMARCA5O60264 1052 aaPredicted RBP18.65■□□□□ 0.58
RXRA-201ENST00000356384 SMC1AQ14683 1233 aaKnown RBP18.65■□□□□ 0.58
RXRA-201ENST00000356384 CCDC183Q5T5S1 534 aa18.65■□□□□ 0.58
RXRA-201ENST00000356384 PPP4R3AQ6IN85 833 aa18.65■□□□□ 0.58
RXRA-201ENST00000356384 CRACR2BQ8N4Y2 399 aaPredicted RBP18.65■□□□□ 0.58
RXRA-201ENST00000356384 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.65■□□□□ 0.588e-6■■■■□ 22
RXRA-201ENST00000356384 TDRD12Q587J7 1177 aaKnown RBP18.65■□□□□ 0.58
RXRA-201ENST00000356384 THEMISQ8N1K5 641 aaPredicted RBP18.65■□□□□ 0.58
RXRA-201ENST00000356384 CDK13Q14004 1512 aaKnown RBP18.65■□□□□ 0.58
RXRA-201ENST00000356384 ZNF287Q9HBT7 754 aa18.65■□□□□ 0.58
RXRA-201ENST00000356384 ZNF608Q9ULD9 1512 aaPredicted RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms