RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 TBC1D2Q9BYX2 928 aa19.43■□□□□ 0.7
MBD1-205ENST00000353909 MST1RQ04912 1400 aa19.42■□□□□ 0.7
MBD1-205ENST00000353909 GSPT1P15170 499 aaKnown RBP19.42■□□□□ 0.7
MBD1-205ENST00000353909 CCT4P50991 539 aaKnown RBP19.42■□□□□ 0.7
MBD1-205ENST00000353909 EIF4A1P60842 406 aaKnown RBP19.41■□□□□ 0.7
MBD1-205ENST00000353909 NFKBIBQ15653 356 aa19.41■□□□□ 0.7
MBD1-205ENST00000353909 AKAP4Q5JQC9 854 aa19.41■□□□□ 0.7
MBD1-205ENST00000353909 SLKQ9H2G2 1235 aaPredicted RBP19.41■□□□□ 0.7
MBD1-205ENST00000353909 DEKP35659 375 aaKnown RBP19.4■□□□□ 0.7
MBD1-205ENST00000353909 PLEKHO1Q53GL0 409 aaPredicted RBP19.4■□□□□ 0.7
MBD1-205ENST00000353909 BABAM1Q9NWV8 329 aa19.4■□□□□ 0.7
MBD1-205ENST00000353909 ANXA1P04083 346 aa19.4■□□□□ 0.7
MBD1-205ENST00000353909 MED1Q15648 1581 aaPredicted RBP19.4■□□□□ 0.7
MBD1-205ENST00000353909 TEFQ10587 303 aa19.39■□□□□ 0.7
MBD1-205ENST00000353909 BECN1Q14457 450 aa19.39■□□□□ 0.69
MBD1-205ENST00000353909 TBC1D9Q6ZT07 1266 aa19.39■□□□□ 0.69
MBD1-205ENST00000353909 BTBD11A6QL63 1104 aa19.38■□□□□ 0.69
MBD1-205ENST00000353909 ERBB3P21860 1342 aa19.38■□□□□ 0.69
MBD1-205ENST00000353909 SPRYD3Q8NCJ5 442 aa19.38■□□□□ 0.69
MBD1-205ENST00000353909 CHPF2Q9P2E5 772 aa19.38■□□□□ 0.69
MBD1-205ENST00000353909 NCAPD2Q15021 1401 aa19.37■□□□□ 0.69
MBD1-205ENST00000353909 RNMTO43148 476 aaKnown RBP19.37■□□□□ 0.69
MBD1-205ENST00000353909 KIF1AQ12756 1690 aa19.37■□□□□ 0.69
MBD1-205ENST00000353909 ALS2Q96Q42 1657 aa19.37■□□□□ 0.69
MBD1-205ENST00000353909 CACNA1FO60840 1977 aa19.36■□□□□ 0.69
MBD1-205ENST00000353909 PNMA6EA0A0J9YXQ4 647 aa19.36■□□□□ 0.69
MBD1-205ENST00000353909 GNAI2P04899 355 aa19.36■□□□□ 0.69
MBD1-205ENST00000353909 AMOTQ4VCS5 1084 aa19.36■□□□□ 0.69
MBD1-205ENST00000353909 C1orf141Q5JVX7 400 aa19.36■□□□□ 0.69
MBD1-205ENST00000353909 EXOC6BQ9Y2D4 811 aa19.36■□□□□ 0.69
MBD1-205ENST00000353909 LMO7Q8WWI1 1683 aa19.36■□□□□ 0.69
MBD1-205ENST00000353909 PRAMEF22A3QJZ6 481 aa19.36■□□□□ 0.69
MBD1-205ENST00000353909 CHRNA2Q15822 529 aa19.35■□□□□ 0.69
MBD1-205ENST00000353909 USP44Q9H0E7 712 aa19.35■□□□□ 0.69
MBD1-205ENST00000353909 FRAT2O75474 233 aaPredicted RBP19.35■□□□□ 0.69
MBD1-205ENST00000353909 KDM3BQ7LBC6 1761 aa19.35■□□□□ 0.69
MBD1-205ENST00000353909 NLRP2Q9NX02 1062 aa19.34■□□□□ 0.69
MBD1-205ENST00000353909 SOS1Q07889 1333 aaPredicted RBP19.33■□□□□ 0.69
MBD1-205ENST00000353909 TTC22Q5TAA0 569 aa19.33■□□□□ 0.69
MBD1-205ENST00000353909 LRRFIP2Q9Y608 721 aaKnown RBP19.33■□□□□ 0.69
MBD1-205ENST00000353909 USP35Q9P2H5 1018 aa19.33■□□□□ 0.69
MBD1-205ENST00000353909 RBM25P49756 843 aaKnown RBP19.32■□□□□ 0.68
MBD1-205ENST00000353909 ANTXR1Q9H6X2 564 aa19.32■□□□□ 0.68
MBD1-205ENST00000353909 HMMRO75330 724 aa19.32■□□□□ 0.68
MBD1-205ENST00000353909 CADPS2Q86UW7 1296 aa19.32■□□□□ 0.68
MBD1-205ENST00000353909 PI4KAP2A4QPH2 592 aa19.31■□□□□ 0.68
MBD1-205ENST00000353909 PI4KAP1Q8N8J0 262 aa19.31■□□□□ 0.68
MBD1-205ENST00000353909 GNAI3P08754 354 aa19.31■□□□□ 0.68
MBD1-205ENST00000353909 PROSER3Q2NL68 480 aa19.31■□□□□ 0.68
MBD1-205ENST00000353909 TSHZ3Q63HK5 1081 aa19.31■□□□□ 0.68
MBD1-205ENST00000353909 KIF2CQ99661 725 aa19.31■□□□□ 0.68
MBD1-205ENST00000353909 CAMTA1Q9Y6Y1 1673 aa19.3■□□□□ 0.68
MBD1-205ENST00000353909 CDC45O75419 566 aa19.3■□□□□ 0.68
MBD1-205ENST00000353909 NPHP3Q7Z494 1330 aa19.3■□□□□ 0.68
MBD1-205ENST00000353909 SDSP20132 328 aa19.29■□□□□ 0.68
MBD1-205ENST00000353909 GIGYF1O75420 1035 aaPredicted RBP19.29■□□□□ 0.68
MBD1-205ENST00000353909 NBPF7P0C2Y1 421 aaPredicted RBP19.29■□□□□ 0.68
MBD1-205ENST00000353909 ATP8B2P98198 1209 aa19.29■□□□□ 0.68
MBD1-205ENST00000353909 SLC39A6Q13433 755 aa19.29■□□□□ 0.68
MBD1-205ENST00000353909 DCCP43146 1447 aa19.28■□□□□ 0.68
MBD1-205ENST00000353909 RAPGEF4Q8WZA2 1011 aa19.28■□□□□ 0.68
MBD1-205ENST00000353909 RBM42Q9BTD8 480 aaKnown RBP19.28■□□□□ 0.68
MBD1-205ENST00000353909 HOXB7P09629 217 aa19.28■□□□□ 0.68
MBD1-205ENST00000353909 UBTFL1P0CB47 393 aaPredicted RBP19.28■□□□□ 0.68
MBD1-205ENST00000353909 CSB-PGBD3P0DP91 1061 aa19.28■□□□□ 0.68
MBD1-205ENST00000353909 SRCIN1Q9C0H9 1055 aa19.27■□□□□ 0.68
MBD1-205ENST00000353909 MEGF6O75095 1541 aa19.27■□□□□ 0.67
MBD1-205ENST00000353909 ADCY9O60503 1353 aa19.26■□□□□ 0.67
MBD1-205ENST00000353909 BEND3Q5T5X7 828 aa19.26■□□□□ 0.67
MBD1-205ENST00000353909 DNAAF4Q8WXU2 420 aa19.26■□□□□ 0.67
MBD1-205ENST00000353909 SPATA31A3Q5VYP0 1347 aa19.26■□□□□ 0.67
MBD1-205ENST00000353909 CD2BP2O95400 341 aaKnown RBP19.26■□□□□ 0.67
MBD1-205ENST00000353909 TNS3Q68CZ2 1445 aa19.26■□□□□ 0.67
MBD1-205ENST00000353909 COL18A1P39060 1754 aa19.26■□□□□ 0.67
MBD1-205ENST00000353909 XIRP1Q702N8 1843 aaKnown RBP19.26■□□□□ 0.67
MBD1-205ENST00000353909 PDE1AP54750 535 aa19.25■□□□□ 0.67
MBD1-205ENST00000353909 BRINP3Q76B58 766 aa19.25■□□□□ 0.67
MBD1-205ENST00000353909 PXDNLA1KZ92 1463 aa19.25■□□□□ 0.67
MBD1-205ENST00000353909 HEG1Q9ULI3 1381 aa19.25■□□□□ 0.67
MBD1-205ENST00000353909 NFATC2IPQ8NCF5 419 aa19.24■□□□□ 0.67
MBD1-205ENST00000353909 DBF4Q9UBU7 674 aaPredicted RBP19.24■□□□□ 0.67
MBD1-205ENST00000353909 N4BP2Q86UW6 1770 aaPredicted RBP19.24■□□□□ 0.67
MBD1-205ENST00000353909 KDM6AO15550 1401 aaPredicted RBP19.24■□□□□ 0.67
MBD1-205ENST00000353909 NCOA3Q9Y6Q9 1424 aa19.24■□□□□ 0.67
MBD1-205ENST00000353909 PPP1R42Q7Z4L9 355 aa19.24■□□□□ 0.67
MBD1-205ENST00000353909 LRRCC1Q9C099 1032 aa19.24■□□□□ 0.67
MBD1-205ENST00000353909 PHKG2P15735 406 aa19.23■□□□□ 0.67
MBD1-205ENST00000353909 SIPA1L3O60292 1781 aaPredicted RBP19.23■□□□□ 0.67
MBD1-205ENST00000353909 IL1RAPL2Q9NP60 686 aa19.23■□□□□ 0.67
MBD1-205ENST00000353909 IBTKQ9P2D0 1353 aaPredicted RBP19.23■□□□□ 0.67
MBD1-205ENST00000353909 CRYBG1Q9Y4K1 1723 aa19.22■□□□□ 0.67
MBD1-205ENST00000353909 TATP17735 454 aaPredicted RBP19.22■□□□□ 0.67
MBD1-205ENST00000353909 SALL3Q9BXA9 1300 aa19.22■□□□□ 0.67
MBD1-205ENST00000353909 ZNF335Q9H4Z2 1342 aaPredicted RBP19.22■□□□□ 0.67
MBD1-205ENST00000353909 OVOS2A0A0G2JMS6 1433 aa19.22■□□□□ 0.67
MBD1-205ENST00000353909 KDM4FA0A1W2PPD8 638 aa19.22■□□□□ 0.67
MBD1-205ENST00000353909 CYP27B1O15528 508 aa19.22■□□□□ 0.67
MBD1-205ENST00000353909 MAP3K2Q9Y2U5 619 aa19.22■□□□□ 0.67
MBD1-205ENST00000353909 HSCBQ8IWL3 235 aa19.21■□□□□ 0.67
MBD1-205ENST00000353909 ZNF790Q6PG37 636 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms