RNA–Protein interactions for RNA: ENST00000351266.8

CNTFR-201, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 1,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-201ENST00000351266 ERBB3P21860 1342 aa28.52■■■□□ 2.16
CNTFR-201ENST00000351266 HDGFL1Q5TGJ6 251 aa28.52■■■□□ 2.16
CNTFR-201ENST00000351266 ABCC6O95255 1503 aa28.52■■■□□ 2.16
CNTFR-201ENST00000351266 KDM3BQ7LBC6 1761 aa28.52■■■□□ 2.16
CNTFR-201ENST00000351266 EIF4A1P60842 406 aaKnown RBP28.51■■■□□ 2.16
CNTFR-201ENST00000351266 LGR6Q9HBX8 967 aa28.51■■■□□ 2.16
CNTFR-201ENST00000351266 AXIN2Q9Y2T1 843 aa28.51■■■□□ 2.16
CNTFR-201ENST00000351266 TNS3Q68CZ2 1445 aa28.51■■■□□ 2.15
CNTFR-201ENST00000351266 PLEKHG2Q9H7P9 1386 aa28.5■■■□□ 2.15
CNTFR-201ENST00000351266 F6X3S4 739 aa28.49■■■□□ 2.15
CNTFR-201ENST00000351266 EIF5BO60841 1220 aaKnown RBP28.49■■■□□ 2.15
CNTFR-201ENST00000351266 PLEKHG5O94827 1062 aa28.49■■■□□ 2.15
CNTFR-201ENST00000351266 GNAI3P08754 354 aa28.49■■■□□ 2.15
CNTFR-201ENST00000351266 RNMTO43148 476 aaKnown RBP28.49■■■□□ 2.15
CNTFR-201ENST00000351266 BTBD11A6QL63 1104 aa28.48■■■□□ 2.15
CNTFR-201ENST00000351266 GNAI2P04899 355 aa28.47■■■□□ 2.15
CNTFR-201ENST00000351266 HSPA2P54652 639 aa28.47■■■□□ 2.15
CNTFR-201ENST00000351266 ZC3H6P61129 1189 aaKnown RBP28.47■■■□□ 2.15
CNTFR-201ENST00000351266 NBR1Q14596 966 aa28.47■■■□□ 2.15
CNTFR-201ENST00000351266 RTL5Q5HYW3 569 aaPredicted RBP28.47■■■□□ 2.15
CNTFR-201ENST00000351266 MPRIPQ6WCQ1 1025 aa28.46■■■□□ 2.15
CNTFR-201ENST00000351266 C22orf23Q9BZE7 217 aa28.46■■■□□ 2.15
CNTFR-201ENST00000351266 USP35Q9P2H5 1018 aa28.46■■■□□ 2.15
CNTFR-201ENST00000351266 N4BP2Q86UW6 1770 aaPredicted RBP28.46■■■□□ 2.15
CNTFR-201ENST00000351266 PXDNQ92626 1479 aa28.45■■■□□ 2.14
CNTFR-201ENST00000351266 SLC4A3P48751 1232 aa28.45■■■□□ 2.14
CNTFR-201ENST00000351266 NECTIN2Q92692 538 aa28.45■■■□□ 2.14
CNTFR-201ENST00000351266 MFAP1P55081 439 aaKnown RBP28.44■■■□□ 2.14
CNTFR-201ENST00000351266 RAPGEF4Q8WZA2 1011 aa28.44■■■□□ 2.14
CNTFR-201ENST00000351266 SPATA31A3Q5VYP0 1347 aa28.43■■■□□ 2.14
CNTFR-201ENST00000351266 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.41■■■□□ 2.14
CNTFR-201ENST00000351266 RGPD5Q99666 1765 aa28.41■■■□□ 2.14
CNTFR-201ENST00000351266 ADAMTS7Q9UKP4 1686 aa28.41■■■□□ 2.14
CNTFR-201ENST00000351266 PLEKHM2Q8IWE5 1019 aa28.4■■■□□ 2.14
CNTFR-201ENST00000351266 TATP17735 454 aaPredicted RBP28.39■■■□□ 2.14
CNTFR-201ENST00000351266 DDX17Q92841 729 aaKnown RBP28.39■■■□□ 2.14
CNTFR-201ENST00000351266 NLRP2Q9NX02 1062 aa28.39■■■□□ 2.14
CNTFR-201ENST00000351266 CPDO75976 1380 aa28.39■■■□□ 2.14
CNTFR-201ENST00000351266 COL18A1P39060 1754 aa28.39■■■□□ 2.14
CNTFR-201ENST00000351266 SPG7Q9UQ90 795 aa28.39■■■□□ 2.13
CNTFR-201ENST00000351266 EIF2S2P20042 333 aaKnown RBP28.38■■■□□ 2.13
CNTFR-201ENST00000351266 CDC45O75419 566 aa28.36■■■□□ 2.13
CNTFR-201ENST00000351266 DBF4Q9UBU7 674 aaPredicted RBP28.36■■■□□ 2.13
CNTFR-201ENST00000351266 HEG1Q9ULI3 1381 aa28.36■■■□□ 2.13
CNTFR-201ENST00000351266 XIRP1Q702N8 1843 aaKnown RBP28.36■■■□□ 2.13
CNTFR-201ENST00000351266 RBM25P49756 843 aaKnown RBP28.35■■■□□ 2.13
CNTFR-201ENST00000351266 PHAXQ9H814 394 aaKnown RBP28.35■■■□□ 2.13
CNTFR-201ENST00000351266 CRYBG1Q9Y4K1 1723 aa28.35■■■□□ 2.13
CNTFR-201ENST00000351266 CSB-PGBD3P0DP91 1061 aa28.35■■■□□ 2.13
CNTFR-201ENST00000351266 ATP8B2P98198 1209 aa28.35■■■□□ 2.13
CNTFR-201ENST00000351266 TTC22Q5TAA0 569 aa28.35■■■□□ 2.13
CNTFR-201ENST00000351266 CHPF2Q9P2E5 772 aa28.35■■■□□ 2.13
CNTFR-201ENST00000351266 KCNQ3O43525 872 aa28.34■■■□□ 2.13
CNTFR-201ENST00000351266 SRCIN1Q9C0H9 1055 aa28.34■■■□□ 2.13
CNTFR-201ENST00000351266 SIPA1L3O60292 1781 aaPredicted RBP28.34■■■□□ 2.13
CNTFR-201ENST00000351266 BRINP3Q76B58 766 aa28.33■■■□□ 2.13
CNTFR-201ENST00000351266 UBTFL1P0CB47 393 aaPredicted RBP28.33■■■□□ 2.13
CNTFR-201ENST00000351266 STRCQ7RTU9 1775 aa28.33■■■□□ 2.13
CNTFR-201ENST00000351266 GIGYF1O75420 1035 aaPredicted RBP28.32■■■□□ 2.12
CNTFR-201ENST00000351266 TBC1D9Q6ZT07 1266 aa28.31■■■□□ 2.12
CNTFR-201ENST00000351266 USP44Q9H0E7 712 aa28.31■■■□□ 2.12
CNTFR-201ENST00000351266 DNAAF4Q8WXU2 420 aa28.31■■■□□ 2.12
CNTFR-201ENST00000351266 IFNL2Q8IZJ0 200 aa28.3■■■□□ 2.12
CNTFR-201ENST00000351266 CABLES1Q8TDN4 633 aa28.3■■■□□ 2.12
CNTFR-201ENST00000351266 GSPT1P15170 499 aaKnown RBP28.3■■■□□ 2.12
CNTFR-201ENST00000351266 PHKG2P15735 406 aa28.3■■■□□ 2.12
CNTFR-201ENST00000351266 TBC1D2Q9BYX2 928 aa28.29■■■□□ 2.12
CNTFR-201ENST00000351266 OSBPL3Q9H4L5 887 aa28.28■■■□□ 2.12
CNTFR-201ENST00000351266 LRRFIP2Q9Y608 721 aaKnown RBP28.28■■■□□ 2.12
CNTFR-201ENST00000351266 KDM4FA0A1W2PPD8 638 aa28.28■■■□□ 2.12
CNTFR-201ENST00000351266 HSP90AB1P08238 724 aaKnown RBP28.28■■■□□ 2.12
CNTFR-201ENST00000351266 C16orf71Q8IYS4 520 aaPredicted RBP28.28■■■□□ 2.12
CNTFR-201ENST00000351266 SLC52A2Q9HAB3 445 aa28.28■■■□□ 2.12
CNTFR-201ENST00000351266 MEGF6O75095 1541 aa28.27■■■□□ 2.12
CNTFR-201ENST00000351266 HYPKQ9NX55 129 aa28.27■■■□□ 2.12
CNTFR-201ENST00000351266 SCN11AQ9UI33 1791 aa28.27■■■□□ 2.12
CNTFR-201ENST00000351266 CASC1Q6TDU7 716 aa28.26■■■□□ 2.11
CNTFR-201ENST00000351266 LRRCC1Q9C099 1032 aa28.26■■■□□ 2.11
CNTFR-201ENST00000351266 SLAIN2Q9P270 581 aa28.26■■■□□ 2.11
CNTFR-201ENST00000351266 SOS2Q07890 1332 aaPredicted RBP28.26■■■□□ 2.11
CNTFR-201ENST00000351266 PI4KAP2A4QPH2 592 aa28.26■■■□□ 2.11
CNTFR-201ENST00000351266 SMARCA5O60264 1052 aaPredicted RBP28.26■■■□□ 2.11
CNTFR-201ENST00000351266 BEND3Q5T5X7 828 aa28.26■■■□□ 2.11
CNTFR-201ENST00000351266 PI4KAP1Q8N8J0 262 aa28.26■■■□□ 2.11
CNTFR-201ENST00000351266 CHRNA2Q15822 529 aa28.25■■■□□ 2.11
CNTFR-201ENST00000351266 HDAC5Q9UQL6 1122 aa28.25■■■□□ 2.11
CNTFR-201ENST00000351266 KDM6AO15550 1401 aaPredicted RBP28.24■■■□□ 2.11
CNTFR-201ENST00000351266 APBB1O00213 710 aa28.24■■■□□ 2.11
CNTFR-201ENST00000351266 DCAF5Q96JK2 942 aa28.24■■■□□ 2.11
CNTFR-201ENST00000351266 IBTKQ9P2D0 1353 aaPredicted RBP28.24■■■□□ 2.11
CNTFR-201ENST00000351266 PNMA6EA0A0J9YXQ4 647 aa28.23■■■□□ 2.11
CNTFR-201ENST00000351266 ZNF790Q6PG37 636 aa28.23■■■□□ 2.11
CNTFR-201ENST00000351266 SSH3Q8TE77 659 aa28.23■■■□□ 2.11
CNTFR-201ENST00000351266 PKD1L3Q7Z443 1732 aa28.23■■■□□ 2.11
CNTFR-201ENST00000351266 ALDH1L1O75891 902 aa28.22■■■□□ 2.11
CNTFR-201ENST00000351266 NFKBIBQ15653 356 aa28.22■■■□□ 2.11
CNTFR-201ENST00000351266 ADCY9O60503 1353 aa28.22■■■□□ 2.11
CNTFR-201ENST00000351266 DDX58O95786 925 aaKnown RBP28.22■■■□□ 2.11
CNTFR-201ENST00000351266 EXOC6BQ9Y2D4 811 aa28.22■■■□□ 2.11
CNTFR-201ENST00000351266 MRC1P22897 1456 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 348 ms