RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 CCDC175P0C221 793 aa14.8□□□□□ -0.04
SYNCRIP-201ENST00000355238 SRGAP3O43295 1099 aa14.8□□□□□ -0.04
SYNCRIP-201ENST00000355238 RAB11FIP3O75154 756 aa14.8□□□□□ -0.04
SYNCRIP-201ENST00000355238 IBSPP21815 317 aaPredicted RBP14.8□□□□□ -0.04
SYNCRIP-201ENST00000355238 ZNF165P49910 485 aa14.8□□□□□ -0.04
SYNCRIP-201ENST00000355238 BMP2KQ9NSY1 1161 aaPredicted RBP14.8□□□□□ -0.04
SYNCRIP-201ENST00000355238 RAI14Q9P0K7 980 aa14.8□□□□□ -0.04
SYNCRIP-201ENST00000355238 USO1O60763 962 aaKnown RBP14.8□□□□□ -0.04
SYNCRIP-201ENST00000355238 NF2P35240 595 aa14.79□□□□□ -0.04
SYNCRIP-201ENST00000355238 STK11IPQ8N1F8 1099 aa14.79□□□□□ -0.04
SYNCRIP-201ENST00000355238 GCOM1H8Y6P7 765 aaPredicted RBP14.79□□□□□ -0.04
SYNCRIP-201ENST00000355238 MYZAPP0CAP1 466 aa14.79□□□□□ -0.04
SYNCRIP-201ENST00000355238 IFFO1Q0D2I5 559 aa14.79□□□□□ -0.04
SYNCRIP-201ENST00000355238 TMC6Q7Z403 805 aa14.79□□□□□ -0.04
SYNCRIP-201ENST00000355238 FEZ1Q99689 392 aa14.79□□□□□ -0.04
SYNCRIP-201ENST00000355238 PTPRGP23470 1445 aa14.79□□□□□ -0.04
SYNCRIP-201ENST00000355238 GLRX3O76003 335 aaKnown RBP14.79□□□□□ -0.04
SYNCRIP-201ENST00000355238 CFAP70Q5T0N1 1121 aa14.79□□□□□ -0.04
SYNCRIP-201ENST00000355238 NAA15Q9BXJ9 866 aaKnown RBP14.79□□□□□ -0.04
SYNCRIP-201ENST00000355238 ARFGAP3Q9NP61 516 aa14.79□□□□□ -0.04
SYNCRIP-201ENST00000355238 EVA1CP58658 441 aa14.79□□□□□ -0.04
SYNCRIP-201ENST00000355238 GIGYF2Q6Y7W6 1299 aaKnown RBP14.79□□□□□ -0.04
SYNCRIP-201ENST00000355238 PANK2Q9BZ23 570 aa14.79□□□□□ -0.04
SYNCRIP-201ENST00000355238 RBM27Q9P2N5 1060 aaKnown RBP14.79□□□□□ -0.04
SYNCRIP-201ENST00000355238 FCHSD2O94868 740 aa14.78□□□□□ -0.04
SYNCRIP-201ENST00000355238 SMARCA4P51532 1647 aa14.78□□□□□ -0.04
SYNCRIP-201ENST00000355238 ARAP1Q96P48 1450 aa14.78□□□□□ -0.04
SYNCRIP-201ENST00000355238 YEATS4O95619 227 aa14.78□□□□□ -0.04
SYNCRIP-201ENST00000355238 KIF1BPQ96EK5 621 aa14.78□□□□□ -0.04
SYNCRIP-201ENST00000355238 SRRTQ9BXP5 876 aaKnown RBP14.78□□□□□ -0.04
SYNCRIP-201ENST00000355238 STX6O43752 255 aa14.78□□□□□ -0.04
SYNCRIP-201ENST00000355238 FKBP15Q5T1M5 1219 aa14.78□□□□□ -0.04
SYNCRIP-201ENST00000355238 IL1RAPL2Q9NP60 686 aa14.78□□□□□ -0.04
SYNCRIP-201ENST00000355238 ABCC11Q96J66 1382 aa14.77□□□□□ -0.04
SYNCRIP-201ENST00000355238 SPECC1LQ69YQ0 1117 aa14.77□□□□□ -0.04
SYNCRIP-201ENST00000355238 MTMR7Q9Y216 660 aa14.77□□□□□ -0.04
SYNCRIP-201ENST00000355238 PSME1Q06323 249 aa14.77□□□□□ -0.04
SYNCRIP-201ENST00000355238 RBM25P49756 843 aaKnown RBP14.77□□□□□ -0.04
SYNCRIP-201ENST00000355238 GPRASP1Q5JY77 1395 aa14.77□□□□□ -0.05
SYNCRIP-201ENST00000355238 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.77□□□□□ -0.052e-12■■■□□ 18.7
SYNCRIP-201ENST00000355238 TMPOP42166 694 aaKnown RBP14.77□□□□□ -0.05
SYNCRIP-201ENST00000355238 PRPF40BQ6NWY9 871 aaKnown RBP14.77□□□□□ -0.05
SYNCRIP-201ENST00000355238 OGFRQ9NZT2 677 aa14.77□□□□□ -0.05
SYNCRIP-201ENST00000355238 PLEKHO1Q53GL0 409 aaPredicted RBP14.76□□□□□ -0.05
SYNCRIP-201ENST00000355238 TMEM132EQ6IEE7 984 aa14.76□□□□□ -0.05
SYNCRIP-201ENST00000355238 HMGB1P09429 215 aaKnown RBP14.76□□□□□ -0.05
SYNCRIP-201ENST00000355238 HCLS1P14317 486 aaPredicted RBP14.76□□□□□ -0.05
SYNCRIP-201ENST00000355238 TBC1D9Q6ZT07 1266 aa14.76□□□□□ -0.05
SYNCRIP-201ENST00000355238 NUP133Q8WUM0 1156 aa14.76□□□□□ -0.05
SYNCRIP-201ENST00000355238 CCDC113Q9H0I3 377 aa14.76□□□□□ -0.05
SYNCRIP-201ENST00000355238 SLC12A5Q9H2X9 1139 aa14.76□□□□□ -0.05
SYNCRIP-201ENST00000355238 U3KPZ7 1027 aaPredicted RBP14.75□□□□□ -0.05
SYNCRIP-201ENST00000355238 KIF20AO95235 890 aa14.75□□□□□ -0.05
SYNCRIP-201ENST00000355238 SLU7O95391 586 aaKnown RBP14.75□□□□□ -0.05
SYNCRIP-201ENST00000355238 SIL1Q9H173 461 aa14.75□□□□□ -0.05
SYNCRIP-201ENST00000355238 ATAD2BQ9ULI0 1458 aa14.75□□□□□ -0.05
SYNCRIP-201ENST00000355238 GNG11P61952 73 aa14.75□□□□□ -0.05
SYNCRIP-201ENST00000355238 SOGA3Q5TF21 947 aa14.75□□□□□ -0.05
SYNCRIP-201ENST00000355238 FSIP1Q8NA03 581 aa14.75□□□□□ -0.05
SYNCRIP-201ENST00000355238 SNX21Q969T3 373 aa14.75□□□□□ -0.05
SYNCRIP-201ENST00000355238 ALS2CR12Q96Q35 445 aa14.75□□□□□ -0.05
SYNCRIP-201ENST00000355238 NUP88Q99567 741 aaPredicted RBP14.75□□□□□ -0.05
SYNCRIP-201ENST00000355238 GDPD2Q9HCC8 539 aa14.75□□□□□ -0.05
SYNCRIP-201ENST00000355238 HSPA4P34932 840 aa14.74□□□□□ -0.05
SYNCRIP-201ENST00000355238 NFE2L2Q16236 605 aa14.74□□□□□ -0.05
SYNCRIP-201ENST00000355238 ZHX3Q9H4I2 956 aa14.74□□□□□ -0.05
SYNCRIP-201ENST00000355238 EXOC6BQ9Y2D4 811 aa14.74□□□□□ -0.05
SYNCRIP-201ENST00000355238 SSH1Q8WYL5 1049 aa14.74□□□□□ -0.05
SYNCRIP-201ENST00000355238 PHAXQ9H814 394 aaKnown RBP14.74□□□□□ -0.05
SYNCRIP-201ENST00000355238 SEPT11Q9NVA2 429 aaKnown RBP14.74□□□□□ -0.05
SYNCRIP-201ENST00000355238 EHBP1Q8NDI1 1231 aa14.74□□□□□ -0.05
SYNCRIP-201ENST00000355238 CCDC12Q8WUD4 166 aaPredicted RBP14.74□□□□□ -0.05
SYNCRIP-201ENST00000355238 SULT6B1Q6IMI4 303 aa14.74□□□□□ -0.05
SYNCRIP-201ENST00000355238 C8orf76Q96K31 380 aa14.74□□□□□ -0.05
SYNCRIP-201ENST00000355238 CFTRP13569 1480 aa14.74□□□□□ -0.05
SYNCRIP-201ENST00000355238 TUBB4BP68371 445 aa14.74□□□□□ -0.05
SYNCRIP-201ENST00000355238 DUSP27Q5VZP5 1158 aa14.74□□□□□ -0.05
SYNCRIP-201ENST00000355238 GNL3LQ9NVN8 582 aaKnown RBP14.74□□□□□ -0.05
SYNCRIP-201ENST00000355238 RSPH14Q9UHP6 348 aa14.74□□□□□ -0.05
SYNCRIP-201ENST00000355238 TTC31Q49AM3 519 aaPredicted RBP14.73□□□□□ -0.05
SYNCRIP-201ENST00000355238 FAM200AQ8TCP9 573 aa14.73□□□□□ -0.05
SYNCRIP-201ENST00000355238 EHBP1L1Q8N3D4 1523 aa14.73□□□□□ -0.05
SYNCRIP-201ENST00000355238 CETN2P41208 172 aa14.73□□□□□ -0.05
SYNCRIP-201ENST00000355238 NUTM1Q86Y26 1132 aa14.73□□□□□ -0.05
SYNCRIP-201ENST00000355238 UBAC1Q9BSL1 405 aa14.73□□□□□ -0.05
SYNCRIP-201ENST00000355238 BCCIPQ9P287 314 aaKnown RBP eCLIP14.73□□□□□ -0.05
SYNCRIP-201ENST00000355238 SPECC1Q5M775 1068 aa14.73□□□□□ -0.05
SYNCRIP-201ENST00000355238 VPS36Q86VN1 386 aa14.73□□□□□ -0.05
SYNCRIP-201ENST00000355238 SKILP12757 684 aa14.73□□□□□ -0.05
SYNCRIP-201ENST00000355238 GJB2P29033 226 aa14.73□□□□□ -0.05
SYNCRIP-201ENST00000355238 FGFR1OPO95684 399 aaKnown RBP14.72□□□□□ -0.05
SYNCRIP-201ENST00000355238 CKAP4Q07065 602 aaKnown RBP14.72□□□□□ -0.05
SYNCRIP-201ENST00000355238 IKQ13123 557 aaPredicted RBP14.72□□□□□ -0.05
SYNCRIP-201ENST00000355238 KLHL10Q6JEL2 608 aa14.72□□□□□ -0.05
SYNCRIP-201ENST00000355238 CNNM1Q9NRU3 951 aa14.72□□□□□ -0.05
SYNCRIP-201ENST00000355238 HSF2BPO75031 334 aa14.72□□□□□ -0.05
SYNCRIP-201ENST00000355238 CNNM3Q8NE01 707 aa14.72□□□□□ -0.05
SYNCRIP-201ENST00000355238 NLRP6P59044 892 aa14.72□□□□□ -0.05
SYNCRIP-201ENST00000355238 CACNA2D4Q7Z3S7 1137 aa14.72□□□□□ -0.05
SYNCRIP-201ENST00000355238 ZNF830Q96NB3 372 aaPredicted RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms