RNA–Protein interactions for RNA: ENST00000356135.9

CHKA-202, Transcript of choline kinase alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHKA, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-202ENST00000356135 TSPYL4Q9UJ04 414 aa31.23■■■□□ 2.59
CHKA-202ENST00000356135 RBM6P78332 1123 aaKnown RBP31.22■■■□□ 2.59
CHKA-202ENST00000356135 EXOSC9Q06265 439 aaKnown RBP31.22■■■□□ 2.59
CHKA-202ENST00000356135 CABP4P57796 275 aa31.21■■■□□ 2.59
CHKA-202ENST00000356135 POTEAQ6S8J7 498 aa31.2■■■□□ 2.59
CHKA-202ENST00000356135 BTBD11A6QL63 1104 aa31.2■■■□□ 2.58
CHKA-202ENST00000356135 KCNQ3O43525 872 aa31.19■■■□□ 2.58
CHKA-202ENST00000356135 FAM182BQ5T319 152 aa31.19■■■□□ 2.58
CHKA-202ENST00000356135 ERVV-2B6SEH9 535 aa31.17■■■□□ 2.58
CHKA-202ENST00000356135 KRT24Q2M2I5 525 aa31.17■■■□□ 2.58
CHKA-202ENST00000356135 TOGARAM1Q9Y4F4 1720 aa31.17■■■□□ 2.58
CHKA-202ENST00000356135 RXRBP28702 533 aa31.16■■■□□ 2.58
CHKA-202ENST00000356135 ELL2O00472 640 aaPredicted RBP31.15■■■□□ 2.58
CHKA-202ENST00000356135 SLC39A6Q13433 755 aa31.15■■■□□ 2.58
CHKA-202ENST00000356135 TSPYL6Q8N831 410 aa31.15■■■□□ 2.58
CHKA-202ENST00000356135 C8orf58Q8NAV2 365 aa31.15■■■□□ 2.58
CHKA-202ENST00000356135 ACSBG1Q96GR2 724 aa31.15■■■□□ 2.58
CHKA-202ENST00000356135 MRC1P22897 1456 aa31.14■■■□□ 2.58
CHKA-202ENST00000356135 SIPA1L3O60292 1781 aaPredicted RBP31.14■■■□□ 2.58
CHKA-202ENST00000356135 BABAM1Q9NWV8 329 aa31.14■■■□□ 2.58
CHKA-202ENST00000356135 PRIM1P49642 420 aaKnown RBP31.12■■■□□ 2.57
CHKA-202ENST00000356135 SYTL4Q96C24 671 aaPredicted RBP31.12■■■□□ 2.57
CHKA-202ENST00000356135 TMOD3Q9NYL9 352 aa31.11■■■□□ 2.57
CHKA-202ENST00000356135 PIGBQ92521 554 aa31.1■■■□□ 2.57
CHKA-202ENST00000356135 RCAN3Q9UKA8 241 aa31.09■■■□□ 2.57
CHKA-202ENST00000356135 ZNF790Q6PG37 636 aa31.08■■■□□ 2.57
CHKA-202ENST00000356135 SUPT16HQ9Y5B9 1047 aaKnown RBP31.08■■■□□ 2.57
CHKA-202ENST00000356135 DOT1LQ8TEK3 1739 aa31.08■■■□□ 2.57
CHKA-202ENST00000356135 EIF4A1P60842 406 aaKnown RBP31.07■■■□□ 2.56
CHKA-202ENST00000356135 KDM3BQ7LBC6 1761 aa31.07■■■□□ 2.56
CHKA-202ENST00000356135 KCNQ2O43526 872 aa31.07■■■□□ 2.56
CHKA-202ENST00000356135 TWISTNBQ3B726 338 aaPredicted RBP31.07■■■□□ 2.56
CHKA-202ENST00000356135 VAMP4O75379 141 aa31.06■■■□□ 2.56
CHKA-202ENST00000356135 KRT27Q7Z3Y8 459 aa31.05■■■□□ 2.56
CHKA-202ENST00000356135 ITGB4P16144 1822 aa31.05■■■□□ 2.56
CHKA-202ENST00000356135 BRWD3Q6RI45 1802 aa31.05■■■□□ 2.56
CHKA-202ENST00000356135 NEFLP07196 543 aa31.05■■■□□ 2.56
CHKA-202ENST00000356135 KAT6BQ8WYB5 2073 aa31.04■■■□□ 2.56
CHKA-202ENST00000356135 ASAP1Q9ULH1 1129 aa31.03■■■□□ 2.56
CHKA-202ENST00000356135 BCL9O00512 1426 aa31.03■■■□□ 2.56
CHKA-202ENST00000356135 PTF1AQ7RTS3 328 aa31.02■■■□□ 2.56
CHKA-202ENST00000356135 RGS12O14924 1447 aa31.02■■■□□ 2.56
CHKA-202ENST00000356135 TTC5Q8N0Z6 440 aa31.02■■■□□ 2.56
CHKA-202ENST00000356135 ZNF496Q96IT1 587 aaPredicted RBP31.02■■■□□ 2.56
CHKA-202ENST00000356135 TCERG1O14776 1098 aaKnown RBP31.01■■■□□ 2.55
CHKA-202ENST00000356135 ATG3Q9NT62 314 aa31.01■■■□□ 2.55
CHKA-202ENST00000356135 PRAMEF22A3QJZ6 481 aa31■■■□□ 2.55
CHKA-202ENST00000356135 BCAR3O75815 825 aa31■■■□□ 2.55
CHKA-202ENST00000356135 RARSP54136 660 aaKnown RBP31■■■□□ 2.55
CHKA-202ENST00000356135 BCL2L13Q9BXK5 485 aa31■■■□□ 2.55
CHKA-202ENST00000356135 CT47B1P0C2W7 299 aaPredicted RBP30.99■■■□□ 2.55
CHKA-202ENST00000356135 PTCD1O75127 700 aaKnown RBP30.97■■■□□ 2.55
CHKA-202ENST00000356135 NECTIN2Q92692 538 aa30.97■■■□□ 2.55
CHKA-202ENST00000356135 GIGYF1O75420 1035 aaPredicted RBP30.96■■■□□ 2.55
CHKA-202ENST00000356135 FKBP8Q14318 412 aa30.96■■■□□ 2.55
CHKA-202ENST00000356135 SSH1Q8WYL5 1049 aa30.96■■■□□ 2.55
CHKA-202ENST00000356135 RNF123Q5XPI4 1314 aa30.96■■■□□ 2.55
CHKA-202ENST00000356135 HEG1Q9ULI3 1381 aa30.96■■■□□ 2.55
CHKA-202ENST00000356135 FMNL2Q96PY5 1086 aa30.94■■■□□ 2.54
CHKA-202ENST00000356135 PAPPAQ13219 1627 aa30.94■■■□□ 2.54
CHKA-202ENST00000356135 EIF2S2P20042 333 aaKnown RBP30.93■■■□□ 2.54
CHKA-202ENST00000356135 FAM196AQ6ZSG2 479 aa30.92■■■□□ 2.54
CHKA-202ENST00000356135 KCPQ6ZWJ8 1503 aa30.92■■■□□ 2.54
CHKA-202ENST00000356135 PLIN1O60240 522 aa30.91■■■□□ 2.54
CHKA-202ENST00000356135 RBM42Q9BTD8 480 aaKnown RBP30.91■■■□□ 2.54
CHKA-202ENST00000356135 SMC4Q9NTJ3 1288 aa30.91■■■□□ 2.54
CHKA-202ENST00000356135 SNRPA1P09661 255 aaKnown RBP30.89■■■□□ 2.54
CHKA-202ENST00000356135 USP16Q9Y5T5 823 aa30.89■■■□□ 2.54
CHKA-202ENST00000356135 UBR2Q8IWV8 1755 aa30.89■■■□□ 2.53
CHKA-202ENST00000356135 ALDH1L2Q3SY69 923 aa30.88■■■□□ 2.53
CHKA-202ENST00000356135 HDGFL1Q5TGJ6 251 aa30.88■■■□□ 2.53
CHKA-202ENST00000356135 ZNF428Q96B54 188 aa30.88■■■□□ 2.53
CHKA-202ENST00000356135 SLC4A9Q96Q91 983 aa30.87■■■□□ 2.53
CHKA-202ENST00000356135 SBF2Q86WG5 1849 aa30.87■■■□□ 2.53
CHKA-202ENST00000356135 EP400Q96L91 3159 aa30.87■■■□□ 2.53
CHKA-202ENST00000356135 HOXB7P09629 217 aa30.87■■■□□ 2.53
CHKA-202ENST00000356135 MRPL50Q8N5N7 158 aaKnown RBP30.87■■■□□ 2.53
CHKA-202ENST00000356135 NHSQ6T4R5 1651 aa30.87■■■□□ 2.53
CHKA-202ENST00000356135 TRIM37O94972 964 aa30.86■■■□□ 2.53
CHKA-202ENST00000356135 SOS1Q07889 1333 aaPredicted RBP30.86■■■□□ 2.53
CHKA-202ENST00000356135 C5P01031 1676 aa30.85■■■□□ 2.53
CHKA-202ENST00000356135 RRP1P56182 461 aaKnown RBP30.85■■■□□ 2.53
CHKA-202ENST00000356135 FRAT1Q92837 279 aaPredicted RBP30.85■■■□□ 2.53
CHKA-202ENST00000356135 CCDC30Q5VVM6 783 aa30.84■■■□□ 2.53
CHKA-202ENST00000356135 BCL11BQ9C0K0 894 aaPredicted RBP30.84■■■□□ 2.53
CHKA-202ENST00000356135 PALLDQ8WX93 1383 aa30.83■■■□□ 2.53
CHKA-202ENST00000356135 SLC4A2P04920 1241 aa30.82■■■□□ 2.52
CHKA-202ENST00000356135 IRX6P78412 446 aaPredicted RBP30.82■■■□□ 2.52
CHKA-202ENST00000356135 ERICH6BQ5W0A0 696 aa30.82■■■□□ 2.52
CHKA-202ENST00000356135 DNAJC10Q8IXB1 793 aa30.82■■■□□ 2.52
CHKA-202ENST00000356135 NOB1Q9ULX3 412 aaKnown RBP30.82■■■□□ 2.52
CHKA-202ENST00000356135 BTAF1O14981 1849 aa30.81■■■□□ 2.52
CHKA-202ENST00000356135 ANXA1P04083 346 aa30.81■■■□□ 2.52
CHKA-202ENST00000356135 SMARCC1Q92922 1105 aaPredicted RBP30.81■■■□□ 2.52
CHKA-202ENST00000356135 CHPF2Q9P2E5 772 aa30.81■■■□□ 2.52
CHKA-202ENST00000356135 STK31Q9BXU1 1019 aa30.79■■■□□ 2.52
CHKA-202ENST00000356135 LOC102724428A0A0B4J2F2 783 aa30.79■■■□□ 2.52
CHKA-202ENST00000356135 PIP4K2AP48426 406 aaPredicted RBP30.79■■■□□ 2.52
CHKA-202ENST00000356135 SIK1P57059 783 aa30.79■■■□□ 2.52
CHKA-202ENST00000356135 G2E3Q7L622 706 aa30.79■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms