RNA–Protein interactions for RNA: ENST00000355119.8

LIMS2-202, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,045 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-202ENST00000355119 NBPF4Q96M43 638 aa26.93■■□□□ 1.9
LIMS2-202ENST00000355119 APBB1O00213 710 aa26.92■■□□□ 1.9
LIMS2-202ENST00000355119 CHMP4AQ9BY43 222 aa26.92■■□□□ 1.9
LIMS2-202ENST00000355119 OSBPL3Q9H4L5 887 aa26.92■■□□□ 1.9
LIMS2-202ENST00000355119 SDSP20132 328 aa26.91■■□□□ 1.9
LIMS2-202ENST00000355119 NECTIN2Q92692 538 aa26.91■■□□□ 1.9
LIMS2-202ENST00000355119 HDGFL1Q5TGJ6 251 aa26.9■■□□□ 1.9
LIMS2-202ENST00000355119 ATP8B2P98198 1209 aa26.9■■□□□ 1.9
LIMS2-202ENST00000355119 SLIT3O75094 1523 aa26.89■■□□□ 1.9
LIMS2-202ENST00000355119 LMO7Q8WWI1 1683 aa26.89■■□□□ 1.9
LIMS2-202ENST00000355119 K7ELQ4 463 aaPredicted RBP26.89■■□□□ 1.9
LIMS2-202ENST00000355119 HOXB7P09629 217 aa26.89■■□□□ 1.9
LIMS2-202ENST00000355119 KDM3BQ7LBC6 1761 aa26.88■■□□□ 1.89
LIMS2-202ENST00000355119 RABEP1Q15276 862 aa26.87■■□□□ 1.89
LIMS2-202ENST00000355119 PLEKHO1Q53GL0 409 aaPredicted RBP26.87■■□□□ 1.89
LIMS2-202ENST00000355119 USP26Q9BXU7 913 aa26.87■■□□□ 1.89
LIMS2-202ENST00000355119 ZBTB7CA1YPR0 619 aa26.87■■□□□ 1.89
LIMS2-202ENST00000355119 AKAP4Q5JQC9 854 aa26.87■■□□□ 1.89
LIMS2-202ENST00000355119 PDE1AP54750 535 aa26.85■■□□□ 1.89
LIMS2-202ENST00000355119 EIF4A1P60842 406 aaKnown RBP26.85■■□□□ 1.89
LIMS2-202ENST00000355119 NCAPD2Q15021 1401 aa26.85■■□□□ 1.89
LIMS2-202ENST00000355119 AMOTQ4VCS5 1084 aa26.85■■□□□ 1.89
LIMS2-202ENST00000355119 ARHGEF25Q86VW2 580 aa26.85■■□□□ 1.89
LIMS2-202ENST00000355119 LRRCC1Q9C099 1032 aa26.85■■□□□ 1.89
LIMS2-202ENST00000355119 RGPD2P0DJD1 1756 aa26.84■■□□□ 1.89
LIMS2-202ENST00000355119 DDX11L8A8MPP1 907 aa26.83■■□□□ 1.89
LIMS2-202ENST00000355119 GCP02774 474 aa26.83■■□□□ 1.89
LIMS2-202ENST00000355119 ZNF530Q6P9A1 599 aaPredicted RBP26.83■■□□□ 1.89
LIMS2-202ENST00000355119 RBM42Q9BTD8 480 aaKnown RBP26.83■■□□□ 1.89
LIMS2-202ENST00000355119 LGR6Q9HBX8 967 aa26.83■■□□□ 1.89
LIMS2-202ENST00000355119 EXOC6BQ9Y2D4 811 aa26.83■■□□□ 1.89
LIMS2-202ENST00000355119 REC8O95072 547 aa26.83■■□□□ 1.89
LIMS2-202ENST00000355119 CD2BP2O95400 341 aaKnown RBP26.83■■□□□ 1.89
LIMS2-202ENST00000355119 HSP90AA1P07900 732 aaKnown RBP26.83■■□□□ 1.89
LIMS2-202ENST00000355119 ORAI2Q96SN7 254 aa26.83■■□□□ 1.89
LIMS2-202ENST00000355119 IBTKQ9P2D0 1353 aaPredicted RBP26.83■■□□□ 1.89
LIMS2-202ENST00000355119 LRRFIP2Q9Y608 721 aaKnown RBP26.82■■□□□ 1.88
LIMS2-202ENST00000355119 OVOS2A0A0G2JMS6 1433 aa26.82■■□□□ 1.88
LIMS2-202ENST00000355119 UBTFL1P0CB47 393 aaPredicted RBP26.82■■□□□ 1.88
LIMS2-202ENST00000355119 USP44Q9H0E7 712 aa26.82■■□□□ 1.88
LIMS2-202ENST00000355119 SALL3Q9BXA9 1300 aa26.82■■□□□ 1.88
LIMS2-202ENST00000355119 PNMA6EA0A0J9YXQ4 647 aa26.81■■□□□ 1.88
LIMS2-202ENST00000355119 TEFQ10587 303 aa26.81■■□□□ 1.88
LIMS2-202ENST00000355119 LRRC59Q96AG4 307 aaKnown RBP26.81■■□□□ 1.88
LIMS2-202ENST00000355119 KIF1AQ12756 1690 aa26.81■■□□□ 1.88
LIMS2-202ENST00000355119 TRPM3Q9HCF6 1732 aaPredicted RBP26.8■■□□□ 1.88
LIMS2-202ENST00000355119 ERC2O15083 957 aa26.8■■□□□ 1.88
LIMS2-202ENST00000355119 PHAXQ9H814 394 aaKnown RBP26.8■■□□□ 1.88
LIMS2-202ENST00000355119 RAB3GAP1Q15042 981 aa26.79■■□□□ 1.88
LIMS2-202ENST00000355119 SRCIN1Q9C0H9 1055 aa26.79■■□□□ 1.88
LIMS2-202ENST00000355119 CAMTA1Q9Y6Y1 1673 aa26.78■■□□□ 1.88
LIMS2-202ENST00000355119 C1orf141Q5JVX7 400 aa26.78■■□□□ 1.88
LIMS2-202ENST00000355119 BTBD11A6QL63 1104 aa26.77■■□□□ 1.88
LIMS2-202ENST00000355119 EIF2S2P20042 333 aaKnown RBP26.77■■□□□ 1.88
LIMS2-202ENST00000355119 L1TD1Q5T7N2 865 aaKnown RBP26.77■■□□□ 1.88
LIMS2-202ENST00000355119 ANKRD24Q8TF21 1146 aa26.77■■□□□ 1.88
LIMS2-202ENST00000355119 GBP4Q96PP9 640 aa26.77■■□□□ 1.88
LIMS2-202ENST00000355119 RNMTO43148 476 aaKnown RBP26.77■■□□□ 1.88
LIMS2-202ENST00000355119 MX1P20591 662 aa26.77■■□□□ 1.88
LIMS2-202ENST00000355119 TNPO1Q92973 898 aaKnown RBP26.77■■□□□ 1.88
LIMS2-202ENST00000355119 TRAK2O60296 914 aa26.76■■□□□ 1.87
LIMS2-202ENST00000355119 XPCQ01831 940 aaPredicted RBP26.76■■□□□ 1.87
LIMS2-202ENST00000355119 KRT28Q7Z3Y7 464 aa26.76■■□□□ 1.87
LIMS2-202ENST00000355119 PROSER2Q86WR7 435 aaPredicted RBP26.76■■□□□ 1.87
LIMS2-202ENST00000355119 SSH3Q8TE77 659 aa26.76■■□□□ 1.87
LIMS2-202ENST00000355119 STAP2Q9UGK3 403 aa26.76■■□□□ 1.87
LIMS2-202ENST00000355119 BRPF3Q9ULD4 1205 aa26.75■■□□□ 1.87
LIMS2-202ENST00000355119 AOX1Q06278 1338 aa26.75■■□□□ 1.87
LIMS2-202ENST00000355119 TUBGCP6Q96RT7 1819 aa26.75■■□□□ 1.87
LIMS2-202ENST00000355119 MST1RQ04912 1400 aa26.75■■□□□ 1.87
LIMS2-202ENST00000355119 PTMSP20962 102 aa26.75■■□□□ 1.87
LIMS2-202ENST00000355119 CHPF2Q9P2E5 772 aa26.75■■□□□ 1.87
LIMS2-202ENST00000355119 RAB11FIP3O75154 756 aa26.74■■□□□ 1.87
LIMS2-202ENST00000355119 MPRIPQ6WCQ1 1025 aa26.74■■□□□ 1.87
LIMS2-202ENST00000355119 IL27Q8NEV9 243 aa26.74■■□□□ 1.87
LIMS2-202ENST00000355119 LMOD2Q6P5Q4 547 aa26.73■■□□□ 1.87
LIMS2-202ENST00000355119 C1orf167Q5SNV9 1468 aa26.73■■□□□ 1.87
LIMS2-202ENST00000355119 LMTK3Q96Q04 1460 aa26.73■■□□□ 1.87
LIMS2-202ENST00000355119 PXDNQ92626 1479 aa26.73■■□□□ 1.87
LIMS2-202ENST00000355119 KCNQ3O43525 872 aa26.73■■□□□ 1.87
LIMS2-202ENST00000355119 DNAAF4Q8WXU2 420 aa26.73■■□□□ 1.87
LIMS2-202ENST00000355119 POLA2Q14181 598 aa26.72■■□□□ 1.87
LIMS2-202ENST00000355119 FOXD4L1Q9NU39 408 aa26.72■■□□□ 1.87
LIMS2-202ENST00000355119 ST18O60284 1047 aa26.71■■□□□ 1.87
LIMS2-202ENST00000355119 BEND3Q5T5X7 828 aa26.71■■□□□ 1.87
LIMS2-202ENST00000355119 C19orf44Q9H6X5 657 aa26.7■■□□□ 1.86
LIMS2-202ENST00000355119 PPP1R42Q7Z4L9 355 aa26.69■■□□□ 1.86
LIMS2-202ENST00000355119 ESYT1Q9BSJ8 1104 aa26.69■■□□□ 1.86
LIMS2-202ENST00000355119 DBF4Q9UBU7 674 aaPredicted RBP26.69■■□□□ 1.86
LIMS2-202ENST00000355119 PI4KAP2A4QPH2 592 aa26.68■■□□□ 1.86
LIMS2-202ENST00000355119 PI4KAP1Q8N8J0 262 aa26.68■■□□□ 1.86
LIMS2-202ENST00000355119 TSHZ3Q63HK5 1081 aa26.67■■□□□ 1.86
LIMS2-202ENST00000355119 ADCY9O60503 1353 aa26.66■■□□□ 1.86
LIMS2-202ENST00000355119 HEG1Q9ULI3 1381 aa26.66■■□□□ 1.86
LIMS2-202ENST00000355119 ALS2Q96Q42 1657 aa26.66■■□□□ 1.86
LIMS2-202ENST00000355119 PLEKHG5O94827 1062 aa26.66■■□□□ 1.86
LIMS2-202ENST00000355119 ADAMTS7Q9UKP4 1686 aa26.66■■□□□ 1.86
LIMS2-202ENST00000355119 SIPA1L3O60292 1781 aaPredicted RBP26.66■■□□□ 1.86
LIMS2-202ENST00000355119 GOLGA6L3A6NEY3 463 aa26.65■■□□□ 1.86
LIMS2-202ENST00000355119 SURF6O75683 361 aaKnown RBP26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms