RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 ASAP1Q9ULH1 1129 aa22.03■■□□□ 1.12
COPE-202ENST00000349893 WDR90Q96KV7 1748 aa22.03■■□□□ 1.12
COPE-202ENST00000349893 KDRP35968 1356 aa22.02■■□□□ 1.12
COPE-202ENST00000349893 TMOD3Q9NYL9 352 aa22.02■■□□□ 1.12
COPE-202ENST00000349893 PLEKHG2Q9H7P9 1386 aa22.01■■□□□ 1.11
COPE-202ENST00000349893 PCNTO95613 3336 aa22.01■■□□□ 1.11
COPE-202ENST00000349893 EMILIN1Q9Y6C2 1016 aa22.01■■□□□ 1.11
COPE-202ENST00000349893 ATP6V1AP38606 617 aa22■■□□□ 1.11
COPE-202ENST00000349893 TMF1P82094 1093 aa21.99■■□□□ 1.11
COPE-202ENST00000349893 NLGN1Q8N2Q7 840 aa21.99■■□□□ 1.11
COPE-202ENST00000349893 RBM46Q8TBY0 533 aaKnown RBP21.99■■□□□ 1.11
COPE-202ENST00000349893 ATG3Q9NT62 314 aa21.99■■□□□ 1.11
COPE-202ENST00000349893 C4AP0C0L4 1744 aa21.99■■□□□ 1.11
COPE-202ENST00000349893 NMRK2Q9NPI5 230 aa21.98■■□□□ 1.11
COPE-202ENST00000349893 BCS1LQ9Y276 419 aa21.98■■□□□ 1.11
COPE-202ENST00000349893 ARFGEF1Q9Y6D6 1849 aa21.98■■□□□ 1.11
COPE-202ENST00000349893 WASHC2AQ641Q2 1341 aa21.98■■□□□ 1.11
COPE-202ENST00000349893 COL5A3P25940 1745 aaPredicted RBP21.97■■□□□ 1.11
COPE-202ENST00000349893 A0A0G2JLW4 131 aa21.97■■□□□ 1.11
COPE-202ENST00000349893 PHKG2P15735 406 aa21.97■■□□□ 1.11
COPE-202ENST00000349893 ADRA2BP18089 450 aa21.97■■□□□ 1.11
COPE-202ENST00000349893 TRAPPC3LQ5T215 181 aa21.96■■□□□ 1.11
COPE-202ENST00000349893 IFNL2Q8IZJ0 200 aa21.96■■□□□ 1.11
COPE-202ENST00000349893 JMYQ8N9B5 988 aa21.96■■□□□ 1.11
COPE-202ENST00000349893 EYA1Q99502 592 aa21.96■■□□□ 1.11
COPE-202ENST00000349893 RTCBQ9Y3I0 505 aaKnown RBP21.96■■□□□ 1.11
COPE-202ENST00000349893 RC3H1Q5TC82 1133 aaKnown RBP21.95■■□□□ 1.1
COPE-202ENST00000349893 SLC4A9Q96Q91 983 aa21.95■■□□□ 1.1
COPE-202ENST00000349893 CARD14Q9BXL6 1004 aa21.95■■□□□ 1.1
COPE-202ENST00000349893 DPEP1P16444 411 aa21.94■■□□□ 1.1
COPE-202ENST00000349893 KCNA3P22001 575 aa21.94■■□□□ 1.1
COPE-202ENST00000349893 ARHGAP27Q6ZUM4 889 aa21.94■■□□□ 1.1
COPE-202ENST00000349893 CCDC87Q9NVE4 849 aa21.94■■□□□ 1.1
COPE-202ENST00000349893 GYS1P13807 737 aa21.93■■□□□ 1.1
COPE-202ENST00000349893 FSTL1Q12841 308 aa21.93■■□□□ 1.1
COPE-202ENST00000349893 ARHGEF1Q92888 912 aaKnown RBP21.93■■□□□ 1.1
COPE-202ENST00000349893 KLRG1Q96E93 195 aa21.93■■□□□ 1.1
COPE-202ENST00000349893 CNTNAP4Q9C0A0 1308 aa21.93■■□□□ 1.1
COPE-202ENST00000349893 CDCA8Q53HL2 280 aa21.92■■□□□ 1.1
COPE-202ENST00000349893 FCHSD2O94868 740 aa21.91■■□□□ 1.1
COPE-202ENST00000349893 ERVV-2B6SEH9 535 aa21.9■■□□□ 1.1
COPE-202ENST00000349893 RPS6KA4O75676 772 aa21.9■■□□□ 1.1
COPE-202ENST00000349893 C9orf131Q5VYM1 1079 aa21.9■■□□□ 1.1
COPE-202ENST00000349893 MYH14Q7Z406 1995 aaKnown RBP21.9■■□□□ 1.1
COPE-202ENST00000349893 DCAF5Q96JK2 942 aa21.89■■□□□ 1.09
COPE-202ENST00000349893 PPM1GO15355 546 aaPredicted RBP21.88■■□□□ 1.09
COPE-202ENST00000349893 COL13A1Q5TAT6 717 aaPredicted RBP21.88■■□□□ 1.09
COPE-202ENST00000349893 PARP3Q9Y6F1 533 aa21.88■■□□□ 1.09
COPE-202ENST00000349893 TNRC6CQ9HCJ0 1690 aaKnown RBP21.88■■□□□ 1.09
COPE-202ENST00000349893 KCPQ6ZWJ8 1503 aa21.87■■□□□ 1.09
COPE-202ENST00000349893 RFC4P35249 363 aa21.87■■□□□ 1.09
COPE-202ENST00000349893 POLKQ9UBT6 870 aa21.87■■□□□ 1.09
COPE-202ENST00000349893 KDM2BQ8NHM5 1336 aa21.86■■□□□ 1.09
COPE-202ENST00000349893 C16orf71Q8IYS4 520 aaPredicted RBP21.86■■□□□ 1.09
COPE-202ENST00000349893 PIM2Q9P1W9 311 aa21.86■■□□□ 1.09
COPE-202ENST00000349893 HTRA3P83110 453 aa21.85■■□□□ 1.09
COPE-202ENST00000349893 SBF1O95248 1867 aa21.85■■□□□ 1.09
COPE-202ENST00000349893 EIF4A2Q14240 407 aaKnown RBP21.84■■□□□ 1.09
COPE-202ENST00000349893 KDM6AO15550 1401 aaPredicted RBP21.83■■□□□ 1.09
COPE-202ENST00000349893 HSP90AB1P08238 724 aaKnown RBP21.83■■□□□ 1.09
COPE-202ENST00000349893 DALRD3Q5D0E6 543 aaKnown RBP21.83■■□□□ 1.09
COPE-202ENST00000349893 RBM42Q9BTD8 480 aaKnown RBP21.83■■□□□ 1.09
COPE-202ENST00000349893 ADAMTS7Q9UKP4 1686 aa21.82■■□□□ 1.08
COPE-202ENST00000349893 RNF181Q9P0P0 153 aa21.81■■□□□ 1.08
COPE-202ENST00000349893 USP42Q9H9J4 1324 aaKnown RBP21.8■■□□□ 1.08
COPE-202ENST00000349893 ZC3H4Q9UPT8 1303 aaKnown RBP21.8■■□□□ 1.08
COPE-202ENST00000349893 DDR1Q08345 913 aa21.8■■□□□ 1.08
COPE-202ENST00000349893 RRAGCQ9HB90 399 aa21.79■■□□□ 1.08
COPE-202ENST00000349893 TJP1Q07157 1748 aa21.79■■□□□ 1.08
COPE-202ENST00000349893 CRKLP46109 303 aaKnown RBP21.78■■□□□ 1.08
COPE-202ENST00000349893 FKBP8Q14318 412 aa21.78■■□□□ 1.08
COPE-202ENST00000349893 SMC1BQ8NDV3 1235 aa21.78■■□□□ 1.08
COPE-202ENST00000349893 PRELPP51888 382 aa21.77■■□□□ 1.08
COPE-202ENST00000349893 SRP68Q9UHB9 627 aaKnown RBP21.77■■□□□ 1.08
COPE-202ENST00000349893 CABP4P57796 275 aa21.76■■□□□ 1.07
COPE-202ENST00000349893 PLEKHO1Q53GL0 409 aaPredicted RBP21.76■■□□□ 1.07
COPE-202ENST00000349893 POLRMTO00411 1230 aaKnown RBP21.75■■□□□ 1.07
COPE-202ENST00000349893 TM4SF1P30408 202 aa21.75■■□□□ 1.07
COPE-202ENST00000349893 CHRNA5P30532 468 aa21.75■■□□□ 1.07
COPE-202ENST00000349893 AMOTQ4VCS5 1084 aa21.75■■□□□ 1.07
COPE-202ENST00000349893 TNS4Q8IZW8 715 aa21.75■■□□□ 1.07
COPE-202ENST00000349893 NRXN2Q9P2S2 1712 aa21.73■■□□□ 1.07
COPE-202ENST00000349893 ZNF530Q6P9A1 599 aaPredicted RBP21.73■■□□□ 1.07
COPE-202ENST00000349893 DLEC1Q9Y238 1755 aa21.72■■□□□ 1.07
COPE-202ENST00000349893 PTCD1O75127 700 aaKnown RBP21.72■■□□□ 1.07
COPE-202ENST00000349893 INTS5Q6P9B9 1019 aaKnown RBP21.72■■□□□ 1.07
COPE-202ENST00000349893 GLTPD2A6NH11 291 aa21.7■■□□□ 1.06
COPE-202ENST00000349893 MTHFSP49914 203 aa21.7■■□□□ 1.06
COPE-202ENST00000349893 NFATC2IPQ8NCF5 419 aa21.7■■□□□ 1.06
COPE-202ENST00000349893 AFDNP55196 1824 aaKnown RBP21.7■■□□□ 1.06
COPE-202ENST00000349893 SCN11AQ9UI33 1791 aa21.69■■□□□ 1.06
COPE-202ENST00000349893 CAPN15O75808 1086 aa21.69■■□□□ 1.06
COPE-202ENST00000349893 VEGFAP15692 232 aaPredicted RBP21.69■■□□□ 1.06
COPE-202ENST00000349893 LMNB1P20700 586 aa21.69■■□□□ 1.06
COPE-202ENST00000349893 RASSF7Q02833 373 aa21.68■■□□□ 1.06
COPE-202ENST00000349893 TIAM2Q8IVF5 1701 aa21.68■■□□□ 1.06
COPE-202ENST00000349893 SOS1Q07889 1333 aaPredicted RBP21.67■■□□□ 1.06
COPE-202ENST00000349893 HSPA1AP0DMV8 641 aaKnown RBP21.66■■□□□ 1.06
COPE-202ENST00000349893 HSPA1BP0DMV9 641 aaKnown RBP21.66■■□□□ 1.06
COPE-202ENST00000349893 TNNT2P45379 298 aaPredicted RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms